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Abdelilah-Seyfried, Salim

Pattern formation in janus-mutant zebrafish embryos.
Abdelilah, S. and Driever, W.
Developmental Biology 184 (1): 70-84. 1 April 1997

Mutations affecting neural survival in the zebrafish Danio rerio.
Abdelilah, S. and Mountcastle-Shah, E. and Harvey, M. and Solnica-Krezel, L. and Schier, A.F. and Stemple, D.L. and Malicki, J. and Neuhauss, S.C. and Zwartkruis, F. and Stainier, D.Y. and Rangini, Z. and Driever, W.
Development 123 : 217-227. December 1996

Implications for dorsoventral axis determination from the zebrafish mutation janus.
Abdelilah, S. and Solnica-Krezel, L. and Stainier, D.Y. and Driever, W.
Nature 370 (6489): 468-471. 11 August 1994

Claudin-5a in developing zebrafish brain barriers: another brick in the wall.
Abdelilah-Seyfried, S.
BioEssays 32 (9): 768-776. September 2010

Morpholino oligonucleotides, functional genomics by gene 'knock-down'.
Abdelilah-Seyfried, S.
In: Encyclopedic Reference of Genomics and Proteomics in Molecular Medicine ; Vol. 2. Springer, Berlin [u.a.], 1185-1187. ISBN 3-540-44244-8 2006

Bazooka is a permissive factor for the invasive behavior of discs large tumor cells in Drosophila ovarian follicular epithelia.
Abdelilah-Seyfried, S. and Cox, D.N. and Jan, Y.N.
Development 130 (9): 1927-1935. 1 May 2003

Elucidation of megalin/LRP2-dependent endocytic transport processes in the larval zebrafish pronephros.
Anzenberger, U. and Bit-Avragim, N. and Rohr, S. and Rudolph, F. and Dehmel, B. and Willnow, T.E. and Abdelilah-Seyfried, S.
Journal of Cell Science 119 (Pt. 10): 2127-2137. 15 May 2006

Shaping the zebrafish heart: from left-right axis specification to epithelial tissue morphogenesis.
Bakkers, J. and Verhoeven, M.C. and Abdelilah-Seyfried, S.
Developmental Biology 330 (2): 213-220. 15 June 2009

Simultaneous Raman microspectroscopy and fluorescence imaging of bone mineralization in living zebrafish larvae.
Bennet, M. and Akiva, A. and Faivre, D. and Malkinson, G. and Yaniv, K. and Abdelilah-Seyfried, S. and Fratzl, P. and Masic, A.
Biophysical Journal 106 (4): L17-L19. 18 February 2014

Divergent polarization mechanisms during vertebrate epithelial development mediated by the Crumbs complex protein Nagie oko.
Bit-Avragim, N. and Hellwig, N. and Rudolph, F. and Munson, C. and Stainier, D.Y. and Abdelilah-Seyfried, S.
Journal of Cell Science 121 (Pt 15): 2503-2510. 1 August 2008

Nuclear localization of the zebrafish tight junction protein nagie oko.
Bit-Avragim, N. and Rohr, S. and Rudolph, F. and Van der Ven, P. and Furst, D. and Eichhorst, J. and Wiesner, B. and Abdelilah-Seyfried, S.
Developmental Dynamics 237 (1): 83-90. January 2008

In vivo conditions to identify prkci phosphorylation targets using the analog-sensitive kinase method in zebrafish.
Cibrian Uhalte, E. and Kirchner, M. and Hellwig, N. and Allen, J.J. and Donat, S. and Shokat, K.M. and Selbach, M. and Abdelilah-Seyfried, S.
PLoS ONE 7 (6): e40000. 29 June 2012

Cell polarity.
Cibrian-Uhalte, E. and Abdelilah-Seyfried, S.
In: Encyclopedic Reference of Genomics and Proteomics in Molecular Medicine ; Vol. 1. Springer, Berlin [u.a.], 237-243. ISBN 3-540-44244-8 2006

Involvement of zebrafish Na+,K+ ATPase in myocardial cell junction maintenance.
Cibrian-Uhalte, E. and Langenbacher, A. and Shu, X. and Chen, J.N. and Abdelilah-Seyfried, S.
Journal of Cell Biology 176 (2): 223-230. 15 January 2007

Analysis of aPKClambda and aPKCzeta reveals multiple and redundant functions during vertebrate retinogenesis.
Cui, S. and Otten, C. and Rohr, S. and Abdelilah-Seyfried, S. and Link, B.A.
Molecular and Cellular Neuroscience 34 (3): 431-444. March 2007

Blood flow and Bmp signaling control endocardial chamber morphogenesis.
Dietrich, A.C. and Lombardo, V.A. and Veerkamp, J. and Priller, F. and Abdelilah-Seyfried, S.
Developmental Cell 30 (4): 367-377. 25 August 2014

Genetic analysis of pattern formation in the zebrafish neural plate.
Driever, W. and Solnica-Krezel, L. and Abdelilah, S. and Meyer, D. and Stemple, D.
Cold Spring Harbor Symposia on Quantitative Biology 62 : 523-34. 1997

A genetic screen for mutations affecting embryogenesis in zebrafish.
Driever, W. and Solnica-Krezel, L. and Schier, A.F. and Neuhauss, S.C. and Malicki, J. and Stemple, D.L. and Stainier, D.Y. and Zwartkruis, F. and Abdelilah, S. and Rangini, Z. and Belak, J. and Boggs, C.
Development 123 : 37-46. December 1996

Genie: literature-based gene prioritization at multi genomic scale.
Fontaine, J.F. and Priller, F. and Barbosa-Silva, A. and Andrade-Navarro, M.A.
Nucleic Acids Research 39 (Suppl 2): W455-W461. July 2011

Macrophage development from hematopoietic stem cells requires PU.1 coordinated microRNA expression.
Ghani, S. and Riemke, P. and Schoenheit, J. and Lenze, D. and Stumm, J. and Hoogenkamp, M. and Lagendijk, A. and Heinz, S. and Bonifer, C. and Bakkers, J. and Abdelilah-Seyfried, S. and Hummel, M. and Rosenbauer, F.
Blood 118 (8): 2275-2284. 25 August 2011

Apical membrane maturation and cellular rosette formation during morphogenesis of the zebrafish lateral line.
Hava, D. and Forster, U. and Matsuda, M. and Cui, S. and Link, B.A. and Eichhorst, J. and Wiesner, B. and Chitnis, A. and Abdelilah-Seyfried, S.
Journal of Cell Science 122 (Pt 5): 687-695. 1 March 2009

Neuron navigator 3a regulates liver organogenesis during zebrafish embryogenesis.
Klein, C. and Mikutta, J. and Krueger, J. and Scholz, K. and Brinkmann, J. and Liu, D. and Veerkamp, J. and Siegel, D. and Abdelilah-Seyfried, S. and le Noble, F.
Development 138 (10): 1935-1945. 15 May 2011

Loss of Lrp2 in zebrafish disrupts pronephric tubular clearance but not forebrain development.
Kur, E. and Christa, A. and Veth, K.N. and Gajera, C.R. and Andrade-Navarro, M.A. and Zhang, J. and Willer, J.R. and Gregg, R.G. and Abdelilah-Seyfried, S. and Bachmann, S. and Link, B.A. and Hammes, A. and Willnow, T.E.
Developmental Dynamics 240 (6): 1567-1577. June 2011

Regulation of muscle development by DPF3, a novel histone acetylation and methylation reader of the BAF chromatin remodeling complex.
Lange, M. and Kaynak, B. and Foerster, U.B. and Toenjes, M. and Fischer, J.J. and Grimm, C. and Schlesinger, J. and Just, S. and Dunkel, I. and Krueger, T. and Mebus, S. and Lehrach, H. and Lurz, R. and Gobom, J. and Rottbauer, W. and Abdelilah-Seyfried, S. and Sperling, S.
Genes & Development 22 (17): 2370-2384. 1 September 2008

Large-scale zebrafish embryonic heart dissection for transcriptional analysis.
Lombardo, V.A. and Otten, C. and Abdelilah-Seyfried, S.
Journal of Visualized Experiments (95) 12 January 2015

Cell tracking using photoconvertible proteins during zebrafish development.
Lombardo, V.A. and Sporbert, A. and Abdelilah-Seyfried, S.
Journal of Visualized Experiments (67): e4350. 28 September 2012

Mutations affecting development of the zebrafish retina.
Malicki, J. and Neuhauss, S.C. and Schier, A.F. and Solnica-Krezel, L. and Stemple, D.L. and Stainier, D.Y. and Abdelilah, S. and Zwartkruis, F. and Rangini, Z. and Driever, W.
Development 123 : 263-273. December 1996

Mutations affecting development of the zebrafish ear.
Malicki, J. and Schier, A.F. and Solnica-Krezel, L. and Stemple, D.L. and Neuhauss, S.C. and Stainier, D.Y. and Abdelilah, S. and Rangini, Z. and Zwartkruis, F. and Driever, W.
Development 123 : 275-283. December 1996

Regulation of neurocoel morphogenesis by Pard6 gamma b.
Munson, C. and Huisken, J. and Bit-Avragim, N. and Kuo, T. and Dong, P.D. and Ober, E.A. and Verkade, H. and Abdelilah-Seyfried, S. and Stainier, D.Y.
Developmental Biology 324 (1): 41-54. 1 December 2008

Mutations affecting craniofacial development in zebrafish.
Neuhauss, S.C. and Solnica-Krezel, L. and Schier, A.F. and Zwartkruis, F. and Stemple, D.L. and Malicki, J. and Abdelilah, S. and Stainier, D.Y. and Driever, W.
Development 123 : 357-367. December 1996

A novel genetic mechanism regulates dorsolateral hinge-point formation during zebrafish cranial neurulation.
Nyholm, M.K. and Abdelilah-Seyfried, S. and Grinblat, Y.
Journal of Cell Science 122 (Pt 12): 2137-2148. 15 June 2009

Laser-inflicted injury of zebrafish embryonic skeletal muscle.
Otten, C. and Abdelilah-Seyfried, S.
Journal of Visualized Experiments 30 (71): e4351. 30 January 2013

Xirp proteins mark injured skeletal muscle in zebrafish.
Otten, C. and van der Ven, P.F. and Lewrenz, I. and Paul, S. and Steinhagen, A. and Busch-Nentwich, E. and Eichhorst, J. and Wiesner, B. and Stemple, D. and Straehle, U. and Fuerst, D.O. and Abdelilah-Seyfried, S.
PLoS ONE 7 (2): e31041. 15 February 2012

Regulation of β1 integrin-Klf2-mediated angiogenesis by CCM proteins.
Renz, M. and Otten, C. and Faurobert, E. and Rudolph, F. and Zhu, Y. and Boulday, G. and Duchene, J. and Mickoleit, M. and Dietrich, A.C. and Ramspacher, C. and Steed, E. and Manet-Dupe, S. and Benz, A. and Hassel, D. and Vermot, J. and Huisken, J. and Tournier-Lasserve, E. and Felbor, U. and Sure, U. and Albiges-Rizo, C. and Abdelilah-Seyfried, S.
Developmental Cell 32 (2): 181-190. 26 January 2015

Heart and soul/PRKCi and nagie oko/Mpp5 regulate myocardial coherence and remodeling during cardiac morphogenesis.
Rohr, S. and Bit-Avragim, N. and Abdelilah-Seyfried, S.
Development 133 (1): 107-115. January 2006

Asymmetric involution of the myocardial field drives heart tube formation in zebrafish.
Rohr, S. and Otten, C. and Abdelilah-Seyfried, S.
Circulation Research 102 (2): e12-e19. 1 February 2008

Mutations affecting the development of the embryonic zebrafish brain.
Schier, A.F. and Neuhauss, S.C. and Harvey, M. and Malicki, J. and Solnica-Krezel, L. and Stainier, D.Y. and Zwartkruis, F. and Abdelilah, S. and Stemple, D.L. and Rangini, Z. and Yang, H. and Driever, W.
Development 123 : 165-178. December 1996

Non-SMC condensin I complex proteins control chromosome segregation and survival of proliferating cells in the zebrafish neural retina.
Seipold, S. and Priller, F.C. and Goldsmith, P. and Harris, W.A. and Baier, H. and Abdelilah-Seyfried, S.
BMC Developmental Biology 9 (1): 40. 8 July 2009

Mutations affecting cell fates and cellular rearrangements during gastrulation in zebrafish.
Solnica-Krezel, L. and Stemple, D.L. and Mountcastle-Shah, E. and Rangini, Z. and Neuhauss, S.C. and Malicki, J. and Schier, A.F. and Stainier, D.Y. and Zwartkruis, F. and Abdelilah, S. and Driever, W.
Development 123 : 67-80. December 1996

Mutations affecting development of the notochord in zebrafish.
Stemple, D.L. and Solnica-Krezel, L. and Zwartkruis, F. and Neuhauss, S.C. and Schier, A.F. and Malicki, J. and Stainier, D.Y. and Abdelilah, S. and Rangini, Z. and Mountcastle-Shah, E. and Driever, W.
Development 123 : 117-128. December 1996

Lethal giant larvae 2 regulates development of the ciliated organ Kupffer's vesicle.
Tay, H.G. and Schulze, S.K. and Compagnon, J. and Foley, F.C. and Heisenberg, C.P. and Yost, H.J. and Abdelilah-Seyfried, S. and Amack, J.D.
Development 140 (7): 1550-1559. April 2013

Unilateral dampening of Bmp activity by Nodal generates cardiac left-right asymmetry.
Veerkamp, J. and Rudolph, F. and Cseresnyes, Z. and Priller, F. and Otten, C. and Renz, M. and Schaefer, L. and Abdelilah-Seyfried, S.
Developmental Cell 24 (6): 660-667. 25 March 2013

Hematopoietic mutations in the zebrafish.
Weinstein, B.M. and Schier, A.F. and Abdelilah, S. and Malicki, J. and Solnica-Krezel, L. and Stemple, D.L. and Stainier, D.Y. and Zwartkruis, F. and Driever, W. and Fishman, M.C.
Development 123 : 303-309. December 1996

PI4K2β/AP-1-based TGN-endosomal sorting regulates Wnt signaling.
Wieffer, M. and Cibrian Uhalte, E. and Posor, Y. and Otten, C. and Branz, K. and Schuetz, I. and Moessinger, J. and Schu, P. and Abdelilah-Seyfried, S. and Krauss, M. and Haucke, V.
Current Biology 23 (21): 2185-2190. 4 November 2013

The Drosophila LIM-only gene, dLMO, is mutated in Beadex alleles and might represent an evolutionarily conserved function in appendage development.
Zeng, C. and Justice, N.J. and Abdelilah, S. and Chan, Y.M. and Jan, L.Y. and Jan, Y.N.
Proceedings of the National Academy of Sciences of the United States of America 95 (18): 10637-10642. 1 September 1998

Involvement of claudins in zebrafish brain ventricle morphogenesis.
Zhang, J. and Liss, M. and Wolburg, H. and Blasig, I.E. and Abdelilah-Seyfried, S.
Annals of the New York Academy of Sciences 1257 (1): 193-198. June 2012

Establishment of a neuroepithelial barrier by Claudin5a is essential for zebrafish brain ventricular lumen expansion.
Zhang, J. and Piontek, J. and Wolburg, H. and Piehl, C. and Liss, M. and Otten, C. and Christ, A. and Willnow, T.E. and Blasig, I.E. and Abdelilah-Seyfried, S.
Proceedings of the National Academy of Sciences of the United States of America 107 (4): 1425-1430. 26 January 2010

Bmp signaling exerts opposite effects on cardiac differentiation.
de Pater, E. and Ciampricotti, M. and Priller, F. and Veerkamp, J. and Strate, I. and Smith, K. and Lagendijk, A.K. and Schilling, T.F. and Herzog, W. and Abdelilah-Seyfried, S. and Hammerschmidt, M. and Bakkers, J.
Circulation Research 110 (4): 578-587. 17 February 2012

Akalin, Altuna (BIMSB)

Transcriptional features of genomic regulatory blocks.
Akalin, A. and Fredman, D. and Arner, E and Dong, X and Bryne, JC and Suzuki, H. and Daub, CO and Hayashizaki, Y and Lenhard, B
Genome Biology 10 (4): R38. 19 April 2009

Base-pair resolution DNA methylation sequencing reveals profoundly divergent epigenetic landscapes in acute myeloid leukemia.
Akalin, A. and Garrett-Bakelman, F.E. and Kormaksson, M. and Busuttil, J. and Zhang, L. and Khrebtukova, I. and Milne, T.A. and Huang, Y. and Biswas, D. and Hess, J.L. and Allis, C.D. and Roeder, R.G. and Valk, P.J.M. and Loewenberg, B. and Delwel, R. and Fernandez, H.F. and Paietta, E. and Tallman, M.S. and Schroth, G.P. and Mason, C.E. and Melnick, A. and Figueroa, M.E.
PLoS Genetics 8 (6): e1002781. 21 June 2012

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles.
Akalin, A. and Kormaksson, M. and Li, S. and Garrett-Bakelman, F.E. and Figueroa, M.E. and Melnick, A. and Mason, C.E.
Genome Biology 13 (10): R87. 3 October 2012

Computational genomics with R.
Akalin, A.
Chapman and Hall/CRC Computational Biology Series . CRC Press LLC, Milton. ISBN 9781498781855 2020

genomation: a toolkit to summarize, annotate and visualize genomic intervals.
Akalin, A. and Franke, V. and Vlahoviček, K. and Mason, C.E. and Schübeler, D.
Bioinformatics 31 (7): 1127-1129. 1 April 2015

PHF3 regulates neuronal gene expression through the new Pol II CTD reader domain SPOC.
Appel, L.M. and Franke, V. and Bruno, M. and Grishkovskaya, I. and Kasiliauskaite, A. and Schoeberl, U.E. and Puchinger, M.G. and Kostrhon, S. and Beltzung, E. and Mechtler, K. and Lin, G. and Vlasova, A. and Leeb, M. and Pavri, R. and Stark, A. and Akalin, A. and Stefl, R. and Bernecky, C. and Djinovic-Carugo, K. and Slade, D.
bioRxiv : 2020.02.11.943159. 12 February 2020

Zebrafish enhancer detection (ZED) vector: a new tool to facilitate transgenesis and the functional analysis of cis-regulatory regions in zebrafish.
Bessa, J. and Tena, J.J. and de la Calle-Mustienes, E. and Fernandez-Minan, A. and Naranjo, S. and Fernandez, A. and Montoliu, L. and Akalin, A. and Lenhard, B. and Casares, F. and Gomez-Skarmeta, J.L.
Developmental Dynamics 238 (9): 2409-2417. September 2009

DoRiNA 2.0-upgrading the doRiNA database of RNA interactions in post-transcriptional regulation.
Blin, K. and Dieterich, C. and Wurmus, R. and Rajewsky, N. and Landthaler, M. and Akalin, A.
Nucleic Acids Research 43 (Database issue): D160-D167. 28 January 2015

Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments.
Ciolli Mattioli, C. and Rom, A. and Franke, V. and Imami, K. and Arrey, G. and Terne, M. and Woehler, A. and Akalin, A. and Ulitsky, I. and Chekulaeva, M.
Nucleic Acids Research 47 (5): 2560-2573. 18 March 2019

Pdap1 protects mature B lymphocytes from stress-induced cell death and promotes antibody gene diversification.
Delgado-Benito, V. and Berruezo-Llacuna, M. and Altwasser, R. and Winkler, W. and Balasubramanian, S. and Sundaravinayagam, D. and Graf, R. and Rahjouei, A. and Driesner, M. and Keller, L. and Janz, M. and Akalin, A. and Di Virgilio, M.
bioRxiv : 2020.01.30.917062. 31 January 2020

PDGFA-associated protein 1 protects mature B lymphocytes from stress-induced cell death and promotes antibody gene diversification.
Delgado-Benito, V. and Berruezo-Llacuna, M. and Altwasser, R. and Winkler, W. and Sundaravinayagam, D. and Balasubramanian, S. and Caganova, M. and Graf, R. and Rahjouei, A. and Henke, M.T. and Driesner, M. and Keller, L. and Prigione, A. and Janz, M. and Akalin, A. and Di Virgilio, M.
Journal of Experimental Medicine 217 (10): e20200137. 5 October 2020

Nuclear organization in the spinal cord depends on motor neuron lamination orchestrated by catenin and afadin function.
Dewitz, C. and Pimpinella, S. and Hackel, P. and Akalin, A. and Jessell, T.M. and Zampieri, N.
Cell Reports 22 (7): 1681-1694. 13 February 2018

Translog, a web browser for studying the expression divergence of homologous genes.
Dong, X. and Akalin, A. and Sharma, Y. and Lenhard, B.
BMC Bioinformatics 11 (Suppl 1): S59. 18 January 2010

Complex loci in human and mouse genomes.
Engstroem, P.G. and Suzuki, H. and Ninomiya, N. and Akalin, A. and Sessa, L. and Lavorgna, G. and Brozzi, A. and Luzi, L. and Tan, S.L. and Yang, L. and Kunarso, G. and Ng, E.L.C. and Batalov, S. and Wahlestedt, C. and Kai, C. and Kawai, J. and Carninci, P. and Hayashizaki, Y. and Wells, C. and Bajic, V.B. and Orlando, V. and Reid, J.F. and Lenhard, B. and Lipovich, L.
PLoS Genetics 2 (4): 564-577. 28 April 2006

RNA polymerase II primes Polycomb-repressed developmental genes throughout terminal neuronal differentiation.
Ferrai, C. and Torlai Triglia, E. and Risner-Janiczek, J.R. and Rito, T. and Rackham, O.J.L. and De Santiago, I. and Kukalev, A. and Nicodemi, M. and Akalin, A. and Li, M. and Ungless, M.A. and Pombo, A.
Molecular Systems Biology 13 (10): 946. 16 October 2017

Parallel genetics of regulatory sequences in vivo.
Froehlich, J. and Uyar, B. and Herzog, M. and Theil, K. and Glažar, P. and Akalin, A. and Rajewsky, N.
bioRxiv : 2020.07.28.224998. 29 July 2020

Parallel genetics of regulatory sequences using scalable genome editing in vivo.
Froehlich, J.J. and Uyar, B. and Herzog, M. and Theil, K. and Glažar, P. and Akalin, A. and Rajewsky, N.
Cell Reports 35 (2): 108988. 13 April 2021

The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy.
Grüning, B.A. and Fallmann, J. and Yusuf, D. and Will, S. and Erxleben, A. and Eggenhofer, F. and Houwaart, T. and Batut, B. and Videm, P. and Bagnacani, A. and Wolfien, M. and Lott, S.C. and Hoogstrate, Y. and Hess, W.R. and Wolkenhauer, O. and Hoffmann, S. and Akalin, A. and Ohler, U. and Stadler, P.F. and Backofen, R.
Nucleic Acids Research 45 (W1): W560-W566. 3 July 2017

Two independent transcription initiation codes overlap on vertebrate core promoters.
Haberle, V. and Li, N. and Hadzhiev, Y. and Plessy, C. and Previti, C. and Nepal, C. and Gehrig, J. and Dong, X. and Akalin, A. and Suzuki, A.M. and van IJcken, W.F.J. and Armant, O. and Ferg, M. and Strähle, U. and Carninci, P. and Müller, F. and Lenhard, B.
Nature 507 (7492): 381-385. 20 March 2014

Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets via protocol-specific bias modeling.
Karabacak Calviello, A. and Hirsekorn, A. and Wurmus, R. and Yusuf, D. and Ohler, U.
bioRxiv : 284364. 19 March 2018

Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates.
Kikuta, H. and Laplante, M. and Navratilova, P. and Komisarczuk, A.Z. and Engstroem, P.G. and Fredman, D. and Akalin, A. and Caccamo, M. and Sealy, I. and Howe, K. and Ghislain, J. and Pezeron, G. and Mourrain, P. and Ellingsen, S. and Oates, A.C. and Thisse, C. and Thisse, B. and Foucher, I. and Adolf, B. and Geling, A. and Lenhard, B. and Becker, T.S.
Genome Research 17 (5): 545-555. May 2007

Single-nucleus transcriptomics reveals functional compartmentalization in syncytial skeletal muscle cells.
Kim, M. and Franke, V. and Brandt, B. and Lowenstein, E.D. and Schöwel, V. and Spuler, S. and Akalin, A. and Birchmeier, C.
Nature Communications 11 : 6375. 11 December 2020

Single-nucleus transcriptomics reveals functional compartmentalization in syncytial skeletal muscle cells.
Kim, M. and Franke, V. and Brandt, B. and Spuler, S. and Akalin, A. and Birchmeier, C.
bioRxiv : 2020.04.14.041665. 15 April 2020

Transcriptional repression of NFKBIA triggers constitutive IKK- and proteasome-independent p65/RelA activation in senescence.
Kolesnichenko, M. and Mikuda, N. and Höpken, U.E. and Kärgel, E. and Uyar, B. and Tufan, A.B. and Milanovic, M. and Sun, W. and Krahn, I. and Schleich, K. and von Hoff, L. and Hinz, M. and Willenbrock, M. and Jungmann, S. and Akalin, A. and Lee, S. and Schmidt-Ullrich, R. and Schmitt, C.A. and Scheidereit, C.
EMBO Journal 40 (6): e104296. 15 March 2021

A novel IKK- and proteasome-independent mechanism of RelA activation triggers senescence associated secretome via transcriptional repression of NFKBIA.
Kolesnichenko, M. and Mikuda, N. and Höpken, U.E. and Milanovic, M. and Tufan, A.B. and Uyar, B. and Sun, W. and Schleich, K. and von Hoff, L. and Willenbrock, M. and Krahn, I. and Jungmann, S. and Hinz, M. and Akalin, A. and Lee, S. and Schmidt-Ullrich, R. and Schmitt, C.A. and Scheidereit, C.
bioRxiv : 2019.12.19.882225. 20 December 2019

FACT sets a barrier for cell fate reprogramming in Caenorhabditis elegans and human cells.
Kolundzic, E. and Ofenbauer, A. and Bulut, S.I. and Uyar, B. and Baytek, G. and Sommermeier, A. and Seelk, S. and He, M. and Hirsekorn, A. and Vucicevic, D. and Akalin, A. and Diecke, S. and Lacadie, S.A. and Tursun, B.
Developmental Cell 46 (5): 611-626. 10 September 2018

FACT sets a barrier for cell fate reprogramming in C. elegans and human.
Kolundzic, E. and Ofenbauer, A. and Uyar, B. and Sommermeier, A. and Seelk, S. and He, M. and Baytek, G. and Akalin, A. and Diecke, S. and Lacadie, S.A. and Tursun, B.
bioRxiv : 185116. 6 September 2017

Deep learning for genomics using Janggu.
Kopp, W. and Monti, R. and Tamburrini, A. and Ohler, U. and Akalin, A.
Nature Communications 11 (1): 3488. 13 July 2020

Janggu: deep learning for genomics.
Kopp, W. and Monti, R. and Tamburrini, A. and Ohler, U. and Akalin, A.
bioRxiv : 700450. 16 July 2019

Social networks and protest participation: evidence from 130 million Twitter users.
Larson, J.M. and Nagler, J. and Ronen, J. and Tucker, J.A.
American Journal of Political Science 63 (3): 690-705. July 2019

Spatio-temporal, optogenetic control of gene expression in organoids.
Legnini, I. and Emmenegger, L. and Zappulo, A. and Wurmus, R. and Oliveras Martinez, A. and Cerda Jara, C. and Boltengagen, A. and Hessler, T. and Mastrobuoni, G. and Rybak-Wolf, A. and Kempa, S. and Zinzen, R.P. and Woehler, A. and Rajewsky, N.
bioRxiv : 2021.09.26.461850v3. 9 February 2022

Predicting lethal courses in critically ill COVID-19 patients using a machine learning model trained on patients with non-COVID-19 viral pneumonia.
Lichtner, G. and Balzer, F. and Haufe, S. and Giesa, N. and Schiefenhövel, F. and Schmieding, M. and Jurth, C. and Kopp, W. and Akalin, A. and Schaller, S.J. and Weber-Carstens, S. and Spies, C. and von Dincklage, F.
Scientific Reports 11 (1): 13205. 24 June 2021

Induction of sarcomas by mutant IDH2.
Lu, C. and Venneti, S. and Akalin, A. and Fang, F. and Ward, P.S. and Dematteo, R.G. and Intlekofer, A.M. and Chen, C. and Ye, J. and Hameed, M. and Nafa, K. and Agaram, N.P. and Cross, J.R. and Khanin, R. and Mason, C.E. and Healey, J.H. and Lowe, S.W. and Schwartz, G.K. and Melnick, A. and Thompson, C.B.
Genes & Development 27 (18): 1986-1998. 15 September 2013

Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in wildtype and cloche/npas4l mutant zebrafish embryos.
McGarvey, A.C. and Kopp, W. and Vučićević, D. and Kempfer, R. and Mattonet, K. and Hirsekorn, A. and Bilić, I. and Trinks, A. and Merks, A.M. and Panáková, D. and Pombo, A. and Akalin, A. and Junker, J.P. and Stainier, D.Y.R. and Garfield, D. and Ohler, U. and Lacadie, S.A.
bioRxiv : 2020.06.26.173377. 26 June 2020

Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos.
McGarvey, A.C. and Kopp, W. and Vučićević, D. and Mattonet, K. and Kempfer, R. and Hirsekorn, A. and Bilić, I. and Gil, M. and Trinks, A. and Merks, A.M. and Panáková, D. and Pombo, A. and Akalin, A. and Junker, J.P. and Stainier, D.Y.R. and Garfield, D. and Ohler, U. and Lacadie, S.A.
Cell Genomics 2 (1): 100083. 13 January 2022

Mutations in disordered regions can cause disease by creating dileucine motifs.
Meyer, K. and Kirchner, M. and Uyar, B. and Cheng, J.Y. and Russo, G. and Hernandez-Miranda, L.R. and Szymborska, A. and Zauber, H. and Rudolph, I.M. and Willnow, T.E. and Akalin, A. and Haucke, V. and Gerhardt, H. and Birchmeier, C. and Kühn, R. and Krauss, M. and Diecke, S. and Pascual, J.M. and Selbach, M.
Cell 175 (1): 239-253. 20 September 2018

Mutations in disordered regions cause disease by creating endocytosis motifs.
Meyer, K. and Uyar, B. and Kirchner, M. and Cheng, J. and Akalin, A. and Selbach, M.
bioRxiv : 141622. 24 May 2017

The IκB kinase complex is a regulator of mRNA stability.
Mikuda, N. and Kolesnichenko, M. and Beaudette, P. and Popp, O. and Uyar, B. and Sun, W. and Tufan, A.B. and Perder, B. and Akalin, A. and Chen, W. and Mertins, P. and Dittmar, G. and Hinz, M. and Scheidereit, C.
EMBO Journal 37 (24): e98658. 14 December 2018

Deciphering human ribonucleoprotein regulatory networks.
Mukherjee, N. and Wessels, H.H. and Lebedeva, S. and Sajek, M. and Ghanbari, M. and Garzia, A. and Munteanu, A. and Yusuf, D. and Farazi, T. and Hoell, J.I. and Akat, K.M. and Akalin, A. and Tuschl, T. and Ohler, U.
Nucleic Acids Research 47 (2): 570-581. 25 January 2019

Differential evolution of the 13 Atlantic salmon Hox clusters.
Mungpakdee, S. and Seo, H.C. and Angotzi, A.R. and Dong, X. and Akalin, A. and Chourrout, D.
Molecular Biology and Evolution 25 (7): 1333-1343. July 2008

Single-molecule analysis reveals agonist-specific dimer formation of µ-opioid receptors.
Möller, J. and Isbilir, A. and Sungkaworn, T. and Osberg, B. and Karathanasis, C. and Sunkara, V. and Grushevskyi, E.O. and Bock, A. and Annibale, P. and Heilemann, M. and Schütte, C. and Lohse, M.J.
Nature Chemical Biology 16 (9): 946-954. September 2020

The conserved histone chaperone LIN-53 links lifespan and healthspan regulation in C. elegans.
Müthel, S. and Uyar, B. and He, M. and Krause, A. and Vitrinel, B. and Bulut, S. and Vasiljevic, D. and Akalin, A. and Kempa, S. and Tursun, B.
bioRxiv : 539015. 2 February 2019

The conserved histone chaperone LIN-53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans.
Müthel, S. and Uyar, B. and He, M. and Krause, A. and Vitrinel, B. and Bulut, S. and Vasiljevic, D. and Marchal, I. and Kempa, S. and Akalin, A. and Tursun, B.
Aging Cell 18 (6): e13012. December 2019

Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis.
Nepal, C. and Hadzhiev, Y. and Previti, C. and Haberle, V. and Li, N. and Takahashi, H. and Suzuki, A.M.M. and Sheng, Y. and Abdelhamid, R.F. and Anand, S. and Gehrig, J. and Akalin, A. and Kockx, C.E.M. and van der Sloot, A.A.J. and van Ijcken, W.F.J. and Armant, O. and Rastegar, S. and Watson, C. and Strähle, U. and Stupka, E. and Carninci, P. and Lenhard, B. and Müller, F.
Genome Research 23 (11): 1938-1950. November 2013

NanoCAGE analysis of the mouse olfactory epithelium identifies the expression of vomeronasal receptors and of proximal LINE elements.
Pascarella, G. and Lazarevic, D. and Plessy, C. and Bertin, N. and Akalin, A. and Vlachouli, C. and Simone, R. and Faulkner, G.J. and Zucchelli, S. and Kawai, J. and Daub, C.O. and Hayashizaki, Y. and Lenhard, B. and Carninci, P. and Gustincich, S.
Frontiers in Cellular Neuroscience 8 : 41. 18 February 2014

Promoter architecture of mouse olfactory receptor genes.
Plessy, C. and Pascarella, G. and Bertin, N. and Akalin, A. and Carrieri, C. and Vassalli, A. and Lazarevic, D. and Severin, J. and Vlachouli, C. and Simone, R. and Faulkner, G.J. and Kawai, J. and Daub, C.O. and Zucchelli, S. and Hayashizaki, Y. and Mombaerts, P. and Lenhard, B. and Gustincich, S. and Carninci, P.
Genome Research 22 (3): 486-497. March 2012

Cis-regulatory characterization of sequence conservation surrounding the Hox4 genes.
Punnamoottil, B. and Herrmann, C. and Pascual-Anaya, J. and D'Aniello, S. and Garcia-Fernandez, J. and Akalin, A. and Becker, T.S. and Rinkwitz, S.
Developmental Biology 340 (2): 269-282. 15 April 2010

Functional annotation of human long non-coding RNAs via molecular phenotyping.
Ramilowski, J. and Yip, C.W. and Agrawal, S. and Chang, J.C. and Ciani, Y. and Kulakovskiy, I.V. and Mendez, M. and Ooi, J.L.C. and Ouyang, J.F. and Parkinson, N. and Petri, A. and Roos, L. and Severin, J. and Yasuzawa, K. and Abugessaisa, I. and Akalin, A. and Antonov, I. and Arner, E. and Bonetti, A. and Bono, H. and Borsari, B. and Brombacher, F. and Cannistraci, C.V. and Cameron, C.J.F. and Cardenas, R. and Cardon, M. and Chang, H. and Dostie, J. and Ducoli, L. and Favorov, A. and Fort, A. and Garrido, D. and Gil, N. and Gimenez, J. and Guler, R. and Handoko, L. and Harshbarger, J. and Hasegawa, A. and Hasegawa, Y. and Hashimoto, K. and Hayatsu, N. and Heutink, P. and Hirose, T. and Imada, E.L. and Itoh, M. and Kaczkowski, B. and Kanhere, A. and Kawabata, E. and Kawaji, H. and Kawashima, T. and Kelly, T. and Kojima, M. and Kondo, N. and Koseki, H. and Kouno, T. and Kratz, A. and Kurowska-Stolarska, M. and Kwon, A.T.J. and Leek, J. and Lennartsson, A. and Lizio, M. and Lopez, F. and Luginbühl, J. and Maeda, S. and Makeev, V. and Marchionni, L. and Medvedeva, Y.A. and Minoda, A. and Müller, F. and Aguirre, M.M. and Murata, M. and Nishiyori, H. and Nitta, K. and Noguchi, S. and Noro, Y. and Nurtdinov, R. and Okazaki, Y. and Orlando, V. and Paquette, D. and Parr, C. and Rackham, O.J.L. and Rizzu, P. and Sanchez, D.F. and Sandelin, A. and Sanjana, P. and Semple, C.A.M. and Sharma, H. and Shibayama, Y. and Sivaraman, D. and Suzuki, T. and Szumowski, S. and Tagami, M. and Taylor, M.S. and Terao, C. and Thodberg, M. and Thongjuea, S. and Tripathi, V. and Ulitsky, I. and Verardo, R. and Vorontsov, I. and Yamamoto, C. and Young, R.S. and Baillie, J.K. and Forrest, A.R.R. and Guigó, R. and Hoffman, M.M. and Hon, C.C. and Kasukawa, T. and Kauppinen, S. and Kere, J. and Lenhard, B. and Schneider, C. and Suzuki, H. and Yagi, K. and de Hoon, M. and Shin, J.W. and Carninci, P.
bioRxiv : 700864. 18 July 2019

Functional annotation of human long noncoding RNAs via molecular phenotyping.
Ramilowski, J.A. and Yip, C.W. and Agrawal, S. and Chang, J.C. and Ciani, Y. and Kulakovskiy, I.V. and Mendez, M. and Ooi, J.L.C. and Ouyang, J.F. and Parkinson, N. and Petri, A. and Roos, L. and Severin, J. and Yasuzawa, K. and Abugessaisa, I. and Akalin, A. and Antonov, I.V. and Arner, E. and Bonetti, A. and Bono, H. and Borsari, B. and Brombacher, F. and Cameron, C.J.F. and Cannistraci, C.V. and Cardenas, R. and Cardon, M. and Chang, H. and Dostie, J. and Ducoli, L. and Favorov, A. and Fort, A. and Garrido, D. and Gil, N. and Gimenez, J. and Guler, R. and Handoko, L. and Harshbarger, J. and Hasegawa, A. and Hasegawa, Y. and Hashimoto, K. and Hayatsu, N. and Heutink, P. and Hirose, T. and Imada, E.L. and Itoh, M. and Kaczkowski, B. and Kanhere, A. and Kawabata, E. and Kawaji, H. and Kawashima, T. and Kelly, S.T. and Kojima, M. and Kondo, N. and Koseki, H. and Kouno, T. and Kratz, A. and Kurowska-Stolarska, M. and Kwon, A.T.J. and Leek, J. and Lennartsson, A. and Lizio, M. and López-Redondo, F. and Luginbühl, J. and Maeda, S. and Makeev, V.J. and Marchionni, L. and Medvedeva, Y.A. and Minoda, A. and Müller, F. and Muñoz-Aguirre, M. and Murata, M. and Nishiyori, H. and Nitta, K.R. and Noguchi, S. and Noro, Y. and Nurtdinov, R. and Okazaki, Y. and Orlando, V. and Paquette, D. and Parr, C.J.C. and Rackham, O.J.L. and Rizzu, P. and Sánchez Martinez, D.F. and Sandelin, A. and Sanjana, P. and Semple, C.A.M. and Shibayama, Y. and Sivaraman, D.M. and Suzuki, T. and Szumowski, S.C. and Tagami, M. and Taylor, M.S. and Terao, C. and Thodberg, M. and Thongjuea, S. and Tripathi, V. and Ulitsky, I. and Verardo, R. and Vorontsov, I.E. and Yamamoto, C. and Young, R.S. and Baillie, J.K. and Forrest, A.R.R. and Guigó, R. and Hoffman, M.M. and Hon, C.C. and Kasukawa, T. and Kauppinen, S. and Kere, J. and Lenhard, B. and Schneider, C. and Suzuki, H. and Yagi, K. and de Hoon, M.J.L. and Shin, J.W. and Carninci, P.
Genome Research 30 (7): 1060-1072. July 2020

DNA hydroxymethylation profiling reveals that WT1 mutations result in loss of TET2 function in acute myeloid leukemia.
Rampal, R. and Akalin, A. and Madzo, J. and Vasanthakumar, A. and Pronier, E. and Patel, J. and Li, Y. and Ahn, J. and Abdel-Wahab, O. and Shih, A. and Lu, C. and Ward, P.S. and Tsai, J.J. and Hricik, T. and Tosello, V. and Tallman, J.E. and Zhao, X. and Daniels, D. and Dai, Q. and Ciminio, L. and Aifantis, I. and He, C. and Fuks, F. and Tallman, M.S. and Ferrando, A. and Nimer, S. and Paietta, E. and Thompson, C.B. and Licht, J.D. and Mason, C.E. and Godley, L.A. and Melnick, A. and Figueroa, M.E. and Levine, R.L.
Cell Reports 9 (5): 1841-1855. 11 December 2014

Long non-coding RNAs defining major subtypes of B cell precursor acute lymphoblastic leukemia.
Rani James, A. and Schroeder, M.P. and Neumann, M. and Bastian, L. and Eckert, C. and Gökbuget, N. and Tanchez, J.O. and Schlee, C. and Isaakidis, K. and Schwartz, S. and Burmeister, T. and von Stackelberg, A. and Rieger, M.A. and Göllner, S. and Horstman, M. and Schrappe, M. and Kirschner-Schwabe, R. and Brüggemann, M. and Müller-Tidow, C. and Serve, H. and Akalin, A. and Baldus, C.D.
bioRxiv : 365429. 9 July 2018

An atlas of combinatorial transcriptional regulation in mouse and man.
Ravasi, T. and Suzuki, H. and Cannistraci, C.V. and Katayama, S. and Bajic, V.B. and Tan, K. and Akalin, A. and Schmeier, S. and Kanamori-Katayama, M. and Bertin, N. and Carninci, P. and Daub, C.O. and Forrest, A.R.R. and Gough, J. and Grimmond, S. and Han, J.H. and Hashimoto, T. and Hide, W. and Hofmann, O. and Kamburov, A. and Kaur, M. and Kawaji, H. and Kubosaki, A. and Lassmann, T. and van Nimwegen, E. and MacPherson, C.R. and Ogawa, C. and Radovanovic, A. and Schwartz, A. and Teasdale, R.D. and Tegner, J. and Lenhard, B. and Teichmann, S.A. and Arakawa, T. and Ninomiya, N. and Murakami, K. and Tagami, M. and Fukuda, S. and Imamura, K. and Kai, C. and Ishihara, R. and Kitazume, Y. and Kawai, J. and Hume, D.A. and Ideker, T. and Hayashizaki, Y.
Cell 140 (5): 744-752. 5 March 2010

netSmooth: Network-smoothing based imputation for single cell RNA-seq.
Ronen, J. and Akalin, A.
bioRxiv : 234021. 13 December 2017

Evaluation of colorectal cancer subtypes and cell lines using deep learning.
Ronen, J. and Hayat, S. and Akalin, A.
Life Science Alliance 2 (6): 201900517. December 2019

Dissecting the transcriptional regulatory properties of human chromosome 16 highly conserved non-coding regions.
Royo, J.L. and Hidalgo, C. and Roncero, Y. and Seda, M.A. and Akalin, A. and Lenhard, B. and Casares, F. and Gomez-Skarmeta, J.L.
PLoS ONE 6 (9): e24824. 13 September 2011

Pathogenic mutations of human phosphorylation sites affect protein–protein interactions.
Rrustemi, T. and Meyer, K. and Roske, Y. and Uyar, B. and Akalin, A. and Imami, K. and Ishihama, Y. and Daumke, O. and Selbach, M.
Nature Communications 15 (1): 3146. 11 April 2024

Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages.
Schroder, K. and Irvine, K.M. and Taylor, M.S. and Bokil, N.J. and Le Cao, K.A. and Masterman, K.A. and Labzin, L.I. and Semple, C.A. and Kapetanovic, R. and Fairbairn, L. and Akalin, A. and Faulkner, G.J. and Baillie, J.K. and Gongora, M. and Daub, C.O. and Kawaji, H. and McLachlan, G.J. and Goldman, N. and Grimmond, S.M. and Carninci, P. and Suzuki, H. and Hayashizaki, Y. and Lenhard, B. and Hume, D.A. and Sweet, M.J.
Proceedings of the National Academy of Sciences of the United States of America 109 (16): E944-E953. 17 April 2012

SARS-CoV-2 infection dynamics revealed by wastewater sequencing analysis and deconvolution.
Schumann, V.F. and de Castro Cuadrat, R.R. and Wyler, E. and Wurmus, R. and Deter, A. and Quedenau, C. and Dohmen, J. and Faxel, M. and Borodina, T. and Blume, A. and Freimuth, J. and Meixner, M. and Grau, J.H. and Liere, K. and Hackenbeck, T. and Zietzschmann, F. and Gnirss, R. and Böckelmann, U. and Uyar, B. and Franke, V. and Barke, N. and Altmüller, J. and Rajewsky, N. and Landthaler, M. and Akalin, A.
Science of the Total Environment 853 : 158931. 20 December 2022

Crowdsourcing digital health measures to predict Parkinson's disease severity: the Parkinson's Disease Digital Biomarker DREAM Challenge.
Sieberts, S.K. and Schaff, J. and Duda, M. and Pataki, B.Á. and Sun, M. and Snyder, P. and Daneault, J.F. and Parisi, F. and Costante, G. and Rubin, U. and Banda, P. and Chae, Y. and Chaibub Neto, E. and Dorsey, E.R. and Aydın, Z. and Chen, A. and Elo, L.L. and Espino, C. and Glaab, E. and Goan, E. and Golabchi, F.N. and Görmez, Y. and Jaakkola, M.K. and Jonnagaddala, J. and Klén, R. and Li, D. and McDaniel, C. and Perrin, D. and Perumal, T.M. and Rad, N.M. and Rainaldi, E. and Sapienza, S. and Schwab, P. and Shokhirev, N. and Venäläinen, M.S. and Vergara-Diaz, G. and Zhang, Y. and Wang, Y. and Guan, Y. and Brunner, D. and Bonato, P. and Mangravite, L.M. and Omberg, L.
NPJ Digital Medicine 4 (1): 53. 19 March 2021

Scalable workflows and reproducible data analysis for genomics.
Strozzi, F. and Janssen, R. and Wurmus, R. and Crusoe, M.R. and Githinji, G. and Di Tommaso, P. and Belhachemi, D. and Möller, S. and Smant, G. and de Ligt, J. and Prins, P.
Methods in Molecular Biology 1910 : 723-745. 2019

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.
Suzuki, H and Forrest, ARR and van Nimwegen, E and Daub, CO and Balwierz, PJ and Irvine, KM and Lassmann, T and Ravasi, T and Hasegawa, Y and de Hoon, MJL and Katayama, S and Schroder, K and Carninci, P and Tomaru, Y and Kanamori-Katayama, M and Kubosaki, A and Akalin, A. and Ando, Y and Arner, E and Asada, M and Asahara, H and Bailey, T and Bajic, VB and Bauer, D and Beckhouse, AG and Bertin, N and Björkegren, J and Brombacher, F and Bulger, E and Chalk, AM and Chiba, J and Cloonan, N and Dawe, A and Dostie, J and Engstroem, PG and Essack, M and Faulkner, GJ and Fink, JL and Fredman, D and Fujimori, K and Furuno, M and Gojobori, T and Gough, J and Grimmond, SM and Gustafsson, M and Hashimoto, M and Hashimoto, T and Hatakeyama, M and Heinzel, S and Hide, W and Hofmann, O and Hörnquist, M and Huminiecki, L and Ikeo, K and Imamoto, N and Inoue, S and Inoue, Y and Ishihara, R and Iwayanagi, T and Jacobsen, A and Kaur, M and Kawaji, H and Kerr, MC and Kimura, R and Kimura, S and Kimura, Y and Kitano, H and Koga, H and Kojima, T and Kondo, S and Konno, T and Krogh, A and Kruger, A and Kumar, A and Lenhard, B and Lennartsson, A and Lindow, M and Lizio, M and Macpherson, C and Maeda, N and Maher, CA and Maqungo, M and Mar, J and Matigian, NA and Matsuda, H and Mattick, JS and Meier, S and Miyamoto, S and Miyamoto-Sato, E and Nakabayashi, K and Nakachi, Y and Nakano, M and Nygaard, S and Okayama, T and Okazaki, Y and Okuda-Yabukami, H and Orlando, V and Otomo, J and Pachkov, M and Petrovsky, N and Plessy, C and Quackenbush, J and Radovanovic, A and Rehli, M and Saito, R and Sandelin, A and Schmeier, S and Schönbach, C and Schwartz, AS and Semple, CA and Sera, M and Severin, J and Shirahige, K and Simons, C and St Laurent, G and Suzuki, M and Suzuki, T and Sweet, MJ and Taft, RJ and Takeda, S and Takenaka, Y and Tan, K and Taylor, MS and Teasdale, RD and Tegnér, J and Teichmann, S and Valen, E and Wahlestedt, C and Waki, K and Waterhouse, A and Wells, CA and Winther, O and Wu, L and Yamaguchi, K and Yanagawa, H and Yasuda, J and Zavolan, M and Hume, DA and Arakawa, T and Fukuda, S and Imamura, K and Kai, C and Kaiho, A and Kawashima, T and Kawazu, C and Kitazume, Y and Kojima, M and Miura, H and Murakami, K and Murata, M and Ninomiya, N and Nishiyori, H and Noma, S and Ogawa, C and Sano, T and Simon, C and Tagami, M and Takahashi, Y and Kawai, J and Hayashizaki, Y
Nature Genetics 41 (5): 553-562. May 2009

Single-cell analyses of aging, inflammation and senescence.
Uyar, B. and Palmer, D. and Kowald, A. and Escobar, H.M. and Barrantes, I. and Möller, S. and Akalin, A. and Fuellen, G.
Ageing Research Reviews 64 : 101156. December 2020

RCAS: an RNA centric annotation system for transcriptome-wide regions of interest.
Uyar, B. and Yusuf, D. and Wurmus, R. and Rajewsky, N. and Ohler, U. and Akalin, A.
Nucleic Acids Research 45 (10): e91. 2 June 2017

The association between salt taste perception, mediterranean diet and metabolic syndrome: a cross-sectional study.
Veček, N.N. and Mucalo, L. and Dragun, R. and Miličević, T. and Pribisalić, A. and Patarčić, I. and Hayward, C. and Polašek, O. and Kolčić, I.
Nutrients 12 (4): 1164. April 2020

Herpesviral induction of germline transcription factor DUX4 is critical for viral gene expression.
Walter, S. and Franke, V. and Drayman, N. and Wyler, E. and Tay, S. and Landthaler, M. and Akalin, A. and Ensser, A. and Full, F.
bioRxiv : 2021.03.24.436599. 24 March 2021

Cell-type specialization in the brain is encoded by specific long-range chromatin topologies.
Winick-Ng, W. and Kukalev, A. and Harabula, I. and Zea Redondo, L. and Meijer, M. and Serebreni, L. and Bianco, S. and Szabo, D. and Chiariello, A.M. and Irastorza-Azcarate, I. and Fiorillo, L. and Musella, F. and Thieme, C. and Irani, E. and Torlai Triglia, E. and Kolodziejczyk, A.A. and Abentung, A. and Apostolova, G, and Paul, E.J. and Franke, V. and Kempfer, R. and Akalin, A. and Teichmann, S. and Dechant, G. and Ungless, M.A. and Nicodemi, M. and Castelo-Branco, G. and Pombo, A.
bioRxiv : 2020.04.02.020990. 12 May 2021

Cell-type specialization is encoded by specific chromatin topologies.
Winick-Ng, W. and Kukalev, A. and Harabula, I. and Zea-Redondo, L. and Szabó, D. and Meijer, M. and Serebreni, L. and Zhang, Y. and Bianco, S. and Chiariello, A.M. and Irastorza-Azcarate, I. and Thieme, C.J. and Sparks, T.M. and Carvalho, S. and Fiorillo, L. and Musella, F. and Irani, E. and Triglia, E.T. and Kolodziejczyk, A.A. and Abentung, A. and Apostolova, G. and Paul, E.J. and Franke, V. and Kempfer, R. and Akalin, A. and Teichmann, S.A. and Dechant, G. and Ungless, M.A. and Nicodemi, M. and Welch, L. and Castelo-Branco, G. and Pombo, A.
Nature 599 (7886): 684-691. 25 November 2021

HOT or not: Examining the basis of high-occupancy target regions.
Wreczycka, K. and Franke, V. and Uyar, B. and Wurmus, R. and Akalin, A.
bioRxiv : 107680. 31 July 2017

HOT or not: examining the basis of high-occupancy target regions.
Wreczycka, K. and Franke, V. and Uyar, B. and Wurmus, R. and Bulut, S. and Tursun, B. and Akalin, A.
Nucleic Acids Research : gkz460. 20 June 2019

Strategies for analyzing bisulfite sequencing data.
Wreczycka, K. and Gosdschan, A. and Yusuf, D. and Gruening, B. and Assenov, Y. and Akalin, A.
bioRxiv : 109512. 9 August 2017

Strategies for analyzing bisulfite sequencing data.
Wreczycka, K. and Gosdschan, A. and Yusuf, D. and Grüning, B. and Assenov, Y. and Akalin, A.
Journal of Biotechnology 261 : 105-115. 10 November 2017

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Reproducible genomics analysis pipelines with GNU Guix.
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bioRxiv : 298653. 21 April 2018

Single-cell RNA-sequencing of herpes simplex virus 1-infected cells connects NRF2 activation to an antiviral program.
Wyler, E. and Franke, V. and Menegatti, J. and Kocks, C. and Boltengagen, A. and Praktiknjo, S. and Walch-Rückheim, B. and Bosse, J. and Rajewsky, N. and Grässer, F. and Akalin, A. and Landthaler, M.
Nature Communications 10 (1): 4878. 25 October 2019

Single-cell RNA-sequencing of Herpes simplex virus 1-infected cells identifies NRF2 activation as an antiviral program.
Wyler, E. and Franke, V. and Menegatti, J. and Kocks, C. and Boltengagen, A. and Praktiknjo, S. and Walch-Rückheim, B. and Rajewsky, N. and Grässer, F. and Akalin, A. and Landthaler, M.
bioRxiv : 566992. 4 March 2019

Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection.
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Genome Biology 18 (1): 209. 31 October 2017

Bulk and single-cell gene expression profiling of SARS-CoV-2 infected human cell lines identifies molecular targets for therapeutic intervention.
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bioRxiv : 2020.05.05.079194. 5 May 2020

Transcriptomic profiling of SARS-CoV-2 infected human cell lines identifies HSP90 as target for COVID-19 therapy.
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iScience 24 (3): 102151. 19 March 2021

RNA localization is a key determinant of neurite-enriched proteome.
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Nature Communications 8 (1): 583. 19 September 2017

Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma.
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Blood 133 (13): 1489-1494. 28 March 2019

Alexander, Christiane

SLP-2 is required for stress-induced mitochondrial hyperfusion.
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Altmüller, Janine (BIMSB/BIH)

Phenotypic and genetic heterogeneity in a genome-wide linkage study of asthma families.
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BMC Pulmonary Medicine 5 : 1. 5 January 2005

Disease severity-specific neutrophil signatures in blood transcriptomes stratify COVID-19 patients.
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Genome Medicine 13 (1): 7. 13 January 2021

Skeletal dysplasia in a consanguineous clan from the island of Nias/Indonesia is caused by a novel mutation in B3GAT3.
Budde, B.S. and Mizumoto, S. and Kogawa, R. and Becker, C. and Altmüller, J. and Thiele, H. and Rueschendorf, F. and Toliat, M.R. and Kaleschke, G. and Haemmerle, J.M. and Hoehne, W. and Sugahara, K. and Nuernberg, P. and Kennerknecht, I.
Human Genetics 134 (7): 691-704. July 2015

Multiancestry association study identifies new asthma risk loci that colocalize with immune-cell enhancer marks.
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Nature Genetics 50 (1): 42-53. January 2018

Mutant phosphodiesterase 3A protects from hypertension-induced cardiac damage.
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Integrated genomic surveillance enables tracing of person-to-person SARS-CoV-2 transmission chains during community transmission and reveals extensive onward transmission of travel-imported infections, Germany, June to July 2021.
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Eurosurveillance 27 (43): 2101089. 27 October 2022

SORCS2 activity in pancreatic α-cells safeguards insulin granule formation and release from glucose-stressed β-cells.
Kalnytska, O. and Qvist, P. and Kunz, S. and Conrad, T. and Willnow, T.E. and Schmidt, V.
iScience 27 (1): 108725. 19 January 2024

Early IFN-α signatures and persistent dysfunction are distinguishing features of NK cells in severe COVID-19.
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Immunity 54 (11): 2650-2669. 9 November 2021

A genome-wide screen on the genetics of atopy in a multiethnic European population reveals a major atopy locus on chromosome 3q21.3.
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Allergy 60 : 192-199. 1 January 2005

Nuclei isolation from adult mouse kidney for single-nucleus RNA-sequencing.
Leiz, J. and Hinze, C. and Boltengagen, A. and Braeuning, C. and Kocks, C. and Rajewsky, N. and Schmidt-Ott, K.M.
Journal of Visualized Experiments (175): e62901. September 2021

Establishment of gastrointestinal assembloids to study the interplay between epithelial crypts and their mesenchymal niche.
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Nature Communications 14 (1): 3025. 25 May 2023

Platelet-derived factors dysregulate placental sphingosine-1-phosphate receptor 2 in human trophoblasts.
Lyssy, F. and Guettler, J. and Brugger, B.A. and Stern, C. and Forstner, D. and Nonn, O. and Fischer, C. and Herse, F. and Wernitznig, S. and Hirschmugl, B. and Wadsack, C. and Gauster, M.
Reproductive BioMedicine Online 47 (2): 103215. August 2023

Candesartan does not activate PPAR(γ) and its target genes in early gestation trophoblasts.
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International Journal of Molecular Sciences 23 (20): 12326. October 2022

A single-cell RNA labeling strategy for measuring stress response upon tissue dissociation.
Neuschulz, A. and Bakina, O. and Badillo Lisakowski, V. and Olivares-Chauvet, P. and Conrad, T. and Gotthardt, M. and Kettenmann, H. and Junker, J.P.
Molecular Systems Biology 19 (2): e11147. 10 February 2023

Maternal angiotensin increases placental leptin in early gestation via an alternative renin-angiotensin system pathway: suggesting a link to preeclampsia.
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Hypertension 77 (5): 1723-1736. May 2021

The neuroinflammatory interleukin-12 signaling pathway drives Alzheimer's disease-like pathology by perturbing oligodendrocyte survival and neuronal homeostasis.
Schneeberger, S. and Kim, S.J. and Eede, P. and Boltengagen, A. and Braeuning, C. and Andreadou, M. and Becher, B. and Karaiskos, N. and Kocks, C. and Rajewsky, N. and Heppner, F.L.
bioRxiv : 2021.04.25.441313. 27 April 2021

SARS-CoV-2 infection dynamics revealed by wastewater sequencing analysis and deconvolution.
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Science of the Total Environment 853 : 158931. 20 December 2022

Mutant phosphodiesterase 3A protects the kidney from hypertension-induced damage.
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Characterization of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) infection clusters based on integrated genomic surveillance, outbreak analysis and contact tracing in an urban setting.
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Clinical Infectious Diseases 74 (6): 1039-1046. 15 March 2022

Swarm Learning for decentralized and confidential clinical machine learning.
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Nature 594 (7862): 265-270. 10 June 2021

Andrade Navarro, Miguel

Automated genome sequence analysis and annotation.
Andrade, M.A. and Brown, N.P. and Leroy, C. and Hoersch, S. and de Daruvar, A. and Reich, C. and Franchini, A. and Tamames, J. and Valencia, A. and Ouzounis, C. and Sander, C.
Bioinformatics 15 (5): 391-412. May 1999

Stepwise reprogramming of liver cells to a pancreas progenitor state by the transcriptional regulator Tgif2.
Cerdá-Esteban, N. and Naumann, H. and Ruzittu, S. and Mah, N. and Pongrac, I.M. and Cozzitorto, C. and Hommel, A. and Andrade-Navarro, M.A. and Bonifacio, E. and Spagnoli, F.M.
Nature Communications 8 : 14127. 13 February 2017

The soluble intracellular domain of megalin does not affect renal proximal tubular function in vivo.
Christ, A. and Terryn, S. and Schmidt, V. and Christensen, E.I. and Huska, M.R. and Andrade-Navarro, M.A. and Huebner, N. and Devuyst, O. and Hammes, A. and Willnow, T.E.
Kidney International 78 (5): 473-477. September 2010

Genie: literature-based gene prioritization at multi genomic scale.
Fontaine, J.F. and Priller, F. and Barbosa-Silva, A. and Andrade-Navarro, M.A.
Nucleic Acids Research 39 (Suppl 2): W455-W461. July 2011

Emergence and evolution of the renin-angiotensin-aldosterone system.
Fournier, D. and Luft, F.C. and Bader, M. and Ganten, D. and Andrade-Navarro, M.A.
Journal of Molecular Medicine 90 (5): 495-508. May 2012

Systematic association of genes to phenotypes by genome and literature mining.
Korbel, J.O. and Doerks, T. and Jensen, L.J. and Perez-Iratxeta, C. and Kaczanowski, S. and Hooper, S.D. and Andrade, M.A. and Bork, P.
PLoS Biology 3 (5): e134. 5 April 2005

Loss of Lrp2 in zebrafish disrupts pronephric tubular clearance but not forebrain development.
Kur, E. and Christa, A. and Veth, K.N. and Gajera, C.R. and Andrade-Navarro, M.A. and Zhang, J. and Willer, J.R. and Gregg, R.G. and Abdelilah-Seyfried, S. and Bachmann, S. and Link, B.A. and Hammes, A. and Willnow, T.E.
Developmental Dynamics 240 (6): 1567-1577. June 2011

Molecular insights into reprogramming-initiation events mediated by the OSKM gene regulatory network.
Mah, N. and Wang, Y. and Liao, M.C. and Prigione, A. and Jozefczuk, J. and Lichtner, B. and Wolfrum, K. and Haltmeier, M. and Floettmann, M. and Schaefer, M. and Hahn, A. and Mrowka, R. and Klipp, E. and Andrade-Navarro, M.A. and Adjaye, J.
PLoS ONE 6 (8): e24351. 31 August 2011

Gene annotation from scientific literature using mappings between keyword systems.
Perez, A.J. and Perez-Iratxeta, C. and Bork, P. and Thode, G. and Andrade-Navarro, M.A.
Bioinformatics 20 (13): 2084-2091. 1 January 2004

Update of the G2D tool for prioritization of gene candidates to inherited diseases.
Perez-Iratxeta, C. and Bork, P. and Andrade-Navarro, M.A.
Nucleic Acids Research 35 (Web Server Issue): W212-W216. July 2007

Update on XplorMed: a web server for exploring scientific literature.
Perez-Iratxeta, C. and Perez, A.J. and Bork, P. and Andrade-Navarro, M.A.
Nucleic Acids Research 31 (13): 3866-3868. 1 July 2003

G2D: A tool for mining genes associated with disease.
Perez-Iratxeta, C. and Wjst, M. and Bork, P. and Andrade, M.A.
BMC Genetics 6 : 45. 22 August 2005

Mutually exclusive signaling signatures define the hepatic and pancreatic progenitor cell lineage divergence.
Rodríguez-Seguel, E. and Mah, N. and Naumann, H. and Pongrac, I.M. and Cerdá-Esteban, N. and Fontaine, J.F. and Wang, Y. and Chen, W. and Andrade-Navarro, M.A. and Spagnoli, F.M.
Genes & Development 27 (17): 1932-1946. 1 September 2013

CXCL5 limits macrophage foam cell formation in atherosclerosis.
Rousselle, A. and Qadri, F. and Leukel, L. and Yilmaz, R. and Fontaine, J.F. and Sihn, G. and Bader, M. and Ahluwalia, A. and Duchene, J.
Journal of Clinical Investigation 123 (3): 1343-1347. 1 March 2013

Information extraction from full text scientific articles: Where are the keywords?
Shah, P. and Perez-Iratxeta, C. and Bork, P. and Andrade, M.A.
BMC Bioinformatics 4 (1): 20. 29 May 2003

Development and application of a DNA microarray-based yeast two-hybrid system.
Suter, B. and Fontaine, J.F. and Yildirimman, R. and Raskó, T. and Schaefer, M.H. and Rasche, A. and Porras, P. and Vázquez-Álvarez, B.M. and Russ, J. and Rau, K. and Foulle, R. and Zenkner, M. and Saar, K. and Herwig, R. and Andrade-Navarro, M.A. and Wanker, E.E.
Nucleic Acids Research 41 (3): 1496-507. 1 February 2013

A directed protein interaction network for investigating intracellular signal transduction.
Vinayagam, A. and Stelzl, U. and Foulle, R. and Plassmann, S. and Zenkner, M. and Timm, J. and Assmus, H.E. and Andrade-Navarro, M.A. and Wanker, E.E.
Science Signaling 4 (189): rs8. 6 September 2011

Identification of LRRC8 heteromers as an essential component of the volume-regulated anion channel VRAC.
Voss, F.K. and Ullrich, F. and Muench, J. and Lazarow, K. and Lutter, D. and Mah, N. and Andrade-Navarro, M.A. and von Kries, J.P. and Stauber, T. and Jentsch, T.J.
Science 344 (6184): 634-638. 9 May 2014

A roadmap of constitutive NF-κB activity in Hodgkin lymphoma: dominant roles of p50 and p52 revealed by genome-wide analyses.
de Oliveira, K.A.P. and Kaergel, E. and Heinig, M. and Fontaine, J.F. and Patone, G. and Muro, E.M. and Mathas, S. and Hummel, M. and Andrade-Navarro, M.A. and Hübner, N. and Scheidereit, C.
Genome Medicine 8 (1): 28. 17 March 2016

Bader, Michael

Cardiovascular hormone systems.
Bader, M., ed.
Wiley-Blackwell, 1-433. ISBN 9783527319206 10 September 2008

Functional characterization of the human atrial essential myosin light chain (hALC-1) in a transgenic rat model.
Abdelaziz, A.I. and Segaric, J. and Bartsch, H. and Petzhold, D. and Schlegel, W. and Kott, M. and Seefeldt, I. and Klose, J. and Bader, M. and Haase, H. and Morano, I.
Journal of Molecular Medicine 82 (4): 265-274. 1 January 2004

Multichannel SQUID system with integrated magnetic shielding for magnetocardiography of mice.
Ackermann, R. and Wiekhorst, F. and Beck, A. and Gutkelch, D. and Ruede, F. and Schnabel, A. and Steinhoff, U. and Drung, D. and Beyer, J. and Assmann, C. and Trahms, L. and Koch, H. and Schurig, T. and Fischer, R. and Bader, M. and Ogata, H. and Kado, H.
IEEE Transactions on Applied Superconductivity 17 (2): 827-830. June 2007

Restoration of muscle strength in dystrophic muscle by Angiotensin-1-7 through inhibition of TGF-β signaling.
Acuna, M.J. and Pessina, P. and Olguin, H. and Cabrera, D. and Vio, C.P. and Bader, M. and Munoz-Canoves, P. and Santos, R.A. and Cabello-Verrugio, C. and Brandan, E.
Human Molecular Genetics 23 (5): 1237-1249. 1 March 2014

CYP17A1 deficient XY mice display susceptibility to atherosclerosis, altered lipidomic profile and atypical sex development.
Aherrahrou, R. and Kulle, A.E. and Alenina, N. and Werner, R. and Vens-Cappell, S. and Bader, M. and Schunkert, H. and Erdmann, J. and Aherrahrou, Z.
Scientific Reports 10 (1): 8792. 29 May 2020

Angiotensin 1-7 prevents the excessive force loss resulting from 14- and 28-day denervation in mouse EDL and soleus muscle.
Albadrani, H. and Ammar, T. and Bader, M. and Renaud, J.M.
Journal of General Physiology 153 (12): e201912556. 6 December 2021

Angiotensin 1-7 increases fiber cross sectional area and force in juvenile mouse skeletal muscle.
Albadrani, H. and Ammar, T. and Rajgara, R. and Bader, M. and Wiper-Bergeron, N. and Renaud, J.M.
American Journal of Physiology Cell Physiology 323 (6): C1681-C1696. December 2022

Blocking of bradykinin receptor B1 protects from focal closed head injury in mice by reducing axonal damage and astroglia activation.
Albert-Weissenberger, C. and Stetter, C. and Meuth, S.G. and Goebel, K. and Bader, M. and Siren, A.L. and Kleinschnitz, C.
Journal of Cerebral Blood Flow and Metabolism 32 (9): 1747-1756. September 2012

Specification and differentiation of serotonergic neurons.
Alenina, N. and Bashammakh, S. and Bader, M.
Stem Cell Reviews 2 (1): 5-10. March 2006

Growth retardation and altered autonomic control in mice lacking brain serotonin.
Alenina, N. and Kikic, D. and Todiras, M. and Mosienko, V. and Qadri, F. and Plehm, R. and Boye, P. and Vilianovitch, L. and Sohr, R. and Tenner, K. and Hoertnagl, H. and Bader, M.
Proceedings of the National Academy of Sciences of the United States of America 106 (25): 10332-10337. 23 June 2009

The role of serotonin in adult hippocampal neurogenesis.
Alenina, N. and Klempin, F.
Behavioural Brain Research 277 : 49-57. 15 January 2015

Genetically altered animal models for Mas and Angiotensin-(1-7).
Alenina, N. and Xu, P. and Rentzsch, B. and Patkin, E.L. and Bader, M.
Experimental Physiology 93 (5): 528-537. May 2008

Angiotensin-(1-7) and Mas: a brief history.
Alenina, N. and dos Santos, R.A.
In: The Protective Arm of the Renin Angiotensin System (RAS). Elsevier, Amsterdam, NL, 155-159. ISBN 9780128013649 2015

Transgenic animal models for the functional analysis of ACE2.
Alenina, N. and Bader, M.
In: Angiotensin : from the kidney to coronavirus. Molecular Mediators in Health and Disease: How Cells Communicate . Elsevier / Academic Press, London, 491-503. ISBN 978-0-323-99618-1 2023

ACE2 in brain physiology and pathophysiology: evidence from transgenic animal models.
Alenina, N. and Bader, M.
Neurochemical Research 44 (6): 1323-1329. June 2019

Genetic models.
Alenina, N. and Bader, M.
In: Angiotensin-(1-7) : a comprehensive review. Springer, Cham, 35-51. ISBN 978-3-030-22695-4 2019

Multiple non-coding exons and alternative splicing in the mouse Mas protooncogene.
Alenina, N. and Böhme, I. and Bader, M. and Walther, T.
Gene 568 (2): 155-164. 1 September 2015

Inter-individual and inter-strain differences in cognitive and social abilities of Dark Agouti and Wistar Han rats.
Alonso, L. and Peeva, P. and Ramos-Prats, A. and Alenina, N. and Winter, Y. and Rivalan, M.
bioRxiv : bioRxiv:566877. 23 April 2019

Constitutive depletion of brain serotonin differentially affects rats’ social and cognitive abilities.
Alonso, L. and Peeva, P. and Stasko, S. and Bader, M. and Alenina, N. and Winter, Y. and Rivalan, M.
iScience 26 (2): 105998. 17 February 2023

Increased aortic intimal proliferation due to MasR deletion in vitro.
Alsaadon, H. and Kruzliak, P. and Smardencas, A. and Hayes, A. and Bader, M. and Angus, P. and Herath, C. and Zulli, A.
International Journal of Experimental Pathology 96 (3): 183-187. June 2015

Hemodynamic phenotyping of transgenic rats with ubiquitous expression of an angiotensin-(1-7)-producing fusion protein.
Alves, D.T. and Mendes, L.F. and Sampaio, W.O. and Coimbra-Campos, L.M.C. and Vieira, M.A.R. and Ferreira, A.J. and Martins, A.S. and Popova, E. and Todiras, M. and Qadri, F. and Alenina, N. and Bader, M. and Santos, R.A.S. and Campagnole-Santos, M.J.
Clinical Science 135 (18): 2197-2216. 8 September 2021

Kinin B1 receptor controls maternal adiponectin levels and influences offspring weight gain.
Alves-Silva, T. and Húngaro, T.G.R. and Freitas-Lima, L.C. and de Melo Arthur, G. and Arruda, A.C. and Santos, R.B. and Oyama, L.M. and Mori, M.A.S. and Bader, M. and Araujo, R.C.
iScience 26 (12): 108409. 15 December 2023

Genetically altered animals in the study of the metabolic functions of peptide hormone systems.
Alves-da-Silva Mori, M. and Bader, M. and Pesquero, J.B.
Current Opinion in Nephrology and Hypertension 17 (1): 11-17. January 2008

Vitamin D depletion aggravates hypertension and target-organ damage.
Andersen, L.B. and Przybyl, L. and Haase, N. and von Versen-Höynck, F. and Qadri, F. and Jørgensen, J.S. and Sorensen, G.L. and Fruekilde, P. and Poglitsch, M. and Szijártó, I. and Gollasch, M. and Peters, J. and Muller, D.N. and Christesen, H.T. and Dechend, R.
Journal of the American Heart Association 4 (2): e001417. February 2015

Expression and functional pharmacology of the bradykinin B1 receptor in the normal and inflamed human gallbladder.
Andre, E. and Gazzieri, D. and Bardella, E. and Ferreira, J. and Mori, M.A. and Saul, V.V. and Bader, M. and Calixto, J.B. and De Giorgio, R. and Corinaldesi, R. and Geppetti, P. and Trevisani, M.
Gut 57 (5): 628-633. May 2008

Carbon-mixed dental cement for fixing fiber optic ferrules prevents visually triggered locomotive enhancement in mice upon optogenetic stimulation.
Araragi, N. and Alenina, N. and Bader, M.
Heliyon 8 (1): e08692. January 2022

Tonin expression in the rat brain and tonin-mediated central production of angiotensin II.
Araujo, R.C. and Lima, M.P. and Lomez, E.S.L. and Bader, M. and Pesquero, J.B. and Sumitani, M. and Pesquero, J.L.
Physiology & Behavior 76 (2): 327-333. 1 June 2002

Role of the kinin B1 receptor in insulin homeostasis and pancreatic islet function.
Araújo, R.C. and Mori, M.A. and Merino, V.F. and Bascands, J.L. and Schanstra, J.P. and Zollner, R.L. and Villela, C.A. and Nakaie, C.R. and Paiva, A.C. and Pesquero, J.L. and Bader, M. and Pesquero, J.B.
Biological Chemistry 387 (4): 431-436. April 2006

Role of kinin B1 and B2 receptors in the development of pilocarpine model of epilepsy.
Arganaraz, G.A. and Perosa, S.R. and Lencioni, E.C. and Bader, M. and Cavalheiro, E.A. and da Graca Naffah-Mazzacoratti, M. and Pesquero, J.B. and Silva, J.A.
Brain Research 1013 (1): 30-39. 1 January 2004

The synthesis and distribution of the kinin B1 and B2 receptors are modified in the hippocampus of rats submitted to pilocarpine model of epilepsy.
Arganaraz, G.A. and Silva, J.A. and Perosa, S.R. and Pessoa, L.G. and Carvalho, F.F. and Bascands, J.L. and Bader, M. and Trindade, E.D. and Amado, D. and Cavalheiro, E.A. and Pesquero, J.B. and Naffah-Mazzacoratti, M.D.
Brain Research 1006 (1): 114-125. 1 January 2004

Kinin B1 receptor modulates mitochondrial activity responsivity in fasting and voluntary exercise.
Arruda, A.C. and Budu, A. and de Menezes, T.N. and Bader, M. and Araujo, R.C. and Freitas-Lima, L.C.
Life Sciences 309 : 121034. 15 November 2022

Pioglitazone prevents capillary rarefaction in streptozotocin-diabetic rats independently of glucose control and vascular endothelial growth factor expression.
Ashoff, A. and Qadri, F. and Eggers, R. and Joehren, O. and Raasch, W. and Dendorfer, A.
Journal of Vascular Research 49 (3): 260-266. May 2012

Blockade of bradykinin receptor B1 but not bradykinin receptor B2 provides protection from cerebral infarction and brain edema.
Austinat, M. and Braeuninger, S. and Pesquero, J.B. and Brede, M. and Bader, M. and Stoll, G. and Renne, T. and Kleinschnitz, C.
Stroke 40 (1): 285-293. January 2009

Quantifying the impact of gut microbiota on inflammation and hypertensive organ damage.
Avery, E.G. and Bartolomaeus, H. and Rauch, A. and Chen, C.Y. and N'Diaye, G. and Löber, U. and Bartolomaeus, T.U.P. and Fritsche-Guenther, R. and Rodrigues, A.F. and Yarritu, A. and Zhong, C. and Fei, L. and Tsvetkov, D. and Todiras, M. and Park, J.K. and Markó, L. and Maifeld, A. and Patzak, A. and Bader, M. and Kempa, S. and Kirwan, J.A. and Forslund, S.K. and Müller, D.N. and Wilck, N.
Cardiovascular Research 119 (6): 1441-1452. May 2023

GPER activation attenuates cardiac dysfunction by upregulating the SIRT1/3-AMPK-UCP2 pathway in postmenopausal diabetic rats.
Azizian, H. and Farhadi, Z. and Bader, M. and Ghalenoei, J.A. and Ghafari, M.A. and Mahmoodzadeh, S.
PLoS ONE 18 (12): e0293630. 22 December 2023

Renal effects of Tamm-Horsfall protein (uromodulin) deficiency in mice.
Bachmann, S. and Mutig, K. and Bates, J. and Welker, P. and Geist, B. and Gross, V. and Luft, F.C. and Alenina, N. and Bader, M. and Thiele, B.J. and Prasadan, K. and Raffi, H.S. and Kumar, S.
American Journal of Physiology Renal Physiology 288 (3): F559-F567. 1 January 2005

Renal gene expression profiling using kinin B1 and B2 receptor knockout mice reveals comparable modulation of functionally related genes.
Bachvarov, D. and Bachvarova, M. and Koumangaye, R. and Klein, J. and Pesquero, J.B. and Neau, E. and Bader, M. and Schanstra, J.P. and Bascands, J.L.
Biological Chemistry 387 (1): 15-22. January 2006

ACE2, angiotensin-(1-7), and Mas: the other side of the coin.
Bader, M.
Pfluegers Archiv European Journal of Physiology 465 (1): 79-85. January 2013

Kinins.
Bader, M.
de Gruyter. ISBN 978-3-11-025234-7 November 2011

Kinins: History and outlook.
Bader, M.
In: Kinins. de Gruyter, 1-6. ISBN 978-3-11-025234-7 November 2011

Rat models of cardiovascular diseases.
Bader, M.
Methods in Molecular Biology 597 : 403-414. 2010

Tissue renin-angiotensin-aldosterone systems: Targets for pharmacological therapy.
Bader, M.
Annual Review of Pharmacology and Toxicology 50 : 439-65. 2010

Kallikrein-kinin system in neovascularization.
Bader, M.
Arteriosclerosis Thrombosis and Vascular Biology 29 (5): 617-619. May 2009

Highlights of the 13th Annual Meeting of the European Council for Cardiovascular Research. 13th Annual Meeting of the European Council for Cardiovascular Research (ECCR). Nice, France, 10-12 October, 2008.
Bader, M.
Future Cardiology 5 (1): 23-25. January 2009

Preface.
Bader, M.
Cardiovascular Hormone Systems : xvii-xviii. 10 September 2008

Serotonin.
Bader, M.
In: Cardiovascular Hormone Systems. Wiley-Blackwell, 209-231. ISBN 9783527319206 10 September 2008

KININ2007: Comeback for kinins.
Bader, M.
International Immunopharmacology 8 (2): 133-134. February 2008

The second life of the (pro)renin receptor.
Bader, M.
Journal of the Renin Angiotensin Aldosterone System 8 (4): 205-208. December 2007

Renin.
Bader, M.
In: xPharm: The Comprehensive Pharmacology Reference. UNSPECIFIED, 1-10. ISBN 978-0-08-055232-3 2007

Mouse knockout models of hypertension.
Bader, M.
In: Hypertension: Methods and Protocols. Methods in Molecular Medicine ; 108 . Humana Press, Totowa (NJ), 17-32. ISBN 1543-1894 25 October 2004

Role of local renin angiotensin systems in cardiac damage.
Bader, M.
In: Renin Angiotensin System and the Heart. John Wiley & Sons, 47-62. ISBN 9780470862926 2004

Mas and its related G protein-coupled receptors, Mrgprs.
Bader, M. and Alenina, N. and Andrade-Navarro, M.A. and Santos, R.A.
Pharmacological Reviews 66 (4): 1080-1105. October 2014

Grundlagen der molekularen Zellbiologie.
Bader, M. and Behrens, J.
In: Grundlagen der Molekularen Medizin. Molekulare Medizin . Springer, Berlin [u.a.], 3-53. ISBN 3-540-43207-8 1 January 2003

Update on tissue renin-angiotensin systems.
Bader, M. and Ganten, D.
Journal of Molecular Medicine 86 (6): 615-621. June 2008

Transgenics of the RAS.
Bader, M. and Ganten, D.
In: Angiotensin, Vol. 1. Handbook of Experimental Pharmacology ; 163, 1 . Springer, Berlin [u.a.], 229-249. ISBN 3-540-40640-9 1 January 2004

New therapeutic pathways in the RAS.
Bader, M. and Santos, R.A. and Unger, T. and Steckelings, U.M.
Journal of the Renin Angiotensin Aldosterone System 13 (4): 505-508. December 2012

Renin-angiotensin-aldosterone system.
Bader, M.
In: Encyclopedia of Molecular Pharmacology : Third Edition. Springer, Cham, 1353-1358. ISBN 978-3-030-57400-0 2021

ACE2 - das missbrauchte Multitalent [ACE2 - the hijacked all-rounder].
Bader, M.
Nephrologe 15 (6): 375-380. November 2020

Inhibition of serotonin synthesis: a novel therapeutic paradigm.
Bader, M.
Pharmacology & Therapeutics 205 : 107423. January 2020

Serotonylation: serotonin signaling and epigenetics.
Bader, M.
Frontiers in Molecular Neuroscience 12 : 288. 21 November 2019

Of mice and renin.
Bader, M.
Hypertension 70 (1): 35-37. July 2017

The Meaning of Mas.
Bader, M. and Alenina, N. and Young, D. and Santos, R.A.S. and Touyz, R.M.
Hypertension 72 (5): 1072-1075. November 2018

Alternative renin-angiotensin system.
Bader, M. and Muscha Steckelings, U. and Alenina, N. and Santos, R.A.S. and Ferrario, C.M.
Hypertension 16 February 2024 (In Press)

Xanthine derivatives, their use as a medicament, and pharmaceutical preparations comprising the same.
Max-Delbrück-Centrum für Molekulare Medizin.
WO/2016/135199. 1 September 2016

ACE2, a multifunctional protein - from cardiovascular regulation to COVID-19.
Bader, M. and Turner, A.J. and Alenina, N.
Clinical Science 134 (23): 3229-3232. 11 December 2020

Role of the local renin-angiotensin system in cardiac damage: a minireview focussing on transgenic animal models.
Bader, M.
Journal of Molecular and Cellular Cardiology 34 (11): 1455-1462. November 2002

hnRNP-K targets open chromatin in mouse embryonic stem cells in concert with multiple regulators.
Bakhmet, E.I. and Nazarov, I.B. and Gazizova, A.R. and Vorobyeva, N.E. and Kuzmin, A.A. and Gordeev, M.N. and Sinenko, S.A. and Aksenov, N. D. and Artamonova, T.O. and Khodorkovskii, M.A. and Alenina, N. and Onichtchouk, D. and Wu, G. and Schöler, H.R. and Tomilin, A.N.
Stem Cells 37 (8): 1018-1029. August 2019

Stress worsens endothelial function and ischemic stroke via glucocorticoids.
Balkaya, M. and Prinz, V. and Custodis, F. and Gertz, K. and Kronenberg, G. and Kroeber, J. and Fink, K. and Plehm, R. and Gass, P. and Laufs, U. and Endres, M.
Stroke 42 (11): 3258-3264. November 2011

Angiotensin.
Baltatu, O. and Bader, M.
In: Encyclopedia of Stress. UNSPECIFIED, 182-186. ISBN 978-0-12-373947-6 2007

Brain renin-angiotensin system - Lessons from functional genomics.
Baltatu, O. and Bader, M.
Neuroendocrinology 78 (5): 253-259. November 2003

Genetic targeting of the brain renin-angiotensin system in transgenic rats: Impact on stress-induced renin release.
Baltatu, O. and Campos, L.A. and Bader, M.
Acta Physiologica Scandinavica 181 (4): 579-584. 1 August 2004

Abolition of end-organ damage by antiandrogen treatment in female hypertensive transgenic rats.
Baltatu, O. and Cayla, C. and Iliescu, R. and Andreev, D. and Bader, M.
Hypertension 41 (3): 830-833. March 2003

Local renin angiotensin system and the brain-A continuous quest for knowledge.
Baltatu, O.C. and Campos, L.A. and Bader, M.
Peptides 32 (5): 1083-1086. May 2011

Avosentan is protective in hypertensive nephropathy at doses not causing fluid retention.
Baltatu, O.C. and Zaugg, C.E. and Schumacher, C. and Louie, P. and Campos, L.A. and Bader, M.
Pharmacological Research 80 : 9-13. February 2014

Transcriptional regulation of the rat bradykinin B2 receptor gene: Identification of a silencer element.
Baptista, H.A. and Avellar, M.C.W. and Araujo, R.C. and Pesquero, J.L. and Schanstra, J.P. and Bascands, J.L. and Esteve, J.P. and Paiva, A.C.M. and Bader, M. and Pesquero, J.B.
Molecular Pharmacology 62 (6): 1344-1355. 1 December 2002

Induction and analysis of cardiac hypertrophy in transgenic animal models.
Barbosa, M.E. and Alenina, N. and Bader, M.
In: Molecular cardiology: Methods and protocols. Methods in Molecular Medicine ; 112 . Humana Press, Totowa, NJ, 339-352. ISBN 1-58829-363-7 1 January 2005

Regulation of hippocampal synaptic plasticity thresholds and changes in exploratory and learning behavior in dominant negative NPR-B mutant rats.
Barmashenko, G. and Buttgereit, J. and Herring, N. and Bader, M. and Oezcelik, C. and Manahan-Vaughan, D. and Braunewell, K.H.
Frontiers in Molecular Neuroscience 7 : 95. 1 December 2014

Altered glucose homeostasis and hepatic function in obese mice deficient for both kinin receptor genes.
Barros, C.C. and Haro, A. and Russo, F.J.V.P. and Schadock, I. and Almeida, S.S. and Ribeiro, R.A. and Vanzela, E.C. and Lanzoni, V.P. and Barros, F.C. and Moraes, M.R. and Mori, M.A. and Bacurau, R.F.P. and Wurtele, M. and Boschero, A.C. and Carneiro, E.M. and Bader, M. and Pesquero, J.B. and Araujo, R.C.
PLoS ONE 7 (7): e40573. 19 July 2012

Chronic overexpression of bradykinin in kidney causes polyuria and cardiac hypertrophy.
Barros, C.C. and Schadock, I. and Sihn, G. and Rother, F. and Xu, P. and Popova, E. and Lapidus, I. and Plehm, R. and Heuser, A. and Todiras, M. and Bachmann, S. and Alenina, N. and Araujo, R.C. and Pesquero, J.B. and Bader, M.
Frontiers in Medicine 5 : 338. December 2018

Renoprotective effects of AVE0991, a nonpeptide Mas receptor agonist, in experimental acute renal injury.
Barroso, L.C. and Silveira, K.D. and Lima, C.X. and Borges, V. and Bader, M. and Rachid, M. and Souza Santos, R.A. and Souza, D.G. and Simoes e Silva, A.C. and Teixeira, M.M.
International Journal of Hypertension 2012 : 808726. 2012

Endothelium dependent expression and underlying mechanisms of des-Arg(9)-bradykinin-induced B(1)R-mediated vasoconstriction in rat portal vein.
Basei, F.L. and Cabrini, D.A. and Figueiredo, C.P. and Forner, S. and Hara, D.B. and Nascimento, A.F.Z. and Ceravolo, G.S. and Carvalho, M.H.C. and Bader, M. and Medeiros, R. and Calixto, J.B.
Peptides 37 (2): 216-224. October 2012

The caffeine-binding adenosine A2A receptor induces age-like HPA-axis dysfunction by targeting glucocorticoid receptor function.
Batalha, V.L. and Ferreira, D.G. and Coelho, J.E. and Valadas, J.S. and Gomes, R. and Temido-Ferreira, M. and Shmidt, T. and Baqi, Y. and Buée, L. and Müller, C.E. and Hamdane, M. and Outeiro, T.F. and Bader, M. and Meijsing, S.H. and Sadri-Vakili, G. and Blum, D. and Lopes, L.V.
Scientific Reports 6 : 31493. 11 August 2016

Prorenin is the endogenous agonist of the (pro)renin receptor. Binding kinetics of renin and prorenin in rat vascular smooth muscle cells overexpressing the human (pro)renin receptor.
Batenburg, W.W. and Krop, M. and Garrelds, I.M. and de Vries, R. and de Bruin, R.J.A. and Burckle, C.A. and Mueller, D.N. and Bader, M. and Nguyen, G. and Danser, A.H.J.
Journal of Hypertension 25 (12): 2441-2453. December 2007

Aliskiren-binding increases the half life of renin and prorenin in rat aortic vascular smooth muscle cells.
Batenburg, W.W. and de Bruin, R.J. and van Gool, J.M. and Mueller, D.N. and Bader, M. and Nguyen, G. and Danser, A.H.
Arteriosclerosis Thrombosis and Vascular Biology 28 (6): 1151-1157. June 2008

ACE activity is modulated by the enzyme alpha-galactosidase A.
Batista, E.C. and Carvalho, L.R. and Casarini, D.E. and Carmona, A.K. and Dos Santos, E.L. and da Silva, E.D. and Dos Santos, R.A. and Nakaie, C.R. and Rojas, M.V. and de Oliveira, S.M. and Bader, M. and D'Almeida, V. and Martins, A.M. and de Picoly Souza, K. and Pesquero, J.B.
Journal of Molecular Medicine 89 (1): 65-74. January 2011

Role of endothelial kinin B(1) receptor on the membrane potential of transgenic rat aorta.
Batista, C. and Sales, V.M. and Merino, V.F. and Bader, M. and Feres, T. and Pesquero, J.B.
Physiological Research 71 (4): 477-487. August 2022

Paternal exercise protects against liver steatosis in the male offspring of mice submitted to high fat diet.
Batista, R.O. and Budu, A. and Alves-Silva, T. and Arakaki, A.M. and Gregnani, M.F.S. and Rodrigues Húngaro, T.G. and Burgos-Silva, M. and Wasinski, F. and Lanzoni, V.P. and Camara, N.O.S. and Oyama, L.M. and Bader, M. and Araújo, R.C.
Life Sciences 263 : 118583. 15 December 2020

Evidence in favor of the essentiality of human cell membrane-bound ACE2 and against soluble ACE2 for SARS-CoV-2 infectivity.
Batlle, D. and Monteil, V. and Garreta, E. and Hassler, L. and Wysocki, J. and Chandar, V. and Schwartz, R.E. and Mirazimi, A. and Montserrat, N. and Bader, M. and Penninger, J.M.
Cell 185 (11): 1837-1839. 26 May 2022

Elastase-2, a tissue alternative pathway for angiotensin II generation, plays a role in circulatory sympathovagal balance in mice.
Becari, C. and Durand, M.T. and Guimaraes, A.O. and Lataro, R.M. and Prado, C.M. and de Oliveira, M. and Candido, S.C.O. and Pais, P. and Ribeiro, M.S. and Bader, M. and Pesquero, J.B. and Salgado, M.C.O. and Salgado, H.C.
Frontiers in Physiology 8 : 170. 23 March 2017

Impact of genetic deletion of MrgD or Mas receptors in depressive-like behaviour in mice.
Becari, L. and Fonseca, M.L.A. and Gonçalves, S.C.A and Bader, M. and Santos, R.A.S. and Campagnole-Santos, M.J. and Kangussu, L.M.
Acta Neuropsychiatrica 35 (1): 27-34. February 2023

Brain serotonin deficiency leads to social communication deficits in mice.
Beis, D. and Holzwarth, K. and Flinders, M. and Mosienko, V. and Bader, M. and Wöhr, M. and Alenina, N.
Biology Letters 11 (3): 20150057. March 2015

Crosstalk between the renin-angiotensin, complement and kallikrein-kinin systems in inflammation.
Bekassy, Z. and Lopatko Fagerström, I. and Bader, M. and Karpman, D.
Nature Reviews Immunology 22 (7): 411-428. July 2022

Axonal transcription factors signal retrogradely in lesioned peripheral nerve.
Ben-Yaakov, K. and Dagan, S.Y. and Segal-Ruder, Y. and Shalem, O. and Vuppalanchi, D. and Willis, D.E. and Yudin, D. and Rishal, I. and Rother, F. and Bader, M. and Blesch, A. and Pilpel, Y. and Twiss, J.L. and Fainzilber, M.
EMBO Journal 31 (6): 1350-1363. 13 January 2012

Decreased hepatic gluconeogenesis in transgenic rats with increased circulating angiotensin-(1-7).
Bilman, V. and Mares-Guia, L. and Nadu, A.P. and Bader, M. and Campagnole-Santos, M.J. and Santos, R.A.S. and Santos, S.H.S.
Peptides 37 (2): 247-251. October 2012

Requirement for the heart-type fatty acid binding protein in cardiac fatty acid utilization.
Binas, B. and Danneberg, H. and McWhir, J. and Mullins, L. and Clark, A.J.
FASEB Journal 13 (8): 805-812. May 1999

Atp6ap2 deletion causes extensive vacuolation that consumes the insulin content of pancreatic β cells.
Binger, K.J. and Neukam, M. and Tattikota, S.G. and Qadri, F. and Puchkov, D. and Willmes, D.M. and Wurmsee, S. and Geisberger, S. and Dechend, R. and Raile, K. and Kurth, T. and Nguyen, G. and Poy, M.N. and Solimena, M. and Muller, D.N. and Birkenfeld, A.L.
Proceedings of the National Academy of Sciences of the United States of America 116 (40): 19983-19988. 1 October 2019

Effect of angiotensin(1-7) on heart function in an experimental rat model of obesity.
Blanke, K. and Schlegel, F. and Raasch, W. and Bader, M. and Dähnert, I. and Dhein, S. and Salameh, A.
Frontiers in Physiology 6 : 392. 21 December 2015

Calcineurin inhibitor cyclosporine a activates renal Na-K-Cl cotransporters via local and systemic mechanisms.
Blankenstein, K.I. and Borschewski, A. and Labes, R. and Paliege, A. and Boldt, C. and McCormick, J.A. and Ellison, D.H. and Bader, M. and Bachmann, S. and Mutig, K.
American Journal of Physiology Renal Physiology 312 (3): F489-F501. 2 March 2017

Overexpression of the C-type natriuretic peptide (CNP) is associated with overgrowth and bone anomalies in an individual with balanced t(2;7) translocation.
Bocciardi, R. and Giorda, R. and Buttgereit, J. and Gimelli, S. and Divizia, M.T. and Beri, S. and Garofalo, S. and Tavella, S. and Lerone, M. and Zuffardi, O. and Bader, M. and Ravazzolo, R. and Gimelli, G.
Human Mutation 28 (7): 724-731. July 2007

Blood pressure and renin-angiotensin system resetting in transgenic rats with elevated plasma Val5-angiotensinogen.
Bohlender, J. and Bader, M. and Menard, J. and Nussberger, J.
Journal of Hypertension 30 (8): 1597-1605. August 2012

Tonin in rat heart with experimental hypertrophy.
Borges, J.C. and Silva, J.A. and Gomes, M.A. and Lomez, E.S.L. and Leite, K.M. and Araujo, R.C. and Bader, M. and Pesquero, J.B. and Pesquero, J.L.
American Journal of Physiology Heart and Circulatory Physiology 284 (6): H2263-H2268. 1 June 2003

The coming together of allosteric and phosphorylation mechanisms in the molecular integration of A2A heteroreceptor complexes in the dorsal and ventral striatal-pallidal GABA neurons.
Borroto-Escuela, D.O. and Ferraro, L. and Beggiato, S. and Narváez, M. and Fores-Pons, R. and Alvarez-Contino, J.E. and Wydra, K. and Frankowska, M. and Bader, M. and Filip, M. and Fuxe, K.
Pharmacological Reports 73 (4): 1096-1108. August 2021

Altered regional blood flow distribution in Mas-deficient mice.
Botelho-Santos, G.A. and Bader, M. and Alenina, N. and Santos, R.A.
Therapeutic Advances in Cardiovascular Disease 6 (5): 201-211. October 2012

Expression of an angiotensin-(1-7)-producing fusion protein in rats induced marked changes in regional vascular resistance.
Botelho-Santos, G.A. and Sampaio, W.O. and Reudelhuber, T.L. and Bader, M. and Campagnole-Santos, M.J. and Santos, R.A.
American Journal of Physiology Heart and Circulatory Physiology 292 (5): H2485-H2490. 1 May 2007

ATP6AP2 over-expression causes morphological alterations in the hippocampus and in hippocampus-related behaviour.
Bracke, A. and Schäfer, S. and von Bohlen und Halbach, V. and Klempin, F. and Bente, K. and Bracke, K. and Staar, D. and van den Brandt, J. and Harzsch, S. and Bader, M. and Wenzel, U.O. and Peters, J. and von Bohlen und Halbach, O.
Brain Structure & Function 223 (5): 2287-2302. June 2018

Cardiovascular peptide hormones - special edition.
Braga, T.V. and Mervaala, E. and Santos, R. and Bader, M.
Peptides 167 : 171062. September 2023

Rat embryonic stem cells: a progress report.
Brenin, D.R. and Look, J. and Bader, M. and Hübner, N. and Levan, G. and Iannaccone, P.
Transplantation Proceedings 29 : 1761-1765. 1 January 1997

TPH2 deficiency influences neuroplastic mechanisms and alters the response to an acute stress in a sex specific manner.
Brivio, P. and Sbrini, G. and Peeva, P. and Todiras, M. and Bader, M. and Alenina, N. and Calabrese, F.
Frontiers in Molecular Neuroscience 11 : 389. 30 October 2018

Impairment of the angiotensin-converting enzyme 2-angiotensin-(1-7)-Mas axis contributes to the acceleration of two-kidney, one-clip Goldblatt hypertension.
Buergelova, M. and Vanourkova, Z. and Thumova, M. and Dvorak, P. and Opocensky, M. and Kramer, H.J. and Zelizko, M. and Maly, J. and Bader, M. and Cervenka, L.
Journal of Hypertension 27 (10): 1988-2000. October 2009

Prorenin and its ancient receptor.
Burckle, C. and Bader, M.
Hypertension 48 (4): 549-551. October 2006

Elevated blood pressure and heart rate in human renin receptor transgenic rats.
Burckle, C.A. and Danser, A.H.J. and Mueller, D.N. and Garrelds, I.M. and Gasc, J.M. and Popova, E. and Plehm, R. and Peters, J. and Bader, M. and Nguyen, G.
Hypertension 47 (3): 552-556. March 2006

Validation of commercial Mas receptor antibodies for utilization in Western Blotting, immunofluorescence and immunohistochemistry studies.
Burghi, V. and Fernández, N.C. and Gándola, Y.B. and Piazza, V.G. and Quiroga, D.T. and Guilhen Mario, E. and Felix Braga, J. and Bader, M. and Santos, R.A.S. and Dominici, F.P. and Munoz, M.C.
PLoS ONE 12 (8): e0183278. 16 August 2017

Inhibition of the NLRP3/IL-1β axis protects against sepsis-induced cardiomyopathy.
Busch, K. and Kny, M. and Huang, N. and Klassert, T.E. and Stock, M. and Hahn, A. and Graeger, S. and Todiras, M. and Schmidt, S. and Chamling, B. and Willenbrock, M. and Groß, S. and Biedenweg, D. and Heuser, A. and Scheidereit, C. and Butter, C. and Felix, S.B. and Otto, O. and Luft, F.C. and Slevogt, H. and Fielitz, J.
Journal of Cachexia Sarcopenia and Muscle 12 (6): 1653-1668. December 2021

Visinin-like protein 1 regulates natriuretic peptide receptor B in the heart.
Buttgereit, J. and Qadri, F. and Monti, J. and Langenickel, T.H. and Dietz, R. and Braunewell, K.H. and Bader, M.
Regulatory Peptides 161 (1-3): 51-57. 9 April 2010

C-type natriuretic peptide and NPR-B signalling inhibits cardiac sympathetic neurotransmission and autonomic function.
Buttgereit, J. and Shanks, J. and Li, D. and Hao, G. and Athwal, A. and Langenickel, T.H. and Wright, H. and da Costa Goncalves, A.C. and Monti, J. and Plehm, R. and Popova, E. and Qadri, F. and Lapidus, I. and Ryan, B. and Özcelik, C. and Paterson, D.J. and Bader, M. and Herring, N.
Cardiovascular Research 112 (3): 637-644. December 2016

Baroreflex control of heart rate and renal sympathetic nerve activity in rats with low brain angiotensinogen.
Caligiorne, S.M. and Silva, A.Q. and Fontes, M.A. and Silva, J.R. and Baltatu, O.C. and Bader, M. and Santos, R.A. and Campagnole-Santos, M.J.
Neuropeptides 42 (2): 159-168. April 2008

Brain renin-angiotensin system in hypertension, cardiac hypertrophy, and heart failure.
Campos, L.A. and Bader, M. and Baltatu, O.C.
Frontiers in Physiology 2 : 115. 3 January 2012

The Angiotensin-melatonin axis.
Campos, L.A. and Cipolla-Neto, J. and Amaral, F.G. and Michelini, L.C. and Bader, M. and Baltatu, O.C.
International Journal of Hypertension 2013 : 521783. 2013

Differential regulation of central vasopressin receptors in transgenic rats with low brain angiotensinogen.
Campos, L.A. and Couto, A.S. and Iliescu, R. and Santos, J.A. and Santos, R.A.S. and Ganten, D. and Campagnole-Santos, M.J. and Bader, M. and Baltatu, O.
Regulatory Peptides 119 (3): 177-182. 15 July 2004

Enhanced isoproterenol-induced cardiac hypertrophy in transgenic rats with low brain angiotensinogen.
Campos, L.A. and Iliescu, R. and Fontes, M.A.P. and Schlegel, W.P. and Bader, M. and Baltatu, O.C.
American Journal of Physiology Heart and Circulatory Physiology 291 (5): H2371-H2376. 1 November 2006

Altered circadian rhythm reentrainment to light phase shifts in rats with low brain angiotensinogen.
Campos, L.A. and Plehm, R. and Cipolla-Neto, J. and Bader, M. and Baltatu, O.C.
American Journal of Physiology Regulatory Integrative and Comparative Physiology 290 (4): R1122-R1127. 1 April 2006

Increased blood pressure and water intake in transgenic mice expressing rat tonin in the brain.
Cardoso, C.C. and Alenina, N. and Ferreira, A.J. and Qadri, F. and Lima, M.P. and Gross, V. and Todiras, M. and Pesquero, J.B. and Pesquero, J.L. and Bader, M.
Biological Chemistry 391 (4): 435-441. April 2010

Functional expression of angiotensinogen depends on splicing enhancers in exon 2.
Cardoso, C.C. and Cabrini, D.A. and May, M. and Bhagat, C.S. and Eleno, N. and Cayla, C. and Walther, T. and Bader, M.
Molecular and Cellular Endocrinology 332 (1-2): 228-233. 30 January 2011

Structure and expression of two kininogen genes in mice.
Cardoso, C.C. and Garrett, T. and Cayla, C. and Meneton, P. and Pesquero, J.B. and Bader, M.
Biological Chemistry 385 (3-4): 295-301. 1 January 2004

Functional domains of human tryptophan hydroxylase 2 (hTPH2).
Carkaci-Salli, N. and Flanagan, J.M. and Martz, M.K. and Salli, U. and Walther, D.J. and Bader, M. and Vrana, K.E.
Journal of Biological Chemistry 281 (38): 28105-28112. 22 September 2006

Serotonin regulates prostate growth through androgen receptor modulation.
Carvalho-Dias, E. and Miranda, A. and Martinho, O. and Mota, P. and Costa, A. and Nogueira-Silva, C. and Moura, R.S. and Alenina, N. and Bader, M. and Autorino, R. and Lima, E. and Correia-Pinto, J.
Scientific Reports 7 (1): 15428. 13 November 2017

Bradykinin inhibits hepatic gluconeogenesis in obese mice.
Castilho Barros, C. and Haro, A. and Russo, F.J. and Schadock, I. and Soares Almeida, S. and Castellani Reis, F. and Rocha Moraes, M. and Haidar, A. and Hirata, A.E. and Mori, M.A. and Pereira Bacurau, R.F. and Wuertele, M. and Bader, M. and Bosco Pesquero, J. and Araujo, R.C.
Laboratory Investigation 92 (10): 1419-1427. October 2012

Effects of genetic deletion of angiotensin-(1-7) receptor Mas on cardiac function during ischemia/reperfusion in the isolated perfused mouse heart.
Castro, C.H. and Santos, R.A. and Ferreira, A.J. and Bader, M. and Alenina, N. and Almeida, A.P.
Life Sciences 80 (3): 264-268. 23 December 2006

Nephropathy in hypertensive animals is linked to M2 macrophages and increased expression of the YM1/Chi3l3 protein.
Cavalcante, P.A.M. and Alenina, N. and Budu, A. and Freitas-Lima, L.C. and Alves-Silva, T. and Agudelo, J.S.H. and Qadri, F. and Camara, N.O.S. and Bader, M. and Araújo, R.C.
Mediators of Inflammation 2019 : 9086758. 10 July 2019

Neurolysin knockout mice generation and initial phenotype characterization.
Cavalcanti, D.M.L.P. and Castro, L.M. and Rosa Neto, J.C. and Seelaender, M. and Neves, R.X. and Oliveira, V. and Forti, F.L. and Iwai, L.K. and Gozzo, F.C. and Todiras, M. and Schadock, I. and Barros, C.C. and Bader, M. and Ferro, E.S.
Journal of Biological Chemistry 289 (22): 15426-15440. 30 May 2014

Impaired nociception and peripheral opioid antinociception in mice lacking both kinin b1 and b2 receptors.
Cayla, C. and Labuz, D. and Machelska, H. and Bader, M. and Schaefer, M. and Stein, C.
Anesthesiology 116 (2): 448-457. February 2012

Structure of the mammalian kinin receptor gene locus.
Cayla, C. and Merino, V.F. and Cabrini, D.A. and Silva, J.A. and Pesquero, J.B. and Bader, M.
International Immunopharmacology 2 (13-14): 1721-1727. December 2002

Mice deficient for both kinin receptors are normotensive and protected from endotoxin- induced hypotension.
Cayla, C. and Todiras, M. and Iliescu, R. and Saul, V.V. and Gross, V. and Pilz, B. and Chai, G. and Merino, V.F. and Pesquero, J.B. and Baltatu, O.C. and Bader, M.
FASEB Journal 21 (8): 1689-1698. June 2007

Brown adipose tissue transcriptome unveils an important role of the Beta-alanine/alamandine receptor, MrgD, in metabolism.
Cerri, G.C. and Santos, S.H.S. and Bader, M. and Dos Santos, R.A.S.
Journal of nutritional biochemistry 114 : 109268. April 2023

Distinct endothelial pathways underlie sexual dimorphism in vascular auto-regulation.
Chan, M.V. and Bubb, K.J. and Noyce, A. and Villar, I.C. and Duchene, J. and Hobbs, A.J. and Scotland, R.S. and Ahluwalia, A.
British Journal of Pharmacology 167 (4): 805-817. October 2012

Serotonin transporter-dependent histone serotonylation in placenta contributes to the neurodevelopmental transcriptome.
Chan, J.C. and Alenina, N. and Cunningham, A.M. and Ramakrishnan, A. and Shen, Li and Bader, M. and Maze, I.
Journal of Molecular Biology 436 (7): 168454. 1 April 2024

Oxidative RNA damage in the pathogenesis and treatment of type 2 diabetes.
Chen, X. and Yu, H. and Li, Z. and Ye, W. and Liu, Z. and Gao, J. and Wang, Y. and Li, X. and Zhang, L. and Alenina, N. and Bader, M. and Ding, H. and Li, P. and Aung, L.H.H.
Frontiers in Physiology 13 : 725919. 28 March 2022

Striatal adenosine-cannabinoid receptor interactions in rats overexpressing adenosine A2A receptors.
Chiodi, V. and Ferrante, A. and Ferraro, L. and Potenza, R.L. and Armida, M. and Beggiato, S. and Pezzola, A. and Bader, M. and Fuxe, K. and Popoli, P. and Domenici, M.R.
Journal of Neurochemistry 136 (5): 907-917. March 2016

Karyopherin alpha 1 regulates satellite cell proliferation and survival by modulating nuclear import.
Choo, H.J. and Cutler, A. and Rother, F. and Bader, M. and Pavlath, G.K.
Stem Cells 34 (11): 2784-2797. November 2016

Characterization of trophoblast and extraembryonic endoderm cell lineages derived from rat preimplantation embryos.
Chuykin, I. and Lapidus, I. and Popova, E. and Vilianovich, L. and Mosienko, V. and Alenina, N. and Binas, B. and Chai, G. and Bader, M. and Krivokharchenko, A.
PLoS ONE 5 (3): e9794. 29 March 2010

Activation of the PTHRP/adenylate cyclase pathway promotes differentiation of rat XEN cells into parietal endoderm, whereas Wnt/β-catenin signaling promotes differentiation into visceral endoderm.
Chuykin, I. and Schulz, H. and Guan, K. and Bader, M.
Journal of Cell Science 126 (Pt 1): 128-138. 1 January 2013

Combining mass spectrometry and pull-down techniques for the study of receptor heteromerization. Direct epitope-epitope electrostatic interactions between adenosine A2A and dopamine D2 receptors.
Ciruela, F. and Burgueno, J. and Casado, V.V. and Canals, M. and Marcellino, D. and Goldberg, S.R. and Bader, M. and Fuxe, K. and Agnati, L.F. and Lluis, C. and Franco, R. and Ferre, S. and Woods, A.S.
Analytical Chemistry 76 (18): 5354-5363. 1 January 2004

Overexpression of adenosine A2A receptors in rats: effects on depression, locomotion, and anxiety.
Coelho, J.E. and Alves, P. and Canas, P.M. and Valadas, J.S. and Shmidt, T. and Batalha, V.L. and Ferreira, D.G. and Ribeiro, J.A. and Bader, M. and Cunha, R.A. and do Couto, F.S. and Lopes, L.V.
Frontiers in Psychiatry 5 : 67. 13 June 2014

Transforming growth factor type-β inhibits Mas receptor expression in fibroblasts but not in myoblasts or differentiated myotubes; Relevance to fibrosis associated to muscular dystrophies.
Cofre, C. and Acuna, M.J. and Contreras, O. and Morales, M.G. and Riquelme, C. and Bader, M. and Santos, R. and Cabello-Verrugio, C. and Brandan, E.
BioFactors 41 (2): 111-120. March 2015

A role of the (pro)renin receptor in neuronal cell differentiation.
Contrepas, A. and Walker, J. and Koulakoff, A. and Franek, K.J. and Qadri, F. and Giaume, C. and Corvol, P. and Schwartz, C.E. and Nguyen, G.
American Journal of Physiology Regulatory Integrative and Comparative Physiology 297 (2): R250-R257. August 2009

Transient inflammatory response induced by apoptotic cells is an important mediator of melanoma cell engraftment and growth.
Correa, M. and Machado, J. and Carneiro, C.R.W. and Pesquero, J.B. and Bader, M. and Travassos, L.R. and Chammas, R. and Jasiulionis, M.G.
International Journal of Cancer 114 (3): 356-363. 1 January 2005

Evidence that the vasodilator angiotensin-(1-7)-Mas axis plays an important role in erectile function.
Costa-Goncalves, A.C. and Leite, R. and Fraga-Silva, R.A. and Pinheiro, S.V. and Reis, A.B. and Reis, F.M. and Touyz, R.M. and Webb, R.C. and Alenina, N. and Bader, M. and Santos, R.A.S.
American Journal of Physiology: Heart and Circulatory Physiology 293 (4): H2588-H2596. 1 October 2007

Short-term western diet aggravates non-alcoholic fatty liver disease (NAFLD) with portal hypertension in TGR(mREN2)27 rats.
Cremonese, C. and Schierwagen, R. and Uschner, F.E. and Torres, S. and Tyc, O. and Ortiz, C. and Schulz, M. and Queck, A. and Kristiansen, G. and Bader, M. and Sauerbruch, T. and Weiskirchen, R. and Walther, T. and Trebicka, J. and Klein, S.
International Journal of Molecular Sciences 21 (9): 3308. 1 May 2020

Dll4-Notch signaling determines the formation of native arterial collateral networks and arterial function in mouse ischemia models.
Cristofaro, B. and Shi, Y. and Faria, M. and Suchting, S. and Leroyer, A.S. and Trindade, A. and Duarte, A. and Zovein, A.C. and Iruela-Arispe, M.L. and Nih, L.R. and Kubis, N. and Henrion, D. and Loufrani, L. and Todiras, M. and Schleifenbaum, J. and Gollasch, M. and Zhuang, Z.W. and Simons, M. and Eichmann, A. and le Noble, F.
Development 140 (8): 1720-1729. April 2013

Is the kidney always the cause of hypertension? Distinct roles for the kidney and systemic tissues in blood pressure regulation by the Renin-Angiotensin system. J Clin Invest 115: 1092-1099, 2005.
Crowley, S. and Gurley, S. and Oliverio, M. and Pazmino, A. and Griffiths, R. and Flannery, P. and Spurney, R. and Kim, H.S. and Smithies, O. and Le, T. and Coffman, T. and Boucher, J. and Masri, B. and Daviaud, D. and Gesta, S. and Guigne, C. and Mazzucotelli, A. and Castan-Laurell, I. and Tack, I. and Knibiehler, B. and Carpene, C. and Audigier, Y. and Saulnier-Blache, J. and Valet, P. and Engeli, S. and Boehnke, J. and Gorzelniak, K. and Janke, J. and Schling, P. and Bader, M. and Luft, F.C. and Sharma, A.
Journal of the American Society of Nephrology 16 : 1525-1532. 1 January 2005

Reply to Lrp5 regulation of bone mass and gut serotonin synthesis.
Cui, Y. and Niziolek, P.J. and MacDonald, B.T. and Alenina, N. and Matthes, S. and Jacobsen, C.M. and Conlon, R.A. and Brommage, R. and Powell, D.R. and He, X. and Bader, M. and Williams, B.O. and Warman, M.L. and Robling, A.G.
Nature Medicine 20 (11): 1229-1230. 6 November 2014

Lrp5 functions in bone to regulate bone mass.
Cui, Y. and Niziolek, P.J. and Macdonald, B.T. and Zylstra, C.R. and Alenina, N. and Robinson, D.R. and Zhong, Z. and Matthes, S. and Jacobsen, C.M. and Conlon, R.A. and Brommage, R. and Liu, Q. and Mseeh, F. and Powell, D.R. and Yang, Q.M. and Zambrowicz, B. and Gerrits, H. and Gossen, J.A. and He, X. and Bader, M. and Williams, B.O. and Warman, M.L. and Robling, A.G.
Nature Medicine 17 (6): 684-691. June 2011

Myogenic vasoconstriction requires canonical G(q/11) signaling of the angiotensin II type 1 receptor.
Cui, Y. and Kassmann, M. and Nickel, S. and Zhang, C. and Alenina, N. and Anistan, Y.M. and Schleifenbaum, J. and Bader, M. and Welsh, D.G. and Huang, Y. and Gollasch, M.
Journal of the American Heart Association 11 (4): e022070. 15 February 2022

Myogenic vasoconstriction requires canonical Gq/11 signaling of the angiotensin II type 1a receptor in the murine vasculature.
Cui, Y. and Kassmann, M. and Nickel, S. and Zhang, C. and Alenina, N. and Anistan, Y.M. and Schleifenbaum, J. and Bader, M. and Welsh, D.G. and Huang, Y. and Gollasch, M.
bioRxiv : 2020.09.09.289280. 11 September 2020

Oxidative status imbalance in patients with metabolic syndrome: Role of the myeloperoxidase/hydrogen peroxide axis.
Da Fonseca, L.J.S. and Nunes-Souza, V. and Guedes, G.D.S. and Schettino-Silva, G. and Mota-Gomes, M.A. and Rabelo, L.A.
Oxidative Medicine and Cellular Longevity 2014 : 898501. 2014

Maintenance and neuronal differentiation of chicken induced pluripotent stem-like cells.
Dai, R. and Rossello, R. and Chen, C.C. and Kessler, J. and Davison, I. and Hochgeschwender, U. and Jarvis, E.D.
Stem Cells International 2014 : 182737. 9 December 2014

The antiobese effect of AT1 receptor blockade is augmented in mice lacking Mas.
Dapper, C. and Schuster, F. and Stölting, I. and Vogt, F. and Castro e Souza, L.A. and Alenina, N. and Bader, M. and Raasch, W.
Naunyn-Schmiedeberg's Archives of Pharmacology 392 (7): 865-877. July 2019

Improved cardiovascular autonomic modulation in transgenic rats expressing an Ang-(1-7)-producing fusion protein.
Dartora, D.R. and Irigoyen, M.C. and Casali, K.R. and Moraes-Silva, I.C. and Bertagnolli, M. and Bader, M. and Santos, R.
Canadian Journal of Physiology and Pharmacology 95 (9): 993-998. September 2017

Isolation of Oct4-expressing extraembryonic endoderm precursor cell lines.
Debeb, B.G. and Galat, V. and Epple-Farmer, J. and Iannaccone, S. and Woodward, W.A. and Bader, M. and Iannaccone, P. and Binas, B.
PLoS ONE 4 (9): e7216. 28 September 2009

Platelet-derived serotonin links vascular disease and tissue fibrosis.
Dees, C. and Akhmetshina, A. and Zerr, P. and Reich, N. and Palumbo, K. and Horn, A. and Juengel, A. and Beyer, C. and Kroenke, G. and Zwerina, J. and Reiter, R. and Alenina, N. and Maroteaux, L. and Gay, S. and Schett, G. and Distler, O. and Distler, J.H.
Journal of Experimental Medicine 208 (5): 961-972. 9 May 2011

Antioxidant/oxidant status and cardiac function in bradykinin B(1)- and B(2)-receptor null mice.
Delemasure, S. and Blaes, N. and Richard, C. and Couture, R. and Bader, M. and Dutartre, P. and Girolami, J.P. and Connat, J.L. and Rochette, L.
Physiological Research 62 (5): 511-517. 2013

In vitro galactose impairs energy metabolism in the brain of young rats: protective role of antioxidants.
Delwing-de Lima, D. and Sasso, S. and Delwing-Dal Magro, D. and Pereira, N.R. and Rodrigues, A.F. and Schmitz, F. and Manoel Pereira, E. and Schramm do Nascimento, M.A. and Wyse, A.T.S.
Nucleosides Nucleotides & Nucleic Acids 42 (12): 967-985. 2023

Converging evidence in support of the serotonin hypothesis of dexfenfluramine-induced pulmonary hypertension with novel transgenic mice.
Dempsie, Y. and Morecroft, I. and Welsh, D.J. and Macritchie, N.A. and Herold, N. and Loughlin, L. and Nilsen, M. and Peacock, A.J. and Harmar, A. and Bader, M. and Maclean, M.R.
Circulation 2008 (117): 2928-2937. 3 June 2008

Nuclear translocation of hypoxia-inducible factors (HIFs): involvement of the classical importin alpha/beta pathway.
Depping, R. and Steinhoff, A. and Schindler, S.G. and Friedrich, B. and Fagerlund, R. and Metzen, E. and Hartmann, E. and Koehler, M.
Biochimica et Biophysica Acta - Molecular Cell Research 1783 (3): 394-404. March 2008

Molecular mechanisms involved in the angiotensin-(1-7)/Mas signaling pathway in cardiomyocytes.
Dias-Peixoto, M.F. and Santos, R.A. and Gomes, E.R. and Alves, M.N. and Almeida, P.W. and Greco, L. and Rosa, M. and Fauler, B. and Bader, M. and Alenina, N. and Guatimosim, S.
Hypertension 52 (3): 542-548. September 2008

Chronic dexamethasone treatment suppresses hypertension development in the transgenic rat TGR(mREN2)27.
Djavidani, B. and Sander, M. and Kreutz, R. and Zeh, K. and Bader, M. and Mellon, S.H. and Vecsei, P. and Peters, J. and Ganten, D.
Journal of Hypertension 13 (6): 637-645. 1 January 1995

Forced expression of Lmx1b enhances differentiation of mouse ES cells into serotonergic neurons.
Dolmazon, V. and Alenina, N. and Markossian, S. and Mancip, J. and Van de Vrede, Y. and Fontaine, E. and Dehay, C. and Kennedy, H. and Bader, M. and Savatier, P. and Bernat, A.
Stem Cells and Development 20 (2): 301-311. February 2011

Neuronal adenosine A(2A) receptor overexpression is neuroprotective towards 3-nitropropionic acid-induced striatal toxicity: a rat model of Huntington's disease.
Domenici, M.R. and Chiodi, V. and Averna, M. and Armida, M. and Pèzzola, A. and Pepponi, R. and Ferrante, A. and Bader, M. and Fuxe, K. and Popoli, P.
Purinergic Signalling 14 (3): 235-243. September 2018

Neprilysin is a mediator of alternative renin-angiotensin-system activation in the murine and human kidney.
Domenig, O. and Manzel, A. and Grobe, N. and Königshausen, E. and Kaltenecker, C.C. and Kovarik, J.J. and Stegbauer, J. and Gurley, S.B. and van Oyen, D. and Antlanger, M. and Bader, M. and Motta-Santos, D. and Santos, R.A. and Elased, K.M. and Säemann, M.D. and Linker, R.A. and Poglitsch, M.
Scientific Reports 6 : 33678. 21 September 2016

Apoptosis repressor with caspase recruitment domain is required for cardioprotection in response to biomechanical and ischemic stress.
Donath, S. and Li, P. and Willenbockel, C. and Al-Saadi, N. and Gross, V. and Willnow, T.E. and Bader, M. and Martin, U. and Bauersachs, J. and Wollert, K.C. and Dietz, R. and von Harsdorf, R.
Circulation 113 (9): 1203-1212. 7 March 2006

Kinin B2 receptor regulates chemokines CCL2 and CCL5 expression and modulates leukocyte recruitment and pathology in experimental autoimmune encephalomyelitis (EAE) in mice.
Dos Santos, A.C. and Roffe, E. and Arantes, R.M. and Juliano, L. and Pesquero, J.L. and Pesquero, J.B. and Bader, M. and Teixeira, M.M. and Carvalho-Tavares, J.
Journal of Neuroinflammation 5 (1): 49. 5 November 2008

Kallikrein-kinin system in inflammation.
Duchene, J. and Ahluwalia, A.
In: Kinins. de Gruyter, 261-272. ISBN 978-3-11-025234-7 November 2011

Bradykinin B2 receptor agonism: a novel therapeutic strategy for myocardial infarction?
Duchene, J. and Bader, M.
American Journal of Hypertension 23 (5): 459. May 2010

A novel inflammatory pathway involved in leukocyte recruitment: role for the kinin B1 receptor and the chemokine CXCL5.
Duchene, J. and Lecomte, F. and Ahmed, S. and Cayla, C. and Pesquero, J. and Bader, M. and Perretti, M. and Ahluwalia, A.
Journal of Immunology 179 (7): 4849-4856. 1 October 2007

Atypical chemokine receptor 1 on nucleated erythroid cells regulates hematopoiesis.
Duchene, J. and Novitzky-Basso, I. and Thiriot, A. and Casanova-Acebes, M. and Bianchini, M. and Etheridge, S.L. and Hub, E. and Nitz, K. and Artinger, K. and Eller, K. and Caamano, J. and Ruelicke, T. and Moss, P. and Megens, R.T.A. and von Andrian, U.H. and Hidalgo, A. and Weber, C. and Rot, A.
Nature Immunology 18 (7): 753-761. July 2017

The lncRNA landscape of cardiac resident macrophages and identification of Schlafenlnc as a regulator of macrophage migratory function.
Dueck, A. and Althaus, L. and Heise, K. and Esfandyari, D. and Bayguen, S. and Brandes, R.P. and Gagneur, J. and Jae, N. and Knolle, P. and Leisegang, M.S. and Maegdefessel, L. and Meitinger, T. and Petzold, N. and Ramanujam, D. and Sager, H. and Schulz, C. and Theodorakis, E. and Uzonyi, A. and Weinberger, T. and Bader, M. and Schmidt-Supprian, M. and Engelhardt, S.
bioRxiv : 2022.11.30.518576. 22 December 2022

Serotonin stimulates platelet receptor shedding by tumor necrosis factor-alpha-converting enzyme (ADAM17).
Duerschmied, D. and Canault, M. and Lievens, D. and Brill, A. and Cifuni, S.M. and Bader, M. and Wagner, D.D.
Journal of Thrombosis and Haemostasis 7 (7): 1163-1171. July 2009

Platelet serotonin promotes the recruitment of neutrophils to sites of acute inflammation in mice.
Duerschmied, D. and Suidan, G.L. and Demers, M. and Herr, N. and Carbo, C. and Brill, A. and Cifuni, S.M. and Mauler, M. and Cicko, S. and Bader, M. and Idzko, M. and Bode, C. and Wagner, D.D.
Blood 121 (6): 1008-1015. 7 February 2013

Angiotensin-converting enzyme inhibition after experimental myocardial infarct: Role of the kinin B1 and B2 receptors.
Duka, A. and Kintsurashvili, E. and Duka, I. and Ona, D. and Hopkins, T.A. and Bader, M. and Gavras, I. and Gavras, H.
Hypertension 51 (5): 1352-1357. May 2008

Blockade of endothelin receptors attenuates end-organ damage in homozygous hypertensive Ren-2 transgenic rats.
Dvorak, P. and Kramer, H.J. and Baecker, A. and Maly, J. and Kopkan, L. and Vaneckova, I. and Vernerova, Z. and Opocensky, M. and Tesar, V. and Bader, M. and Ganten, D. and Janda, J. and Cervenka, L.
Kidney and Blood Pressure Research 27 (4): 248-258. 1 January 2004

Importin α1 is required for nuclear import of herpes simplex virus proteins and capsid assembly in fibroblasts and neurons.
Döhner, K. and Ramos-Nascimento, A. and Bialy, D. and Anderson, F. and Hickford-Martinez, A. and Rother, F. and Koithan, T. and Rudolph, K. and Buch, A. and Prank, U. and Binz, A. and Hügel, S. and Lebbink, R.J. and Hoeben, R.C. and Hartmann, E. and Bader, M. and Bauerfeind, R. and Sodeik, B.
PLoS Pathogens 14 (1): e1006823. 5 January 2018

Short-term cardiovascular physical programme ameliorates arterial stiffness and decreases oxidative stress in women with metabolic syndrome.
Eleuterio-Silva, M.A. and Sa da Fonseca, L.J. and Velloso, E.P.P. and da Silva Guedes, G. and Sampaio, W.O. and da Silva, W.F. and Mota-Gomes, M.A. and da Silva Lima, L.V. and Santos, R.A.S. and Rabelo, L.A.
Journal of Rehabilitation Medicine 45 (6): 572-579. June 2013

Weight loss and the renin-angiotensin-aldosterone system.
Engeli, S. and Boehnke, J. and Gorzelniak, K. and Janke, J. and Schling, P. and Bader, M. and Luft, F.C. and Sharma, A.M.
Hypertension 45 : 356-362. 1 January 2005

Phosphodiesterase 3A and arterial hypertension.
Ercu, M. and Markó, L. and Schächterle, C. and Tsvetkov, D. and Cui, Y. and Maghsodi, S. and Bartolomaeus, T.U.P. and Maass, P.G. and Zühlke, K. and Gregersen, N. and Hübner, N. and Hodge, R. and Mühl, A. and Pohl, B. and Molé-Illas, R. and Geelhaar, A. and Walter, S. and Napieczynska, H. and Schelenz, S. and Taube, M. and Heuser, A. and Anistan, Y.M. and Qadri, F. and Todiras, M. and Plehm, R. and Popova, E. and Langanki, R. and Eichhorst, J. and Lehmann, M. and Wiesner, B. and Russwurm, M. and Forslund, S.K. and Kamer, I. and Müller, D.N. and Gollasch, M. and Aydin, A. and Bähring, S. and Bader, M. and Luft, F.C. and Klussmann, E.
Circulation 142 (2): 133-149. 14 July 2020

Mutant phosphodiesterase 3A protects from hypertension-induced cardiac damage.
Ercu, M. and Mücke, M.B. and Pallien, T. and Markó, L. and Sholokh, A. and Schächterle, C. and Aydin, A. and Kidd, A. and Walter, S. and Esmati, Y. and McMurray, B.J. and Lato, D.F. and Sunaga-Franze, D.Y. and Dierks, P.H. and Flores, B.I.M. and Walker-Gray, R. and Gong, M. and Merticariu, C. and Zühlke, K. and Russwurm, M. and Liu, T. and Batolomaeus, T.U.P. and Pautz, S. and Schelenz, S. and Taube, M. and Napieczynska, H. and Heuser, A. and Eichhorst, J. and Lehmann, M. and Miller, D.C. and Diecke, S. and Qadri, F. and Popova, E. and Langanki, R. and Movsesian, M.A. and Herberg, F.W. and Forslund, S.K. and Müller, D.N. and Borodina, T. and Maass, P.G. and Bähring, S. and Hübner, N. and Bader, M. and Klussmann, E.
Circulation 146 (23): 1758-1778. 6 December 2022

Caloric restriction is more efficient than physical exercise to protect from cisplatin nephrotoxicity via PPAR-alpha activation.
Estrela, G.R. and Wasinski, F. and Batista, R.O. and Hiyane, M.I. and Felizardo, R.J.F. and Cunha, F. and de Almeida, D.C. and Malheiros, D.M.A.C. and Camara, N.O.S. and Barros, C.C. and Bader, M. and Araujo, R.C.
Frontiers in Physiology 8 : 116. 2 March 2017

MATE-1 modulation by kinin B1 receptor enhances cisplatin efflux from renal cells.
Estrela, G.R. and Wasinski, F. and Felizardo, R.J.F. and Souza, L.L. and Camara, N.O.S. and Bader, M. and Araujo, R.C.
Molecular and Cellular Biochemistry 428 (1): 101-108. April 2017

Angiotensin-converting enzyme inhibitor protects against cisplatin nephrotoxicity by modulating kinin B1 receptor expression and aminopeptidase P activity in mice.
Estrela, G.R. and Wasinski, F. and Gregnani, M.F. and Freitas-Lima, L.C. and Arruda, A.C. and Morais, R.L. and Malheiros, D.M.A.C. and Camara, N.O.S. and Pesquero, J.B. and Bader, M. and Barros, C.C. and Araújo, R.C.
Frontiers in Molecular Biosciences 7 : 96. 20 May 2020

Post-infarct cardiac sympathetic hyperactivity regulates galanin expression.
Ewert, T.J. and Gritman, K.R. and Bader, M. and Habecker, B.A.
Neuroscience Letters 436 (2): 163-166. 9 May 2008

Histone serotonylation is a permissive modification that enhances TFIID binding to H3K4me3.
Farrelly, L.A. and Thompson, R.E. and Zhao, S. and Lepack, A.E. and Lyu, Y. and Bhanu, N.V. and Zhang, B. and Loh, Y.H.E. and Ramakrishnan, A. and Vadodaria, K.C. and Heard, K.J. and Erikson, G. and Nakadai, T. and Bastle, R.M. and Lukasak, B.J. and Zebroski, H. and Alenina, N. and Bader, M. and Berton, O. and Roeder, R.G. and Molina, H. and Gage, F.H. and Shen, L. and Garcia, B.A. and Li, H. and Muir, T.W. and Maze, I.
Nature 567 (7749): 535-539. 28 March 2019

Prorenin and renin-induced extracellular signal-regulated kinase 1/2 activation in monocytes is not blocked by aliskiren or the handle-region peptide.
Feldt, S. and Batenburg, W.W. and Mazak, I. and Maschke, U. and Wellner, M. and Kvakan, H. and Dechend, R. and Fiebeler, A. and Burckle, C. and Contrepas, A. and Danser, A.H. and Bader, M. and Nguyen, G. and Luft, F.C. and Mueller, D.N.
Hypertension 51 (3): 682-688. March 2008

Glucagon-producing cells are increased in Mas-deficient mice.
Felix Braga, J. and Ravizzoni Dartora, D. and Alenina, N. and Bader, M. and Santos, R.A.S.
Endocrine Connections 6 (1): 27-32. January 2017

Cardiac angiotensin-(1-12) expression and systemic hypertension in rats expressing the human angiotensinogen gene.
Ferrario, C.M. and VonCannon, J.L. and Jiao, Y. and Ahmad, S. and Bader, M. and Dell'Italia, L.J. and Groban, L. and Varagic, J.
American Journal of Physiology Heart and Circulatory Physiology 310 (8): H995-H1002. 15 April 2016

Therapeutic targeting of the angiotensin-converting enzyme 2/Angiotensin-(1-7)/Mas cascade in the renin-angiotensin system: a patent review.
Ferreira, A.J. and Bader, M. and Santos, R.A.S.
Expert Opinion on Therapeutic Patents 22 (5): 567-574. May 2012

Attenuation of isoproterenol-induced cardiac fibrosis in transgenic rats harboring an angiotensin-(1-7)-producing fusion protein in the heart.
Ferreira, A.J. and Castro, C.H. and Guatimosim, S. and Almeida, P.W.M. and Gomes, E.R.M. and Dias-Peixoto, M.F. and Alves, M.N.A. and Fagundes-Moura, C.R. and Rentzsch, B. and Gava, E. and Almeida, A.P. and Guimaraes, A.M. and Kitten, G.T. and Reudelhuber, T. and Bader, M. and Santos, R.A.S.
Therapeutic Advances in Cardiovascular Disease 4 (2): 83-96. April 2010

Renal function in transgenic rats expressing an angiotensin-(1-7)-producing fusion protein.
Ferreira, A.J. and Pinheiro, S.V.B. and Castro, C.H. and Silva, G.A.B. and Simoes E Silva, A.C. and Almeida, A.P. and Bader, M. and Rentzsch, B. and Reudelhuber, T.L. and Santos, R.A.S.
Regulatory Peptides 137 (3): 128-133. 10 December 2006

The role of kinin B(1) receptors in the nociception produced by peripheral protein kinase C activation in mice.
Ferreira, J. and Triches, K.M. and Medeiros, R. and Cabrini, D.A. and Mori, M.A.S. and Pesquero, J.B. and Bader, M. and Calixto, J.B.
Neuropharmacology 54 (3): 597-604. March 2008

Reduced nerve injury-induced neuropathic pain in kinin B1 receptor knock-out mice.
Ferreira, J. and Beirith, A. and Mori, M.A. and Araújo, R.C. and Bader, M. and Pesquero, J.B. and Calixto, J.B.
Journal of Neuroscience 25 (9): 2405-2412. 2 March 2005

Regulation of karyopherin alpha1 and nuclear import by mammalian target of rapamycin.
Fielhaber, J.A. and Tan, J. and Joung, K.B. and Attias, O. and Huegel, S. and Bader, M. and Roux, P.P. and Kristof, A.S.
Journal of Biological Chemistry 287 (18): 14325-14335. 27 April 2012

The (pro)renin receptor (ATP6ap2) facilitates receptor-mediated endocytosis and lysosomal function in the renal proximal tubule.
Figueiredo, M. and Daryadel, A. and Sihn, G. and Müller, D.N. and Popova, E. and Rouselle, A. and Nguyen, G. and Bader, M. and Wagner, C.A.
Pflugers Archiv 473 : 1229-1246. August 2021

Behavioral evidence for the significance of serotoninergic (5-HT) receptors in cocaine addiction.
Filip, M. and Alenina, N. and Bader, M. and Przegalinski, E.
Addiction Biology 15 (3): 227-249. July 2010

Overview on 5-HT receptors and their role in physiology and pathology of the central nervous system.
Filip, M. and Bader, M.
Pharmacological Reports 61 (5): 761-777. September 2009

Dietary n-3 polyunsaturated fatty acids and direct renin inhibition improve electrical remodeling in a model of high human renin hypertension.
Fischer, R. and Dechend, R. and Qadri, F. and Markovic, M. and Feldt, S. and Herse, F. and Park, J.K. and Gapelyuk, A. and Schwarz, I. and Zacharzowsky, U.B. and Plehm, R. and Safak, E. and Heuser, A. and Schirdewan, A. and Luft, F.C. and Schunck, W.H. and Mueller, D.N.
Hypertension 51 (2): 540-546. February 2008

Cell divisions are not essential for the direct conversion of fibroblasts into neuronal cells.
Fishman, V.S. and Shnayder, T.A. and Orishchenko, K.E. and Bader, M. and Alenina, N. and Serov, O.L.
Cell Cycle 14 (8): 1188-1196. 15 April 2015

A transgenic rat expressing human APP with the Swedish Alzheimer's disease mutation.
Folkesson, R. and Malkiewicz, K. and Kloskowska, E. and Nilsson, T. and Popova, E. and Bogdanovic, N. and Ganten, U. and Ganten, D. and Bader, M. and Winblad, B. and Benedikz, E.
Biochemical and Biophysical Research Communications 358 (3): 777-782. 6 July 2007

The role of receptor MAS in microglia-driven retinal vascular development.
Foulquier, S. and Caolo, V. and Swennen, G. and Milanova, I. and Reinhold, S. and Recarti, C. and Alenina, N. and Bader, M. and Steckelings, U M. and Vanmierlo, T. and Post, M.J. and Jones, E.A. and van Oostenbrugge, R.J. and Unger, T.
Angiogenesis 22 (4): 481-189. November 2019

Emergence and evolution of the renin-angiotensin-aldosterone system.
Fournier, D. and Luft, F.C. and Bader, M. and Ganten, D. and Andrade-Navarro, M.A.
Journal of Molecular Medicine 90 (5): 495-508. May 2012

An orally active formulation of angiotensin-(1-7) produces an antithrombotic effect.
Fraga-Silva, R.A. and Costa-Fraga, F.P. and Sousa, F.B. and Alenina, N. and Bader, M. and Sinisterra, R.D. and Santos, R.A.
Clinics 66 (5): 837-841. 2011

The antithrombotic effect of angiotensin-(1-7) involves mas-mediated NO release from platelets.
Fraga-Silva, R.A. and Pinheiro, S.V. and Goncalves, A.C. and Alenina, N. and Bader, M. and Santos, R.A.
Molecular Medicine 14 (1-2): 28-35. January 2008

Effects of bradykinin B2 receptor ablation from tyrosine hydroxylase cells on behavioral and motor aspects in male and female mice.
Franco, T.M. and Tavares, M.R. and Novaes, L.S. and Munhoz, C.D. and Peixoto-Santos, J.E. and Araujo, R.C. and Donato, J. and Bader, M. and Wasinski, F.
International Journal of Molecular Sciences 25 (3): 1490. 25 January 2024

Absence of diabetic hyperalgesia in bradykinin B1 receptor-knockout mice.
Gabra, B.H. and Merino, V.F. and Bader, M. and Pesquero, J.B. and Sirois, P.
Regulatory Peptides 127 (1-3): 245-248. 1 January 2005

Importin-α7 is involved in the formation of Ebola virus inclusion bodies but is not essential for pathogenicity in mice.
Gabriel, G. and Feldmann, F. and Reimer, R. and Thiele, S. and Fischer, M. and Hartmann, E. and Bader, M. and Ebihara, H. and Hoenen, T. and Feldmann, H.
Journal of Infectious Diseases 212 (Suppl 2): S316-S321. 1 October 2015

Differential use of importin-alpha isoforms governs cell tropism and host adaptation of influenza virus.
Gabriel, G. and Klingel, K. and Otte, A. and Thiele, S. and Hudjetz, B. and Arman-Kalcek, G. and Sauter, M. and Shmidt, T. and Rother, F. and Baumgarte, S. and Keiner, B. and Hartmann, E. and Bader, M. and Brownlee, G.G. and Fodor, E. and Klenk, H.D.
Nature Communications 2 (1): 156. January 2011

An old couple: the renin-angiotensin system (RAS) and the Journal of Molecular Medicine (JMolMed).
Ganten, D. and Bader, M. and Juergensen, J.S.
Journal of Molecular Medicine 86 (6): 609-610. June 2008

Cardiac magnetic field mapping quantified by Kullback-Leibler entropy detects patients with coronary artery disease.
Gapelyuk, A. and Schirdewan, A. and Fischer, R. and Wessel, N.
Physiological Measurement 31 (10): 1345-1354. October 2010

Angiotensin-(1-7) receptor Mas is an essential modulator of extracellular matrix protein expression in the heart.
Gava, E. and de Castro, C.H. and Ferreira, A.J. and Colleta, H. and Melo, M.B. and Alenina, N. and Bader, M. and Oliveira, L.A. and Santos, R.A.S. and Kitten, G.T.
Regulatory Peptides 175 (1-3): 30-42. 10 April 2012

Priming of LTP in amygdala and hippocampus by prior paired pulse facilitation paradigm in mice lacking brain serotonin.
Gebhardt, C. and Mosienko, V. and Alenina, N. and Albrecht, D.
Hippocampus 29 (7): 610-618. July 2019

Large-scale mapping of mutations affecting zebrafish development.
Geisler, R. and Rauch, G.J. and Geiger-Rudolph, S. and Albrecht, A. and van Bebber, F. and Berger, A. and Busch-Nentwich, E. and Dahm, R. and Dekens, M.P. and Dooley, C. and Elli, A.F. and Gehring, I. and Geiger, H. and Geisler, M. and Glaser, S. and Holley, S. and Huber, M. and Kerr, A. and Kirn, A. and Knirsch, M. and Konantz, M. and Kuechler, A.M. and Maderspacher, F. and Neuhauss, S.C. and Nicolson, T. and Ober, E.A. and Praeg, E. and Ray, R. and Rentzsch, B. and Rick, J.M. and Rief, E. and Schauerte, H.E. and Schepp, C.P. and Schoenberger, U. and Schonthaler, H.B. and Seiler, C. and Sidi, S. and Soellner, C. and Wehner, A. and Weiler, C. and Nuesslein-Volhard, C.
BMC Genomics 8 : 11. 9 January 2007

SDF-1alpha as a therapeutic stem cell homing factor in myocardial infarction.
Ghadge, S.K. and Muehlstedt, S. and Oezcelik, C. and Bader, M.
Pharmacology & Therapeutics 129 (1): 97-108. January 2011

Working memory deficits in transgenic rats overexpressing human adenosine A(2A) receptors in the brain.
Gimenez-Llort, L. and Schiffmann, S.N. and Shmidt, T. and Canela, L. and Camon, L. and Wassholm, M. and Canals, M. and Terasmaa, A. and Fernandez-Teruel, A. and Tobena, A. and Popova, E. and Ferre, S. and Agnati, L. and Ciruela, F. and Martinez, E. and Scheel-Kruger, J. and Lluis, C. and Franco, R. and Fuxe, K. and Bader, M.
Neurobiology of Learning Memory 87 (1): 42-56. January 2007

Cytoplasmic fatty acid-binding protein facilitates fatty acid utilization by skeletal muscle.
Glatz, J.F.C. and Schaap, F.G. and Binas, B. and Bonen, A. and van der Vusse, G.J. and Luiken, J.J.F.P.
Acta Physiologica Scandinavica 178 (4): 367-371. August 2003

Continuous blood glucose monitoring reveals enormous circadian variations in pregnant diabetic rats.
Golic, M. and Kräker, K. and Fischer, C. and Alenina, N. and Haase, N. and Herse, F. and Schütte, T. and Henrich, W. and Müller, D.N. and Busjahn, A. and Bader, M. and Dechend, R.
Frontiers in Endocrinology 9 : 271. 29 May 2018

Diabetes mellitus in pregnancy leads to growth restriction and epigenetic modification of the Srebf2 gene in rat fetuses.
Golic, M. and Stojanovska, V. and Bendix, I. and Wehner, A. and Herse, F. and Haase, N. and Kräker, K. and Fischer, C. and Alenina, N. and Bader, M. and Schütte, T. and Schuchardt, M. and van der Giet, M. and Henrich, W. and Muller, D.N. and Felderhoff-Müser, U. and Scherjon, S. and Plösch, T. and Dechend, R.
Hypertension 71 (5): 911-920. May 2018

Angiotensin-(1-7) prevents cardiomyocyte pathological remodeling through a nitric oxide/guanosine 3',5'-cyclic monophosphate-dependent pathway.
Gomes, E.R. and Lara, A.A. and Almeida, P.W. and Guimaraes, D. and Resende, R.R. and Campagnole-Santos, M.J. and Bader, M. and Santos, R.A. and Guatimosim, S.
Hypertension 55 (1): 153-160. January 2010

Cardiovascular responses evoked by activation or blockade of GABA(A) receptors in the hypothalamic PVN are attenuated in transgenic rats with low brain angiotensinogen.
Gomes da Silva, A.Q. and Xavier, C.H. and Campagnole-Santos, M.J. and Caligiorne, S.M. and Baltatu, O.C. and Bader, M. and Santos, R.A. and Fontes, M.A.
Brain Research 1448 : 101-110. 11 April 2012

Dual effect of chemokine CCL7/MCP-3 in the development of renal tubulointerstitial fibrosis.
Gonzalez, J. and Mouttalib, S. and Delage, C. and Calise, D. and Maoret, J.J. and Pradere, J.P. and Klein, J. and Buffin-Meyer, B. and Van der Veen, B. and Charo, I.F. and Heeringa, P. and Duchene, J. and Bascands, J.L. and Schanstra, J.P.
Biochemical and Biophysical Research Communications 438 (2): 257-263. 23 August 2013

Cpxm2 as a novel candidate for cardiac hypertrophy and failure in hypertension.
Grabowski, K. and Herlan, L. and Witten, A. and Qadri, F. and Eisenreich, A. and Lindner, D. and Schädlich, M. and Schulz, A. and Subrova, J. and Mhatre, K.N. and Primessnig, U. and Plehm, R. and van Linthout, S. and Escher, F. and Bader, M. and Stoll, M. and Westermann, D. and Heinzel, F.R. and Kreutz, R.
Hypertension Research 45 : 292-307. January 2022

Stress-induced dilated cardiomyopathy in a knock-in mouse model mimicking human titin-based disease.
Gramlich, M. and Michely, B. and Krohne, C. and Heuser, A. and Erdmann, B. and Klaassen, S. and Hudson, B. and Magarin, M. and Kirchner, F. and Todiras, M. and Granzier, H. and Labeit, S. and Thierfelder, L. and Gerull, B.
Journal of Molecular and Cellular Cardiology 47 (3): 352-358. September 2009

Role of kinin B2 receptors in opioid-induced-hyperalgesia in inflammatory pain in mice.
Grastilleur, S. and Mouledous, L. and Bedel, J. and Etcheverry, J. and Bader, M. and Girolami, J.P. and Fourcade, O. and Frances, B. and Minville, V.
Biological Chemistry 394 (3): 361-368. March 2013

Energy metabolism in human renin-gene transgenic rats. Does renin contribute to obesity?
Gratze, P. and Boschmann, M. and Dechend, R. and Qadri, F. and Malchow, J. and Graeske, S. and Engeli, S. and Janke, J. and Springer, J. and Contrepas, A. and Plehm, R. and Klaus, S. and Nguyen, G. and Luft, F.C. and Mueller, D.N.
Hypertension 53 (3): 516-523. March 2009

Novel role for inhibitor of differentiation 2 in the genesis of angiotensin II-induced hypertension.
Gratze, P. and Dechend, R. and Stocker, C. and Park, J.K. and Feldt, S. and Shagdarsuren, E. and Wellner, M. and Gueler, F. and Rong, S. and Gross, V. and Obst, M. and Plehm, R. and Alenina, N. and Zenclussen, A. and Titze, J. and Small, K. and Yokota, Y. and Zenke, M. and Luft, F.C. and Mueller, D.N.
Circulation 117 (20): 2645-2656. 20 May 2008

Kinin B1 receptor modulates glucose homeostasis and physical exercise capacity by altering adrenal catecholamine synthesis and secretion.
Gregnani, M.F. and Budu, A. and Batista, R.O. and Ornellas, F.H. and Estrela, G.R. and Arruda, A.C. and Freitas-Lima, L.C. and Kremer, J.L. and Favaroni Mendes, L.A. and Casarini, D.E. and Lotfi, C.F.P. and Oyama, L.M. and Bader, M. and Araujo, R.C.
Molecular and Cellular Endocrinology 579 : 112085. 1 January 2024

Bradykinin B2 receptor signaling increases glucose uptake and oxidation: evidence and open questions.
Gregnani, M.F. and Hungaro, T.G. and Martins-Silva, L. and Bader, M. and Araujo, R.C.
Frontiers in Pharmacology 11 : 1162. 4 August 2020

Alternative splicing and extensive RNA editing of human TPH2 transcripts.
Grohmann, M. and Hammer, P. and Walther, M. and Paulmann, N. and Buettner, A. and Eisenmenger, W. and Baghai, T.C. and Schuele, C. and Rupprecht, R. and Bader, M. and Bondy, B. and Zill, P. and Priller, J. and Walther, D.J.
PLoS ONE 5 (1): e8956. 29 January 2010

Restricted mobility of Dnmt1 in preimplantation embryos: implications for epigenetic reprogramming.
Grohmann, M. and Spada, F. and Schermelleh, L. and Alenina, N. and Bader, M. and Cardoso, M.C. and Leonhardt, H.
BMC Developmental Biology 5 : 18. 24 August 2005

Receptors, G proteins, and integration of calcium signalling.
Gudermann, T. and Bader, M.
Journal of Molecular Medicine 93 (9): 937-940. September 2015

Exercise induces renin-angiotensin system unbalance and high collagen expression in the heart of Mas-deficient mice.
Guimaraes, G.G. and Santos, S.H.S. and Oliveira, M.L. and Pimenta-Veloso, E.P. and Motta, D.F. and Martins, A.S. and Alenina, N. and Bader, M. and Santos, R.A.S. and Campagnole-Santos, M.J.
Peptides 38 (1): 54-61. November 2012

Angiotensin II binding to angiotensin I-converting enzyme triggers calcium signaling.
Guimaraes, P.B. and Alvarenga, E.C. and Siqueira, P.D. and Paredes-Gamero, E.J. and Sabatini, R.A. and Morais, R.L. and Reis, R.I. and Santos, E.L. and Teixeira, L.G. and Casarini, D.E. and Martin, R.P. and Shimuta, S.I. and Carmona, A.K. and Nakaie, C.R. and Jasiulionis, M.G. and Ferreira, A.T. and Pesquero, J.L. and Oliveira, S.M. and Bader, M. and Costa-Neto, C.M. and Pesquero, J.B.
Hypertension 57 (5): 965-972. May 2011

Interactions between carboxypeptidase M and kinin B1 receptor in endothelial cells.
Guimarães, P.B. and da Silva, R.F. and Hoff, C.C. and Fernandes, L. and Nakaie, C.R. and Chagas, J.R. and Karaoglanovic Carmona, A. and Bader, M. and Pesquero, J.B.
Inflammation Research 68 (10): 845-855. October 2019

Relaxin does not improve angiotensin II-induced target-organ damage.
Haase, N. and Rugor, J. and Przybyl, L. and Qadri, F. and Müller, D.N. and Dechend, R.
PLoS ONE 9 (4): e93743. 7 April 2014

Rats overexpressing the dopamine transporter display behavioral and neurobiological abnormalities with relevance to repetitive disorders.
Hadar, R. and Edemann-Callesen, H. and Reinel, C. and Wieske, F. and Voget, M. and Popova, E. and Sohr, R. and Avchalumov, Y. and Priller, J. and van Riesen, C. and Puls, I. and Bader, M. and Winter, C.
Scientific Reports 6 : 39145. 15 December 2016

The effect of brain serotonin deficit (TPH2-KO) on the expression and activity of liver cytochrome P450 enzymes in aging male Dark Agouti rats.
Haduch, A. and Bromek, E. and Kuban, W. and Basińska-Ziobroń, A. and Danek, P.J. and Alenina, N. and Bader, M. and Daniel, W.A.
Pharmacological Reports 75 (6): 1522-1532. December 2023

Cytochrome P450 2D (CYP2D) enzyme dysfunction associated with aging and serotonin deficiency in the brain and liver of female Dark Agouti rats.
Haduch, A. and Danek, P.J. and Kuban, W. and Pukło, R. and Alenina, N. and Gołębiowska, J. and Popik, P. and Bader, M. and Daniel, W.A.
Neurochemistry International 152 : 105223. January 2022

The effect of ageing and cerebral serotonin deficit on the activity of cytochrome P450 2D (CYP2D) in the brain and liver of male rats.
Haduch, A. and Pukło, R. and Alenina, N. and Nikiforuk, A. and Popik, P. and Bader, M. and Daniel, W.A.
Neurochemistry International 141 : 104884. December 2020

Serum amyloid A1 mediates myotube atrophy via Toll-like receptors.
Hahn, A. and Kny, M. and Pablo-Tortola, C. and Todiras, M. and Willenbrock, M. and Schmidt, S. and Schmoeckel, K. and Jorde, I. and Nowak, M. and Jarosch, E. and Sommer, T. and Bröker, B.M. and Felix, S.B. and Scheidereit, C. and Weber-Carstens, S. and Butter, C. and Luft, F.C. and Fielitz, J.
Journal of Cachexia Sarcopenia and Muscle 11 (1): 103-119. February 2020

Beyond gene inactivation: evolution of tools for analysis of serotonergic circuitry.
Hainer, C. and Mosienko, V. and Koutsikou, S. and Crook, J.J. and Gloss, B. and Kasparov, S. and Lumb, B.M. and Alenina, N.
ACS Chemical Neuroscience 6 (7): 1116-1129. 15 July 2015

Role of the receptor Mas in macrophage-mediated inflammation in vivo.
Hammer, A. and Yang, G. and Friedrich, J. and Kovacs, A. and Lee, D.H. and Grave, K. and Jörg, S. and Alenina, N. and Grosch, J. and Winkler, J. and Gold, R. and Bader, M. and Manzel, A. and Rump, L.C. and Müller, D.N. and Linker, R.A. and Stegbauer, J.
Proceedings of the National Academy of Sciences of the United States of America 113 (49): 14109-14114. 6 December 2016

Central control of fever and female body temperature by RANKL/RANK.
Hanada, R. and Leibbrandt, A. and Hanada, T. and Kitaoka, S. and Furuyashiki, T. and Fujihara, H. and Trichereau, J. and Paolino, M. and Qadri, F. and Plehm, R. and Klaere, S. and Komnenovic, V. and Mimata, H. and Yoshimatsu, H. and Takahashi, N. and von Haeseler, A. and Bader, M. and Kilic, S.S. and Ueta, Y. and Pifl, C. and Narumiya, S. and Penninger, J.M.
Nature 462 (7272): 505-509. 26 November 2009

Tail-cuff versus radiotelemetry to measure blood pressure in mice and rats.
Harrison, D.G. and Bader, M. and Lerman, L.O. and Fink, G. and Karumanchi, S.A. and Reckelhoff, J.F. and Sequeira-Lopez, M.L.S. and Touyz, R.M.
Hypertension 81 (1): 3-5. January 2024

Support for the involvement of TPH2 gene in affective disorders.
Harvey, M. and Shink, E. and Tremblay, M. and Gagne, B. and Raymond, C. and Labbe, M. and Walther, D.J. and Bader, M. and Barden, N.
Molecular Psychiatry 9 (11): 980-981. 20 July 2004

Investigating the link between MCP-1 A-2518G, RANTES G-403A, CX3CR1 V249I and MTHFR C677T gene polymorphisms and the risk of acute myocardial infarction among Egyptians.
Hashad, I.M. and Abdel Rahman, M.F. and Alenina, N. and Bader, M. and Gad, M.Z.
Meta Gene 11 : 181-188. February 2017

Unique expression pattern of a novel mosaic receptor in the developing cerebral cortex.
Hermans-Borgmeyer, I. and Hampe, W. and Schinke, B. and Methner, A. and Nykjaer, A. and Suesens, U. and Fenger, U. and Herbarth, B. and Schaller, H.C.
Mechanisms of Development 70 (1-2): 65-76. January 1998

B2 cells contribute to hypertension and natural killer cell activation possibly via AT1-AA in response to placental ischemia.
Herrock, O.T. and Deer, E. and Amaral, L.M. and Campbell, N. and Lemon, J. and Ingram, N. and Cornelius, D.C. and Turner, T. and Fitzgerald, S. and Ibrahim, T. and Dechend, R. and Wallukat, G. and LaMarca, B.
American Journal of Physiology Renal Physiology 324 (2): F179-F192. February 2023

Arteriogenesis is modulated on bradykinin receptor signaling.
Hillmeister, P. and Gatzke, N. and Duelsner, A. and Bader, M. and Schadock, I. and Hoefer, I. and Hamann, I. and Infante-Duarte, C. and Jung, G. and Troidl, K. and Urban, D. and Stawowy, P. and Frentsch, M. and Li, M. and Nagorka, S. and Wang, H. and Shi, Y. and le Noble, F. and Buschmann, I.
Circulation Research 109 (5): 524-533. 19 August 2011

Autonomic dysregulation in ob/ob mice is improved by inhibition of angiotensin-converting enzyme.
Hilzendeger, A.M. and da Costa Goncalves, A.C. and Plehm, R. and Diedrich, A. and Gross, V. and Pesquero, J.B. and Bader, M.
Journal of Molecular Medicine 88 (4): 383-390. April 2010

Leptin regulates ACE activity in mice.
Hilzendeger, A.M. and Morais, R.L. and Todiras, M. and Plehm, R. and da Costa Goncalves, A. and Qadri, F. and Araujo, R.C. and Gross, V. and Nakaie, C.R. and Casarini, D.E. and Carmona, A.K. and Bader, M. and Pesquero, J.B.
Journal of Molecular Medicine 88 (9): 899-907. September 2010

Controlling cardiomyocyte length: The role of renin and PPAR-γ.
Hinrichs, S. and Heger, J. and Schreckenberg, R. and Wenzel, S. and Euler, G. and Arens, C. and Bader, M. and Rosenkranz, S. and Caglayan, E. and Schlueter, K.D.
Cardiovascular Research 89 (2): 344-352. 1 February 2011

Agonistic autoantibodies against β2-adrenergic receptor influence retinal microcirculation in glaucoma suspects and patients.
Hohberger, B. and Hosari, S. and Wallukat, G. and Kunze, R. and Krebs, J. and Müller, M. and Hennig, T. and Lämmer, R. and Horn, F. and Muñoz, L.E. and Herrmann, M. and Mardin, C.
PLoS ONE 16 (5): e0249202. 7 May 2021

Agonistic β2-adrenergic receptor autoantibodies characterize the aqueous humor of patients with primary and secondary open-angle glaucoma.
Hohberger, B. and Wörn, M. and Lämmer, R. and Mahajan, A. and Mardin, C. and Schötzer-Schrehardt, U. and Kunze, R. and Herrmann, M. and Wallukat, G.
Frontiers in Immunology 12 : 550236. 5 May 2021

The vesicular monoamine content regulates VMAT2 activity through G α(q) mouse platelets - evidence for autoregulation of vesicular transmitter update.
Holtje, M. and Winter, S. and Walther, D. and Pahner, I. and Hortnagl, H. and Ottersen, O.P. and Bader, M. and Ahnert-Hilger, G.
Journal of Biological Chemistry 278 (18): 15850-15858. 2 May 2003

The continued need for animals to advance brain research.
Homberg, J.R. and Adan, R.A.H. and Alenina, N. and Asiminas, A. and Bader, M. and Beckers, T. and Begg, D.P. and Blokland, A. and Burger, M.E. and van Dijk, G. and Eisel, U.L.M. and Elgersma, Y. and Englitz, B. and Fernandez-Ruiz, A. and Fitzsimons, C.P. and van Dam, A.M. and Gass, P. and Grandjean, J. and Havekes, R. and Henckens, M.J.A.G. and Herden, C. and Hut, R.A. and Jarrett, W. and Jeffrey, K. and Jezova, D. and Kalsbeek, A. and Kamermans, M. and Kas, M.J. and Kasri, N.N. and Kiliaan, A.J. and Kolk, S.M. and Korosi, A. and Korte, S.M. and Kozicz, T. and Kushner, S.A. and Leech, K. and Lesch, K.P. and Lesscher, H. and Lucassen, P.J. and Luthi, A. and Ma, L. and Mallien, A.S. and Meerlo, P. and Mejias, J.F. and Meye, F.J. and Mitchell, A.S. and Mul, J.D. and Olcese, U. and González, A.O. and Olivier, J.D.A. and Pasqualetti, M. and Pennartz, C.M.A. and Popik, P. and Prickaerts, J. and de la Prida, L.M. and Ribeiro, S. and Roozendaal, B. and Rossato, J.I. and Salari, A.A. and Schoemaker, R.G. and Smit, A.B. and Vanderschuren, L.J.M.J. and Takeuchi, T. and van der Veen, R. and Smidt, M.P. and Vyazovskiy, V.V. and Wiesmann, M. and Wierenga, C.J. and Williams, B. and Willuhn, I. and Wöhr, M. and Wolvekamp, M. and van der Zee, E.A. and Genzel, L.
Neuron 109 (15): 2374-2379. 4 August 2021

Comeback of the rat in biomedical research.
Homberg, J.R. and Woehr, M. and Alenina, N.
ACS Chemical Neuroscience 8 (5): 900-903. 17 May 2017

Genetic deletion of the Angiotensin-(1-7) receptor Mas leads a reduced ovulatory rate.
Honorato-Sampaio, K. and Ferreira Andrade, R. and Bader, M. and de Souza Martins, A. and Souza Santos, R.A. and Reis, A.M.
Peptides 107 : 83-88. September 2018