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Mutations in CLCN6 as a novel genetic cause of neuronal ceroid lipofuscinosis in patients and a murine model

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Item Type:Article
Title:Mutations in CLCN6 as a novel genetic cause of neuronal ceroid lipofuscinosis in patients and a murine model
Creators: He, H. ORCID logoORCID: https://orcid.org/0000-0002-1095-4786, Cao, X. ORCID logoORCID: https://orcid.org/0000-0003-4620-1513, He, F. ORCID logoORCID: https://orcid.org/0000-0002-7627-0424, Zhang, W. ORCID logoORCID: https://orcid.org/0000-0003-4391-8199, Wang, X. ORCID logoORCID: https://orcid.org/0000-0002-8491-244X, Peng, P. ORCID logoORCID: https://orcid.org/0000-0002-3677-3676, Xie, C. ORCID logoORCID: https://orcid.org/0000-0002-9356-2189, Yin, F. ORCID logoORCID: https://orcid.org/0000-0002-7192-6308, Li, D. ORCID logoORCID: https://orcid.org/0009-0003-0753-8436, Li, J. ORCID logoORCID: https://orcid.org/0000-0002-4236-3518, Wang, M. ORCID logoORCID: https://orcid.org/0009-0009-7947-0681, Klüssendorf, M. ORCID logoORCID: https://orcid.org/0000-0001-6790-8951, Jentsch, T.J. ORCID logoORCID: https://orcid.org/0000-0002-3509-2553, Stauber, T. ORCID logoORCID: https://orcid.org/0000-0003-0727-6109 and Peng, J. ORCID logoORCID: https://orcid.org/0000-0002-7752-6962
Abstract:OBJECTIVE: The aim of this study was to explore the pathogenesis of CLCN6-related disease and to assess whether its Cl−/H+-exchange activity is crucial for the biological role of ClC-6. METHODS: We performed whole-exome sequencing on a girl with development delay, intractable epilepsy, behavioral abnormities, retinal dysfunction, progressive brain atrophy, suggestive of neuronal ceroid lipofuscinoses (NCLs). We generated and analyzed the first knock-in mouse model of a patient variant (p.E200A) and compared it with a Clcn6−/− mouse model. Additional functional tests were performed with heterologous expression of mutant ClC-6. RESULTS: We identified a de novo heterozygous p.E200A variant in the proband. Expression of disease-causing ClC-6E200A or ClC-6Y553C mutants blocked autophagic flux and activated transcription factors EB (TFEB) and E3 (TFE3), leading to autophagic vesicle and cholesterol accumulation. Such alterations were absent with a transport-deficient ClC-6E267A mutant. Clcn6E200A/+ mice developed severe neurodegeneration with typical features of NCLs. Mutant ClC-6E200A, but not loss of ClC-6 in Clcn6−/− mice, increased lysosomal biogenesis by suppressing mTORC1-TFEB signaling, blocked autophagic flux through impairing lysosomal function, and increased apoptosis. Carbohydrate and lipid deposits accumulated in Clcn6E200A/+ brain, while only lipid storage was found in Clcn6−/− brain. Lysosome dysfunction, autophagy defects, and gliosis were early pathogenic events preceding neuron loss. INTERPRETATION: CLCN6 is a novel genetic cause of NCLs, highlighting the importance of considering CLCN6 mutations in the diagnostic workup for molecularly undefined forms of NCLs. Uncoupling of Cl− transport from H+ countertransport in the E200A mutant has a dominant effect on the autophagic/lysosomal pathway.
Keywords:Animal Disease Models, Autophagy, Chloride Channels, Exome Sequencing, Membrane Proteins, Mutation, Neuronal Ceroid-Lipofuscinoses, Animals, Mice
Source:Annals of Neurology
ISSN:0364-5134
Publisher:Wiley
Volume:96
Number:3
Page Range:608-624
Date:September 2024
Additional Information:Erratum in: Ann Neurol 9 Aug 2024. Erratum in: Ann Neurol 28 Aug 2024.
Official Publication:https://doi.org/10.1002/ana.27002
PubMed:View item in PubMed

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