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Items where Year is 2024

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A

Transcript-specific enrichment enables profiling rare cell states via scRNA-seq.
Abay, T., Stickels, R.R., Takizawa, M.T., Nalbant, B.N., Hsieh, Y.H., Hwang, S., Snopkowski, C., Yu, K.K.H., Abou-Mrad, Z., Tabar, V., Ludwig, L.S., Chaligne, R., Satpathy, A.T. and Lareau, C.A.
bioRxiv : 2024.03.27.587039. 27 March 2024

Sensor macrophages derived from human induced pluripotent stem cells to assess pyrogenic contaminations in parenteral drugs.
Abdin, S.M., Mansel, F., Rafiei Hashtchin, A., Ackermann, M., Hansen, G., Becker, B., Kick, B., Pham, N., Dietz, H., Schaniel, C., Martin, U., Spreitzer, I. and Lachmann, N.
Biofabrication 16 (3): 035017. July 2024

The patient-reported outcomes for the new brand-generic teriflunomide in relapsing-remitting multiple sclerosis.
Abolfazli, R., Nabavi, S.M., Azimi, A., Nahayati, M., Gharagozli, K., Torabi, H., Ghazaeian, M., Rezagholi, Z. and Samadzadeh, S.
Clinical Neurology and Neurosurgery 246 : 108552. November 2024

Genetic determinants of micronucleus formation in vivo.
Adams, D.J., Barlas, B., McIntyre, R.E., Salguero, I., van der Weyden, L., Barros, A., Vicente, J.R., Karimpour, N., Haider, A., Ranzani, M., Turner, G., Thompson, N.A., Harle, V., Olvera-León, R., Robles-Espinoza, C.D., Speak, A.O., Geisler, N., Weninger, W.J., Geyer, S.H., Hewinson, J., Karp, N.A., Fu, B., Yang, F., Kozik, Z., Choudhary, J., Yu, L., van Ruiten, M.S., Rowland, B.D., Lelliott, C.J., Del Castillo Velasco-Herrera, M., Verstraten, R., Bruckner, L., Henssen, A.G., Rooimans, M.A., de Lange, J., Mohun, T.J., Arends, M.J., Kentistou, K.A., Coelho, P.A., Zhao, Y., Zecchini, H., Perry, J.R.B., Jackson, S.P. and Balmus, G.
Nature 627 (8002): 130-136. 7 March 2024

Disrupting TSLP-TSLP receptor interactions via putative small molecule inhibitors yields a novel and efficient treatment option for atopic diseases.
Adhikary, P.P., Idowu, T., Tan, Z., Hoang, C., Shanta, S., Dumbani, M., Mappalakayil, L., Awasthi, B., Bermudez, M., Weiner, J., Beule, D., Wolber, G., Page, B.D. and Hedtrich, S.
EMBO Molecular Medicine 16 (7): 1630-1656. 15 July 2024

At home e-based physical exercise programs in patients with multiple sclerosis: a scoping review.
Adnan, R., Roikjaer, S.G., Samadzadeh, S., Richter, C.J., Weinshenker, B.G., Paul, F., Skou, S.T., Dalgas, U. and Asgari, N.
Frontiers in Neurology 15 : 1449519. 15 October 2024

The gut microbiome strongly mediates the impact of lifestyle combined variables on cardiometabolic phenotypes.
Adriouch, S., Belda, E., Swartz, T.D., Forslund, S., Le Roy, Ti., Prifti, E., Aron-Wisnewsky, J., Chakaroun, R., Nielsen, T., Andrikopoulos, P., Chechi, K., Puig-Castellví, F., Froguel, P., Holmes, B., Alili, R., Andreelli, F., Soula, H., Salem, J.E., Falony, G., Vieira-Silva, S., Galazzo, Gi., Raes, J., Bork, P., Stumvoll, M., Pedersen, O., Ehrlich, S.D., Dumas, M.E., Oppert, J.M., Dao, M.C., Zucker, J.D. and Clément, K.
medRxiv : 2024.01.12.24301195v2. 17 January 2024

Rigorous science demands support of transgender scientists.
Aghi, K., Anderson, B.M., Castellano, B.M., Cunningham, A., Delano, M., Dickinson, E.S., von Diezmann, L., Forslund-Startceva, S.K., Grijseels, D.M., Groh, S.S., Guthman, E.M., Jayasinghe, I., Johnston, J., Long, S., McLaughlin, J.F., McLaughlin, M., Miyagi, M., Rajaraman, B., Sancheznieto, F., Scheim, A.I., Sun, S.E.D., Titmuss, F.D., Walsh, R.J. and Weinberg, Z.Y.
Cell 187 (6): 1327-1334. 14 March 2024

Calibration-free parallel transmission of the cervical, thoracic, and lumbar spinal cord at 7T.
Aigner, C.S., Sánchez Alarcon, M.F., D'Astous, A., Alonso-Ortiz, E., Cohen-Adad, J. and Schmitter, S.
Magnetic Resonance in Medicine 92 (4): 1496-1510. October 2024

Donor-derived cell-free DNA monitoring for early diagnosis of antibody-mediated rejection after kidney transplantation: a randomized trial.
Akifova, A., Budde, K., Amann, K., Buettner-Herold, M., Choi, M., Oellerich, M., Beck, J., Bornemann-Kolatzki, K., Schütz, E., Bachmann, F., Halleck, F., von Hoerschelmann, E., Koch, N., Schrezenmeier, E., Seelow, E., Waiser, J., Zukunft, B., Eckardt, K.U., Halbritter, J., Kettritz, R., Del Moral, C.L., Lachmann, N., Stauch, D., Niemann, M., Schmidt, D., Halloran, P.F. and Osmanodja, B.
Nephrology Dialysis Transplantation 29 November 2024 (In Press)

Enhancing biomarker-based oncology trial matching using large language models.
Al Khoury, N., Shaik, M., Wurmus, R. and Akalin, A.
bioRxiv : 2024.09.13.612922. 19 September 2024

Sex-specific molecular signature of mouse podocytes in homeostasis and in response to pharmacological challenge with rapamycin.
Al-Diab, O., Sünkel, C., Blanc, E., Catar, R.A., Ashraf, M.I., Zhao, H., Wang, P., Rinschen, M.M., Fritsche-Guenther, R., Grahammer, F., Bachmann, S., Beule, D., Kirwan, J.A., Rajewsky, N., Huber, T.B., Gürgen, D. and Kusch, A.
Biology of Sex Differences 15 (1): 72. 15 September 2024

Teclistamab-induced remission in refractory systemic lupus erythematosus.
Alexander, T., Krönke, J., Cheng, Q., Keller, U. and Krönke, G.
New England Journal of Medicine 391 (9): 864-866. 5 September 2024

Cardiovascular multimodality imaging in women. A scientific statement of the European Association of Cardiovascular Imaging (EACVI) of the ESC.
Almeida, A.G., Grapsa, J., Gemelli, A., Bucciarelli-Ducci, C., Gerber, B., Ajmone-Marsan, N., Bernard, A., Donal, E., Dweck, M.R, Haugaa, K.H., Hristova, K., Maceira, A., Mandoli, G.E., Mulvagh, S., Morrone, D., Plonska-Gosciniak, E., Sade, L.E., Schivalkar, B., Schulz-Menger, J., Shaw, L., Sitges, M., von Kemp, B., Pinto, F.J., Edvardsen, T., Petersen, S.E. and Cosyns, B.
European Heart Journal - Cardiovascular Imaging 25 (4): e116-e136. April 2024

Poor decision making and sociability impairment following central serotonin reduction in inducible TPH2-knockdown rats.
Alonso, L., Peeva, P., Fernández-del Valle Alquicira, T., Erdelyi, N., Gil Nolskog, Á., Bader, M., Winter, Y., Alenina, N. and Rivalan, M.
International Journal of Molecular Sciences 25 (9): 5003. May 2024

Cognitive-motor interference in multiple sclerosis and healthy controls: results from single, dual, and triple task posturography.
Althoff, P., Rosenthal, F., Dorsch, E.M., Drebinger, D., Arsenova, R., Chorschew, A., Rosenkranz, S.C., Bellmann-Strobl, J., Heesen, C., Paul, F., Weygandt, M. and Schmitz-Hübsch, T.
Exploration of Neuroprotective Therapy 4 : 273-287. 12 June 2024

Single-nucleus and spatial transcriptome reveal adrenal homeostasis in normal and tumoural adrenal glands.
Altieri, B., Secener, A.K., Sai, S., Fischer, C., Sbiera, S., Arampatzi, P., Kircher, S., Herterich, S., Landwehr, L.S., Vitcetz, S.N., Braeuning, C., Fassnacht, M., Ronchi, C.L. and Sauer, S.
Clinical and Translational Medicine 14 (8): e1798. August 2024

Anxiolytic effect of alamandine in male transgenic rats with low brain angiotensinogen is dependent on activation of MrgD receptors.
Amado Costa, L., Oliveira Amaral, L.B., Mourão, F.A.G., Bader, M., Santos, R.A.S., Campagnole-Santos, M.J. and Kangussu, L.M.
Hormones and Behavior 163 : 105551. 27 April 2024

A roadmap for therapeutic discovery in pulmonary hypertension associated with left heart failure. A scientific statement of the Heart Failure Association (HFA) of the ESC and the ESC Working Group on pulmonary circulation & right ventricular function.
Ameri, P., Mercurio, V., Pollesello, P., Anker, M.S., Backs, Jo., Bayes-Genis, A., Borlaug, B.A., Burkhoff, D., Caravita, S., Chan, S.Y., de Man, F., Giannakoulas, G., González, A., Guazzi, M., Hassoun, P.M., Hemnes, A.R., Maack, C., Madden, B., Melenovsky, V., Müller, O.J., Papp, Z., Pullamsetti, S.S., Rainer, P.P., Redfield, M.M., Rich, S., Schiattarella, G.G., Skaara, H., Stellos, K., Tedford, R.J., Thum, T., Vachiery, J.L., van der Meer, P., Van Linthout, S., Pruszczyk, P., Seferovic, P., Coats, A.J.S., Metra, M., Rosano, G., Rosenkranz, S. and Tocchetti, C.G.
European Journal of Heart Failure 26 (4): 707-729. April 2024

Segmental patterning of microbiota and immune cells in the murine intestinal tract.
Anandakumar, H., Rauch, A., Wimmer, M.I., Yarritu, A., Koch, G., McParland, V., Bartolomaeus, H. and Wilck, N.
Gut Microbes 16 (1): 2398126. 2024

Emerging MRI and biofluid biomarkers in the diagnosis and prognosis of multiple sclerosis.
Anderhalten, L., Wohlrab, F. and Paul, F.
Lancet Regional Health - Europe 44 : 101023. September 2024

Rapid MR elastography of the liver for subsecond stiffness sampling.
Anders, M., Meyer, T., Warmuth, C., Pfeuffer, J., Tzschaetzsch, H., Herthum, H., Shahryari, M., Degenhardt, K., Wieben, O., Schmitter, S., Schulz-Menger, J., Schaeffter, T., Braun, J. and Sack, I.
Magnetic Resonance in Medicine 91 (1): 312-324. January 2024

Predicting disease severity in multiple sclerosis using multimodal data and machine learning.
Andorra, M., Freire, A., Zubizarreta, I., de Rosbo, N.K., Bos, S.D., Rinas, M., Høgestøl, E.A., de Rodez Benavent, S.A., Berge, T., Brune-Ingebretse, S., Ivaldi, F., Cellerino, M., Pardini, M., Vila, G., Pulido-Valdeolivas, I., Martinez-Lapiscina, E.H., Llufriu, S., Saiz, A., Blanco, Y., Martinez-Heras, E., Solana, E., Bäcker-Koduah, P., Behrens, J., Kuchling, J., Asseyer, S., Scheel, M., Chien, C., Zimmermann, H., Motamedi, S., Kauer-Bonin, J., Brandt, A., Saez-Rodriguez, J., Alexopoulos, L.G., Paul, F., Harbo, H.F., Shams, H., Oksenberg, J., Uccelli, A., Baeza-Yates, R. and Villoslada, P.
Journal of Neurology 271 (3): 1133-1149. March 2024

CAR affinity modulates the sensitivity of CAR-T cells to PD-1/PD-L1-mediated inhibition.
Andreu-Saumell, I., Rodriguez-Garcia, A., Mühlgrabner, V., Gimenez-Alejandre, M., Marzal, B., Castellsagué, J., Brasó-Maristany, F., Calderon, H., Angelats, L., Colell, S., Nuding, M., Soria-Castellano, M., Barbao, P., Prat, A., Urbano-Ispizua, A., Huppa, J.B. and Guedan, S.
Nature Communications 15 (1): 3552. 26 April 2024

New cardiovascular biomarkers in patients with advanced cancer – a prospective study comparing MR-proADM, MR-proANP, copeptin, high-sensitivity troponin T and NT-proBNP.
Anker, M.S., Lück, L.C., Khan, M.S., Porthun, J., Hadzibegovic, S., Lena, A., Wilkenshoff, U., Weinländer, P., Evertz, R., Totzeck, M., Mahabadi, A.A., Rassaf, T., Anker, S.D., Bullinger, L., Keller, U., Karakas, M., Landmesser, U., Butler, J. and von Haehling, S.
European Journal of Heart Failure 26 November 2024 (In Press)

Dynamics of clonal hematopoiesis under DNA-damaging treatment in patients with ovarian cancer.
Arends, C.M., Kopp, K., Hablesreiter, R., Estrada, N., Christen, F., Moll, U.M., Zeillinger, R., Schmitt, W.D., Sehouli, J., Kulbe, H., Fleischmann, M., Ray-Coquard, I., Zeimet, A., Raspagliesi, F., Zamagni, C., Vergote, I., Lorusso, D., Concin, N., Bullinger, L., Braicu, E.I. and Damm, F.
Leukemia 38 (6): 1378-1389. June 2024

High serum prevalence of autoreactive IgG antibodies against peripheral nerve structures in patients with neurological post-COVID-19 vaccination syndrome.
Arlt, F.A., Breuer, A., Trampenau, E., Boesl, F., Kirchner, M., Mertins, P., Sánchez-Sendín, E., Nasouti, M., Mayrhofer, M., Blüthner, M., Endres, M., Prüss, H. and Franke, C.
Frontiers in Immunology 15 : 1404800. 2 August 2024

Serum anti-NMDA receptor antibodies are linked to memory impairment 12 months after stroke.
Arlt, F.A., Sperber, P.S., von Rennenberg, R., Gebert, P., Teegen, B., Georgakis, M.K., Fang, R., Dewenter, A., Görtler, M., Petzold, G.C., Wunderlich, S., Zerr, I., Dichgans, M., Prüss, H. and Endres, M.
Molecular Psychiatry 30 October 2024 (In Press)

Sex ratio and age of onset in AQP4 antibody-associated NMOSD: a review and meta-analysis.
Arnett, S., Chew, S.H., Leitner, U., Hor, J.Y., Paul, F., Yeaman, M.R., Levy, M., Weinshenker, B.G., Banwell, B.L., Fujihara, K., Abboud, H., Dujmovic Basuroski, I., Arrambide, G., Neubrand, V. E., Quan, C., Melamed, E., Palace, J., Sun, J., Asgari, N. and Broadley, S.A
Journal of Neurology 271 (8): 4794-4812. August 2024

Targeted disruption of linkage-specific ubiquitylation reveals a key role of K29-linked ubiquitylation in epigenome integrity.
Arroyo-Gomez, J., Wang, J., Guérillon, C., Isaakova, E., Reverón-Gómez, N., Koutrouli, M., Rahmanto, A.S., Mitrofanov, K., Ingham, A., Schovsbo, S., Weischenfeldt, K., Coscia, F., Typas, D., Völker-Albert, M., Solis, V., Jensen, L.J., Groth, A., Mund, A., Beli, P., Shearer, R.F. and Mailand, N.
bioRxiv : 2024.10.29.620783. 2 November 2024

Regional spinal cord volumes and pain profiles in AQP4-IgG + NMOSD and MOGAD.
Asseyer, S., Zmira, O., Busse, L., Pflantzer, B., Schindler, P., Schmitz-Hübsch, T., Paul, F. and Chien, C.
Frontiers in Neurology 15 : 1308498. 26 January 2024

Reporter-based screening identifies RAS-RAF mutations as drivers of resistance to active-state RAS inhibition in colorectal cancer.
Aust, O., Blanc, E., Lüthen, M., Hollek, V., Astaburuaga-García, R., Klinger, B., Trinks, A., Beule, D., Papke, B., Horst, D., Blüthgen, N., Sers, C., Der, C.J. and Morkel, M.
bioRxiv : 2024.07.01.601542v2. 12 July 2024

Intestinal interstitial fluid isolation provides novel insight into the human host-microbiome interface.
Avery, E.G., Haag, L.M., McParland, V., Kedziora, S.M., Zigra, G.J., Valdes, D.S., Kirchner, M., Popp, O., Geisberger, S., Nonn, O., Karlsen, T.V., N'Diaye, G., Yarritu, A., Bartolomaeus, H., Bartolomaeus, T.U.P., Wimmer, M.I., Haase, N., Wilhelm, A., Grütz, G., Tenstad, O., Wilck, N., Forslund, S.K., Klopfleisch, R., Kühl, A.A., Atreya, R., Kempa, S., Mertins, P., Siegmund, B., Wiig, H. and Müller, D.N.
bioRxiv : 2024.01.11.574524. 11 January 2024

Identification and Mitigation of microbial contaminant reads from long-read metagenomic samples.
Ayala-Montano, S., Afolayan, A.O., Kociurzynski, R., Loeber, U. and Reuter, S.
bioRxiv : 2024.11.26.625374v1. 1 December 2024

ADAM19 cleaves the PTH receptor and associates with brachydactyly type E.
Aydin, A., Klenk, C., Nemec, K., Işbilir, Ali, Martin, L.M., Zauber, H., Rrustemi, T., Toka, H.R., Schuster, H., Gong, M., Stricker, S., Bock, A., Bähring, S., Selbach, M., Lohse, M.J. and Luft, F.C.
Life Science Alliance 7 (4): e202302400. April 2024

A homozygous nonsense mutation identified in COL7A1 in a family with autosomal recessive dystrophic epidermolysis bullosa.
Ayub, M., Xiong, X., Anwer, S., Altmüller, J., Naeem, M., Hassan, N., Khan, K., Motameny, S., Khaliq, S., Rehman, F.U., Uddin, S.A., Wali, A., Betz, R. and Basit, S.
Journal of medicine and life 17 (9): 892-896. 9 September 2024

B

High-sensitivity cardiac troponin I enhances preeclampsia prediction beyond maternal factors and the sFlt-1/PlGF ratio.
Bacmeister, L., Goßling, A., Buellesbach, A., Birukov, A., Myers, J.E., Thomas, S.T., Lee, S., Andersen, M.S., Jorgensen, J.S., Diemert, A., Blois, S.M., Arck, P.C., Hecher, K., Herse, F., Blankenberg, S., Dechend, R., Westermann, D. and Zeller, T.
Circulation 149 (2): 95-106. 9 January 2024

Alternative renin-angiotensin system.
Bader, M., Muscha Steckelings, U., Alenina, N., Santos, R.A.S. and Ferrario, C.M.
Hypertension 81 (5): 964-976. May 2024

Fasting, ketogenic and anti-inflammatory diets stabilized active relapsing-remitting multiple sclerosis over 18 months, a randomized, controlled study.
Bahr, Lina Samira, Bellmann-Strobl, J., Koppold, D.A., Rust, R., Schmitz-Hübsch, T., Olszewska, M., Stadlbauer, J., Bock, M., Scheel, M., Chien, C., Multmeier, J., Krannich, A., Michalsen, A., Paul, F. and Mähler, A.
medRxiv : 2024.08.13.24311863. 14 August 2024

In situ Patch-seq analysis of microglia reveals a lack of stress genes as found in FACS-isolated microglia.
Bakina, O., Conrad, T., Mitic, N., Vidal, R.O., Obrusnik, T., Sai, S., Nolte, C., Semtner, M. and Kettenmann, H.
PLoS ONE 19 (7): e0302376. 11 July 2024

Baseline MRI examination in the NAKO health study - findings on feasibility, participation and dropout rates, comfort, and image quality.
Bamberg, F., Schlett, C.L., Caspers, S., Ringhof, S., Günther, M., Hirsch, J.G., Rüdebusch, J., Miklánková, P., Bittner, N., Jockwitz, C., Forsting, M., Hosten, N., Kaaks, R., Kauczor, H.U., Kroenke, T., Niendorf, T., Peters, A., Pischon, T., Stang, A., Berger, K. and Völzke, H.
Deutsches Arzteblatt International 121 (18): 587-593. 6 September 2024

Leukocyte-associated immunoglobulin-like receptor 1 (LAIR1) is reduced with preeclampsia and small for gestational aged fetuses.
Bartho, L.A., Walker, S.P., Cannon, P., Nguyen, T.V., Nguyen, A., Botha, S.M., Hannan, N.J., Tong, S. and Kaitu'u-Lino, T.J.
Placenta 156 : 10-13. October 2024

Association of peripapillary retinal nerve fiber layer atrophy with cognitive impairment in patients with neuromyelitis optica spectrum disorder.
Barzegar, M., Ashtari, F., Kafieh, R., Karimi, Z., Dehghani, A., Ghalamkari, A., Afshari-Safavi, A. and Paul, F.
Neurological Sciences 29 November 2024 (In Press)

Extraembryonic gut endoderm cells undergo programmed cell death during development.
Batki, J., Hetzel, S., Schifferl, D., Bolondi, A., Walther, M., Wittler, L., Grosswendt, S., Herrmann, B.G. and Meissner, A.
Nature Cell Biology 26 (6): 868-877. June 2024

Novel human neurodevelopmental and neurodegenerative disease associated with IRF2BPL gene variants-mechanisms and therapeutic avenues.
Bauersachs, D., Bomholtz, L., Del Ray Mateos, S., Kühn, R. and Lisowski, P.
Frontiers in Neuroscience 18 : 1426177. 6 June 2024

Activity dependent modulation of glial gap junction coupling in the thalamus.
Baum, P., Beinhauer, A., Zirwes, L., Loenneker, L., Jabs, R., Narayanan, R.T., Oberlaender, M., Seifert, G., Kettenmann, H. and Steinhäuser, C.
iScience 27 (10): 111043. 18 October 2024

Comparing malignant monocytosis across the updated WHO and ICC classifications of 2022.
Baumgartner, F., Baer, C., Bamopoulos, S.A., Ayoub, E., Truger, M., Meggendorfer, M., Lenk, M., Hoermann, G., Hutter, S., Müller, H., Walter, W., Mueller, M.L., Nadarajah, Ni., Blombery, P., Keller, U., Kern, W., Haferlach, C. and Haferlach, T.
Blood 143 (12): 1139-1156. 21 March 2024

Activation of gp130 signaling in T cells drives T(H)17-mediated multi-organ autoimmunity.
Baumgartner, F., Bamopoulos, S.A., Faletti, L., Hsiao, H.J., Holz, M., Gonzalez-Menendez, I., Solé-Boldo, L., Horne, A., Gosavi, S., Özerdem, C., Singh, N., Liebig, S., Ramamoorthy, S., Lehmann, M., Demel, U., Kühl, A.A., Wartewig, T., Ruland, J., Wunderlich, F.T., Schick, M., Walther, W., Rose-John, S., Haas, S., Quintanilla-Martinez, L., Feske, S., Ehl, S., Glauben, R. and Keller, U.
Science Signaling 17 (824): eadc9662. 20 February 2024

Ion mobility-tandem mass spectrometry of mucin-type O-glycans.
Bechtella, L., Chunsheng, J., Fentker, K., Ertürk, G.R., Safferthal, M., Polewski, Ł., Götze, M., Graeber, S.Y., Vos, G.M., Struwe, W.B., Mall, M.A., Mertins, P., Karlsson, N.G. and Pagel, K.
Nature Communications 15 (1): 2611. 23 March 2024

Gut-immune axis and cardiovascular risk in chronic kidney disease.
Behrens, F., Bartolomaeus, H., Wilck, N. and Holle, J.
Clinical Kidney Journal 17 (1): sfad303. January 2024

Passenger gene coamplifications create collateral therapeutic vulnerabilities in cancer.
Bei, Y., Brame, Luca, Kirchner, M., Fritsche-Guenther, R., Kunz, S., Bhattacharya, A., Rusu, M.C., Gürgen, D., Dubois, F.P.B., Köppke, J.K.C., Proba, J., Wittstruck, N., Sidorova, O.A., Chamorro González, R., Dorado Garcia, H., Brückner, L., Xu, R., Giurgiu, M., Rodriguez-Fos, E., Yu, Q., Spanjaard, B., Koche, R.P., Schmitt, C.A., Schulte, J.H., Eggert, A., Haase, K., Kirwan, J., Hagemann, A.I., Mertins, P., Dörr, J.R. and Henssen, A.G.
Cancer Discovery 14 (3): 492-507. 1 March 2024

Undetected neuromuscular disease in patients after heart transplantation.
Bekele, B.M., Gazzerro, E., Schoenrath, F., Falk, V., Rost, S., Hoerning, S., Jelting, Y., Zaum, A.K., Spuler, S. and Knierim, J.
International Journal of Molecular Sciences 25 (14): 7819. 17 July 2024

Virus-reactive T cells expanded in aplastic anemia eliminate hematopoietic progenitor cells by molecular mimicry.
Ben Hamza, A., Welters, C., Stadler, S., Brüggemann, M., Dietze, K., Brauns, O., Brümmendorf, T.H., Winkler, T.H., Bullinger, L., Blankenstein, T., Rosenberger, L., Leisegang, M., Kammertöns, T., Herr, W., Moosmann, A., Strobel, J., Hackstein, H., Dornmair, K., Beier, F. and Hansmann, L.
Blood 143 (14): 1365-1378. 4 April 2024

A vascularized 3D model of the human pancreatic islet for ex vivo study of immune cell-islet interaction.
Bender, R.H.F., O'Donnell, B.T., Shergill, B., Pham, B.Q., Tahmouresie, S., Sanchez, C.N., Juat, D.J., Hatch, M.M.S., Shirure, V.S., Wortham, M., Nguyen-Ngoc, K.V., Jun, Y., Gaetani, R., Christman, K.L., Teyton, L., George, S.C., Sander, M. and Hughes, C.C.W.
Biofabrication 16 (2): 025001. 11 January 2024

B cell and aquaporin-4 antibody relationships with neuromyelitis optica spectrum disorder activity.
Bennett, J.L., Pittock, S.J., Paul, F., Kim, H.J., Irani, S.R., O'Connor, K.C., Patterson, K.R., Smith, M.A., Gunsior, M., Mittereder, N., Rees, W.A., Cimbora, D. and Cree, B.A.C.
Annals of Clinical and Translational Neurology 11 (10): 2792-2798. October 2024

Caveolin-3 and Caveolin-1 interaction decreases channel dysfunction due to Caveolin-3 mutations.
Benzoni, P., Gazzerro, E., Fiorillo, C., Baratto, S., Bartolucci, C., Severi, S., Milanesi, R., Lippi, M., Langione, M., Murano, C., Meoni, C., Popolizio, V., Cospito, A., Baruscotti, M., Bucchi, A. and Barbuti, A.
International Journal of Molecular Sciences 25 (2): 980. 2 January 2024

SoccHealth: a health status examination of former professional football (soccer) players within the German National Cohort.
Berger, K., Baurecht, H., Stein, M., Heise, J.K., Castell, S., Weisser, L., Schikowski, T., Oliver, K., Lieb, W., Micolajczyk, R., Kluttig, A., Schmitt, B., Stang, A., Pischon, T., Peters, A., Brenner, H., Leitzmann, M., Krist, L., Keil, T., Karch, A. and Meyer, T.
BMJ Open Sport & Exercise Medicine 10 (4): e002228. 1 October 2024

The networking brain: how extracellular matrix, cellular networks, and vasculature shape the in vivo mechanical properties of the brain.
Bergs, J., Morr, A.S., Silva, R.V., Infante-Duarte, C. and Sack, I.
Advanced Science 11 (31): e2402338. 21 August 2024

Association of adverse clinical outcomes with peri-infarct ischemia detected by stress cardiac magnetic imaging.
Bernhard, B., Ge, Y., Antiochos, P., Heydari, B., Islam, S., Sanchez Santiuste, N., Steel, K.E., Bingham, S., Mikolich, J.R., Arai, A.E., Bandettini, W.P., Patel, A.R., Shanbhag, S.M., Farzaneh-Far, A., Heitner, J.F., Shenoy, C., Leung, S.W., Gonzalez, J.A., Raman, S.V., Ferrari, V.A., Shah, D.J., Schulz-Menger, J., Stuber, M., Simonetti, O.P. and Kwong, R.Y.
Journal of the American College of Cardiology 84 (5): 417-429. 30 July 2024

Oral microbiota of patients with phenylketonuria: a nation-based cross-sectional study.
Bingöl, M., Cardilli, A., Bingöl, A.C., Löber, U., Bang, C., Franke, A., Bartzela, T., Beblo, S., Mönch, E., Stolz, S., Schaefer, A.S., Forslund, S.K. and Richter, G.M.
Journal of Clinical Periodontology 51 (8): 1081-1092. August 2024

Amplification of autoimmune organ damage by NKp46-activated ILC1.
Biniaris-Georgallis, S.I., Aschman, T., Stergioula, K., Schreiber, F., Jafari, V., Taranko, A., Karmalkar, T., Kasapi, A., Lenac Rovis, T., Jelencic, V., Bejarano, D.A., Fabry, L., Papacharalampous, M., Mattiola, I., Molgora, M., Hou, J., Hublitz, K.W., Heinrich, F., Guerra, G.M., Durek, P., Patone, G., Lindberg, E.L.H., Maatz, H., Hölsken, O., Krönke, G., Mortha, A., Voll, R.E., Clarke, A.J., Hauser, A.E., Colonna, M., Thurley, K., Schlitzer, A., Schneider, C., Stamatiades, E.G., Mashreghi, M.F., Jonjic, S., Hübner, N., Diefenbach, A., Kanda, M. and Triantafyllopoulou, A.
Nature 634 (8035): 952-960. 24 October 2024

Microbiome dynamics and functional composition in Coelopa frigida (Diptera, Coelopidae): insights into trophic specialization of kelp flies.
Bischof, P.S.P., Bartolomaeus, T.U.P., Löber, U. and Bleidorn, C.
Microbial Ecology 87 (1): 91. 3 July 2024

Endothelial overexpression of TGF-β-induced protein impairs venous thrombus resolution.
Bochenek, M.L., Saar, K., Nazari-Jahantigh, M., Gogiraju, R., Wiedenroth, C.B., Münzel, T., Mayer, E., Fink, L., Schober, A., Hübner, N., Guth, S., Konstantinides, S. and Schäfer, K.
JACC: Basic to Translational Science 9 (1): 100-116. January 2024

Metabolic remodelling in atrial fibrillation: manifestations, mechanisms and clinical implications.
Bode, D., Pronto, J.R.D., Schiattarella, G.G. and Voigt, N.
Nature Reviews Cardiology 21 (10): 682-700. October 2024

Rapid UPF1 depletion illuminates the temporal dynamics of the NMD-regulated transcriptome in human cells.
Boehm, V., Wallmeroth, D., Wulf, P.O., Teixeira Alves, L.G., Popp, O., Riedel, M., Wyler, E., Franitza, M., Gerbracht, J.V., Becker, K., Polkovnychenko, K., Del Giudice, S., Benlasfer, N., Mertins, P., Landthaler, M. and Gehring, N.H.
bioRxiv : 2024.03.04.583328. 8 March 2024

Dietary protein and blood pressure: an umbrella review of systematic reviews and evaluation of the evidence.
Boeing, H., Amini, A.M., Haardt, J., Schmidt, A., Bischoff-Ferrari, H.A., Buyken, A.E., Egert, S., Ellinger, S., Kroke, A., Lorkowski, S., Louis, S., Nimptsch, K., Schulze, M.B., Schutkowski, A., Schwingshackl, L., Siener, R., Zittermann, A., Watzl, B. and Stangl, G.I.
European Journal of Nutrition 63 (4): 1041-1058. June 2024

Cerebrospinal fluid findings in patients with neurological manifestations in post-COVID-19 syndrome.
Boesl, F., Goereci, Y., Gerhard, A., Bremer, B., Raeder, V., Schweitzer, F., Hoppmann, U., Behrens, J., Bellmann-Strobl, J., Paul, F., Wildemann, B., Jarius, S., Prüss, H., Audebert, H.J., Warnke, C. and Franke, C.
Journal of Neurology 271 (1): 59-70. January 2024

Bidirectionally responsive thermoreceptors encode cool and warm.
Bokiniec, P., Whitmire, C.J. and Poulet, J.F.A.
biorXiv : 2024.11.28.625856. 28 November 2024

Elevated sortilin expression discriminates functional from non-functional neuroendocrine tumors and enables therapeutic targeting.
Bolduan, F., Wetzel, A., Giesecke, Y., Eichhorn, I., Alenina, N., Bader, M., Willnow, T.E., Wiedenmann, B. and Sigal, M.
Frontiers in Endocrinology 15 : 1331231. 17 April 2024

Transient stabilization of human cardiovascular progenitor cells from human pluripotent stem cells in vitro reflects stage-specific heart development in vivo.
Bolesani, E., Bornhorst, D., Iyer, L.I., Zawada, D., Friese, N., Morgan, M., Lange, L., Gonzalez, D., Schrode, N., Leffler, A., Wunder, J., Franke, A., Drakhlis, L., Sebra, R., Schambach, A., Goedel, A., Dubois, N., Dobreva, G., Moretti, A., Zelarayán, L.C., Abdelilah-Seyfried, S. and Zweigerdt, R.
Cardiovascular Research 120 (11): 1295-1311. July 2024

Adiposity influences on myocardial deformation: a cardiovascular magnetic resonance feature tracking study in people with overweight to obesity without established cardiovascular disease.
Bolz, C., Blaszczyk, E., Mayr, T., Lim, C., Haufe, S., Jordan, J., Barckow, P., Gröschel, J. and Schulz-Menger, J.
International Journal of Cardiovascular Imaging 40 (3): 643-654. March 2024

Daylight exposure and mood in real life: direct association and mediating role of sleep and routine regularity.
Bonatto, F.S., Pilz, L.K., Borges, R.B., Xavier, N.B., Tonon, A.C., do Amaral, F.G. and Hidalgo, M.P.L.
Chronobiology International 41 (8): 1128-1141. 26 July 2024

Polyglutamine disease proteins: Commonalities and differences in interaction profiles and pathological effects.
Bonsor, M., Ammar, O., Schnoegl, S., Wanker, E.E. and Silva Ramos, E.
Proteomics 24 (12-13): e2300114. June 2024

Cognitive reserve and the risk of postoperative neurocognitive disorders in older age.
Borchers, F., Rumpel, M., Laubrock, J., Spies, C., Kozma, P., Slooter, A., van Montfort, S.J.T., Piper, S.K., Wiebach, J., Winterer, G., Pischon, T. and Feinkohl, I.
Frontiers in Aging Neuroscience 15 : 1327388. 5 February 2024

Assessing the efficacy and tolerability of PET-guided BrECADD versus eBEACOPP in advanced-stage, classical Hodgkin lymphoma (HD21): a randomised, multicentre, parallel, open-label, phase 3 trial.
Borchmann, P., Ferdinandus, J., Schneider, G., Moccia, A., Greil, R., Hertzberg, M., Schaub, V., Hüttmann, A., Keil, F., Dierlamm, J., Hänel, M., Novak, U., Meissner, J., Zimmermann, A., Mathas, S., Zijlstra, J.M., Fosså, A., Viardot, A., Hertenstein, B., Martin, S., Giri, P., Scholl, S., Topp, M.S., Jung, W., Vucinic, V., Beck, H.J., Kerkhoff, A., Unger, B., Rank, A., Schroers, R., zum Büschenfelde, C.M., de Wit, M., Trautmann-Grill, K., Kamper, P., Molin, D., Kreissl, S., Kaul, H., von Tresckow, B., Borchmann, S., Behringer, K., Fuchs, M., Rosenwald, A., Klapper, W., Eich, H.T., Baues, C., Zomas, A., Hallek, M., Dietlein, M., Kobe, C. and Diehl, V.
Lancet 404 (10450): 341-352. 27 July 2024

Inheritance of old mitochondria controls early CD8(+) T cell fate commitment and is regulated by autophagy.
Borsa, M., Lechuga-Vieco, A.V., Kayvanjoo, A.H., Yazicioglu, Y., Compeer, E.B., Richter, F.C., Bui, H., Dustin, M.L., Katajisto, P. and Simon, A.K.
bioRxiv : 2024.01.29.577412. 31 January 2024

Autophagy preserves hematopoietic stem cells by restraining MTORC1-mediated cellular anabolism.
Borsa, M., Obba, S., Richter, F.C., Zhang, H., Riffelmacher, T., Carrelha, J., Alsaleh, G., Jacobsen, S.E.W. and Simon, A.K.
Autophagy 20 (1): 45-57. January 2024

Functional autoantibodies against G protein-coupled receptors in hepatic and pulmonary hypertensions in human schistosomiasis.
Botoni, F.A., Lambertucci, J.R., Santos, R.A.S., Müller, J., Talvani, A. and Wallukat, G.
Frontiers in Immunology 15 : 1404384. 17 June 2024

Single-cell time series analysis reveals the dynamics of HSPC response to inflammation.
Bouman, B.J., Demerdash, Y., Sood, S., Grünschläger, F., Pilz, F., Itani, A.R., Kuck, A., Marot-Lassauzaie, V., Haas, S., Haghverdi, L. and Essers, M.A.
Life Science Alliance 7 (3): e202302309. March 2024

Diet and physical activity as risk-reducing factors for hidradenitis suppurativa.
Bouwman, K., Moazzen, S., Kroah-Hartman, M., Dijkstra, G., Horváth, B. and Alizadeh, B.Z.
Journal of the European Academy of Dermatology and Venereology 38 (5): 910-919. May 2024

Mechanical heterogeneity in a soft biomaterial niche controls BMP2 signaling.
Brauer, E., Herrera, A., Fritsche-Guenther, R., Görlitz, S., Leemhuis, H., Knaus, P., Kirwan, J.A., Duda, G.N. and Petersen, A.
Biomaterials 309 : 122614. September 2024

ISG15 blocks cardiac glycolysis and ensures sufficient mitochondrial energy production during Coxsackievirus B3 infection.
Bredow, C., Thery, F., Wirth, E.K., Ochs, S., Kespohl, M., Kleinau, G., Kelm, N., Gimber, N., Schmoranzer, J., Voss, M., Klingel, K., Spranger, J., Renko, K., Ralser, M., Mülleder, M., Heuser, A., Knobeloch, K.P., Scheerer, P., Kirwan, J., Brüning, U., Berndt, N., Impens, F. and Beling, A.
Cardiovascular Research 120 (6): 644-657. 6 April 2024

Analysis of developmental gene expression using smFISH and in silico staging of C. elegans embryos.
Breimann, L., Bahry, E., Zouinkhi, M., Kolyvanov, K., Street, L.A., Preibisch, S. and Ercan, S.
bioRxiv : 2024.05.15.594414. 16 May 2024

Fasting in science and clinics - a report on proceedings from the International Scientific Symposium and Conference on Fasting in Berlin (June 2023).
Breinlinger, C., Meiß, S., Hanslian, E., Jordan, St., Boschmann, M., Rajput Khokhar, A., Michalsen, A. and Koppold, D.A.
Complementary Medicine Research 31 (5): 484-491. October 2024

A TBK1 variant causes autophagolysosomal and motoneuron pathology without neuroinflammation in mice.
Brenner, D., Sieverding, K., Srinidhi, J., Zellner, S., Secker, C., Yilmaz, R., Dyckow, J., Amr, S., Ponomarenko, A., Tunaboylu, E., Douahem, Y., Schlag, J.S., Rodríguez Martínez, L., Kislinger, G., Niemann, C., Nalbach, K., Ruf, W.P., Uhl, J., Hollenbeck, J., Schirmer, L., Catanese, A., Lobsiger, C.S., Danzer, K.M., Yilmazer-Hanke, D., Münch, C., Koch, P., Freischmidt, A., Fetting, M., Behrends, C., Parlato, R. and Weishaupt, J.H.
Journal of Experimental Medicine 221 (5): e20221190. 22 March 2024

Imetelstat-mediated alterations in fatty acid metabolism to induce ferroptosis as a therapeutic strategy for acute myeloid leukemia.
Bruedigam, C., Porter, A.H., Song, A., Vroeg In de Wei, G., Stoll, T., Straube, J., Cooper, L., Cheng, G., Kahl, V.F.S., Sobinoff, A.P., Ling, V.Y., Jebaraj, B.M.C., Janardhanan, Y., Haldar, R., Bray, L.J., Bullinger, L., Heidel, F.H., Kennedy, G.A., Hill, M.M., Pickett, H.A., Abdel-Wahab, O., Hartel, G. and Lane, S.W.
Nature Cancer 5 (1): 47-65. January 2024

The lack of synapsin alters presynaptic plasticity at hippocampal mossy fibers in male mice.
Bruentgens, F., Velasquez, L.M., Stumpf, A., Parthier, D., Breustedt, J., Benfenati, F., Milovanovic, D., Schmitz, D. and Orlando, M.
eNeuro 11 (7): ENEURO.0330-23.2024. July 2024

A type 1 immunity-restricted promoter of the IL-33 receptor gene directs antiviral T-cell responses.
Brunner, T.M., Serve, S., Marx, A.F., Fadejeva, J., Saikali, P., Dzamukova, M., Durán-Hernández, N., Kommer, C., Heinrich, F., Durek, P., Heinz, G.A., Höfer, T., Mashreghi, M.F., Kühn, R., Pinschewer, D.D. and Löhning, M.
Nature Immunology 25 (2): 256-267. February 2024

Making AML fly too close to the sun.
Bullinger, L. and Krönke, J.
Blood 143 (15): 1438-1439. 11 April 2024

Liver-like glycogen metabolism supports glycolysis in naked mole-rat heart during ischaemia.
Bundgaard, A., Wang, N., Vyshkvorkina, I., Jacome Burbano, M.S., Cherevatenko, M., Georgomanolis, T., Dethloff, F., Giavalisco, P., Lackmann, J.W., Lewin, G.R., Frezza, C. and Reznick, J.
bioRxiv : 2024.06.09.598072. 9 June 2024

Copy-number dosage regulates telomere maintenance and disease-associated pathways in neuroblastoma.
Burkert, M., Blanc, E., Thiessen, N., Weber, C., Toedling, J., Monti, R., Dombrowe, V.M., de Biase, M.S., Kaufmann, T.L., Haase, K., Waszak, S.M., Eggert, A., Beule, D., Schulte, J.H., Ohler, U. and Schwarz, R.F.
iScience 27 (10): 110918. 18 October 2024

Optogenetic determination of dynamic and cell-type-specific inhibitory reversal potentials.
Burman, R.J., Diviney, T., Călin, A., Gothard, G., Jouhanneau, J.S., Poulet, J.F.A., Sen, A. and Akerman, C.J.
Journal of Neuroscience 44 (20): e1392232024. 15 May 2024

Mutation-induced LZTR1 polymerization provokes cardiac pathology in recessive Noonan syndrome.
Busley, A.V., Gutiérrez-Gutiérrez, Ó., Hammer, E., Koitka, F., Mirzaiebadizi, A., Steinegger, M., Pape, C., Böhmer, L., Schroeder, H., Kleinsorge, M., Engler, M., Cirstea, I.C., Gremer, L., Willbold, D., Altmüller, J., Marbach, F., Hasenfuss, G., Zimmermann, W.H., Ahmadian, M.R., Wollnik, B. and Cyganek, L.
Cell Reports 43 (7): 114448. 23 July 2024

Epidemiology of myocarditis following COVID-19 or influenza and use of diagnostic assessments.
Butler, O., Raisi-Estabragh, Z., Han, Y., Frenz, A.K., Harz, C., Kelle, S., Schulz-Menger, J., Michel, A. and Kim, J.
Open Heart 11 (2): e002947. 9 November 2024

Structural determinants of mucins in influenza virus inhibition: the synergistic role of sialylated glycans and molecular size.
Butnarasu, C., Safferthal, M., Thomas, J., Povolotsky, T.L., Diehn, R., Fentker, K., Mertins, P., Pagel, K. and Lauster, D.C.
bioRxiv : 2024.12.09.627521v1. 9 December 2024

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Microproteins encoded by noncanonical ORFs are a major source of tumor-specific antigens in a liver cancer patient meta-cohort.
Camarena, M.E., Theunissen, P., Ruiz, M., Ruiz-Orera, J., Calvo-Serra, B., Castelo, R., Castro, C., Sarobe, P., Fortes, P., Perera-Bel, J. and Albà, M.M.
Science Advances 10 (28): eadn3628. July 2024

Establishment of a high-content compatible platform to assess effects of monocyte-derived factors on neural stem cell proliferation and differentiation.
Campo Garcia, J., Bueno, R.J., Salla, M., Martorell-Serra, I., Seeger, B., Akbari, N., Sperber, P., Stachelscheid, H., Infante-Duarte, C., Paul, F. and Starossom, S.C.
Scientific Reports 14 (1): 12167. 28 May 2024

Intramyocardial sprouting tip cells specify coronary arterialization.
Cano, E., Schwarzkopf, J., Kanda, M., Lindberg, E.L., Hollfinger, I., Pogontke, C., Braeuning, C., Fischer, C., Hübner, N. and Gerhardt, H.
Circulation Research 135 (6): 671-684. 30 August 2024

Beyond weight loss: the emerging role of incretin-based treatments in cardiometabolic HFpEF.
Capone, F., Nambiar, N. and Schiattarella, G.G.
Current Opinion in Cardiology 39 (2): 148-153. May 2024

Antigen presentation plays positive roles in the regenerative response to cardiac injury in zebrafish.
Cardeira-da-Silva, J., Wang, Q., Sagvekar, P., Mintcheva, J., Latting, S., Günther, S., Ramadass, R., Yekelchyk, M., Preussner, J., Looso, M., Junker, J.P. and Stainier, D.Y.R.
Nature Communications 15 (1): 3637. 29 April 2024

The real-world applicability of the 2023 international myelin oligodendrocyte glycoprotein antibody-associated disease criteria in a Latin American cohort.
Carnero Contentti, E., Pestchanker, C., Ciampi, E., Castro Suarez, S., Caparo Zamalloa, C., Daccach Marques, V., Messias, K., Gortari, J.I., Tkachuk, V., Silva, B., Mainella, C., Reyes, S., Toro, J., Rodriguez, J., Correa-Diaz, E., Rojas, J.I. and Paul, F.
European Journal of Neurology 31 (12): e16445. December 2024

How to avoid missing a diagnosis of neuromyelitis optica spectrum disorder.
Carnero Contentti, E., Rotstein, D., Okuda, D.T. and Paul, F.
Multiple Sclerosis Journal : 13524585241292797. 5 November 2024 (In Press)

Proteomic signatures improve risk prediction for common and rare diseases.
Carrasco-Zanini, J., Pietzner, M., Davitte, J., Surendran, P., Croteau-Chonka, D.C., Robins, C., Torralbo, A., Tomlinson, C., Grünschläger, F., Fitzpatrick, N., Ytsma, C., Kanno, T., Gade, S., Freitag, D., Ziebell, F., Haas, S., Denaxas, S., Betts, J.C., Wareham, N.J., Hemingway, H., Scott, R.A. and Langenberg, C.
Nature Medicine 30 (9): 2489-2498. September 2024

SRRM2 splicing factor modulates cell fate in early development.
Carvalho, S., Zea-Redondo, L., Tang, T.C.C., Stachel-Braum, P., Miller, D., Caldas, P., Kukalev, A., Diecke, S., Grosswendt, S., Grosso, A.R. and Pombo, A.
Biology Open 13 (4): bio060415. April 2024

Management of busulfan-induced lung injury in pediatric patients with high-risk neuroblastoma.
Castelli, S., Thorwarth, A., van Schewick, C., Wendt, A., Astrahantseff, K., Szymansky, A., Lodrini, M., Veldhoen, S., Gratopp, A., Mall, M.A., Eggert, A. and Deubzer, H.E.
Journal of Clinical Medicine 13 (19): 5995. 8 October 2024

miR-7 controls glutamatergic transmission and neuronal connectivity in a Cdr1as-dependent manner.
Cerda Jara, C.A., Kim, S.J., Thomas, G., Farsi, Z., Zolotarov, G., Dube, G., Deter, A., Bahry, E., Georgii, E., Woehler, A., Piwecka, M. and Rajewsky, N.
EMBO Reports 25 (7): 3039. July 2024

Compound-SNE: comparative alignment of t-SNEs for multiple single-cell omics data visualization.
Cess, C.G. and Haghverdi, L.
Bioinformatics 40 (7): btae471. July 2024

Touch sensation requires the mechanically gated ion channel ELKIN1.
Chakrabarti, S., Klich, J.D., Khallaf, M.A., Hulme, A.J., Sánchez-Carranza, O., Baran, Z.M., Rossi, A., Huang, A.T.L., Pohl, T., Fleischer, R., Fürst, C., Hammes, A., Bégay, V., Hörnberg, H., Finol-Urdaneta, R.K., Poole, K., Dottori, M. and Lewin, G.
Science 383 (6686): 992-998. 1 March 2024

Serotonin transporter-dependent histone serotonylation in placenta contributes to the neurodevelopmental transcriptome.
Chan, J.C., Alenina, N., Cunningham, A.M., Ramakrishnan, A., Shen, Li, Bader, M. and Maze, I.
Journal of Molecular Biology 436 (7): 168454. 1 April 2024

Mechanistic insights into the basis of widespread RNA localization.
Chekulaeva, M.
Nature Cell Biology 26 (7): 1037-1046. July 2024

Baseline microbiome composition impacts resilience to and recovery following antibiotics.
Chen, C.Y., Löber, U., Bartolomaeus, H., Maier, L., Müller, D.N., Wilck, N., Jarquín-Díaz, V.H. and Forslund-Startceva, S.K.
bioRxiv : 2024.03.31.587491. 31 March 2024

Reevaluating the relevance of F-FDG PET findings for diagnosis of neurosarcoidosis: a case series.
Chen, J., Metzger, G., Furth, C., Bohner, G. and Siffrin, V.
Neurological Research and Practice 6 (1): 12. 25 January 2024

Efficient recovery of complete gut viral genomes by combined short- and long-read sequencing.
Chen, J., Sun, C., Dong, Y., Jin, M., Lai, S., Jia, L., Zhao, X., Wang, H., Gao, N.L., Bork, P., Liu, Z., Chen, W.H. and Zhao, X.M.
Advanced Science 11 (13): 2305818. 3 April 2024

LncRNA MIR31HG fosters stemness malignant features of non-small cell lung cancer via H3K4me1- and H3K27Ace-mediated GLI2 expression.
Chen, W., Wang, F., Yu, X., Qi, J., Dong, H., Cui, B., Zhang, Q., Wu, Y., An, J., Ni, N., Liu, C., Han, Y., Zhang, S., Schmitt, C.A., Deng, J., Yu, Y. and Du, J.
Oncogene 43 (18): 1328-1340. 2 May 2024

Myeloid cells coordinately induce glioma cell-intrinsic and cell-extrinsic pathways for chemoresistance via GP130 signaling.
Cheng, J., Li, M., Motta, E., Barci, D., Song, W., Zhou, D., Li, G., Zhu, S., Yang, A., Vaillant, B.D., Imhof, A., Forné, I., Spiegl-Kreinecker, S., Zhang, N., Katayama, H., Bhat, K.P.L., Flüh, C., Kälin, R.E. and Glass, R.
Cell Reports Medicine 5 (8): 101658. 20 August 2024

Multiscale modelling of chromatin 4D organization in SARS-CoV-2 infected cells.
Chiariello, A.M., Abraham, Alex, Bianco, S., Esposito, A., Fontana, A., Vercellone, F., Conte, M. and Nicodemi, M.
Nature Communications 15 (1): 4014. 13 May 2024

Aquaporin-4 immunoglobulin g-seropositive neuromyelitis optica spectrum disorder MRI characteristics: data analysis from the international real-world PAMRINO study cohort.
Chien, C., Cruz E Silva, V., Geiter, E., Meier, D., Zimmermann, H., Bichuetti, D.B., Idagawa, M.I., Altintas, A., Tanriverdi, U., Siritho, S., Pandit, L., Dcunha, A., Sá, M.J., Figueiredo, R., Qian, P., Tongco, C., Lotan, I., Khasminsky, V., Hellmann, M.A., Stiebel-Kalish, H., Rotstein, D.L., Waxman, L., Ontaneda, D., Nakamura, K., Abboud, H., Subei, M.O., Mao-Draayer, Y., Havla, J., Asgari, N., Skejø, P.B., Kister, I., Ringelstein, M., Broadley, S., Arnett, S., Marron, B., Jolley, A.M., Wunderlich, M., Green, S., Cook, L.J., Yeaman, M.R., Smith, T.J., Brandt, A.U., Wuerfel, J. and Paul, F.
Radiology 313 (2): e233099. November 2024

Altered brain perfusion and oxygen levels relate to sleepiness and attention in post-COVID syndrome.
Chien, C., Heine, J., Khalil, A., Schlenker, L., Hartung, T.J., Boesl, F., Schwichtenberg, K., Rust, R., Bellmann-Strobl, J., Franke, C., Paul, F. and Finke, C.
Annals of Clinical and Translational Neurology 11 (8): 2016-2029. August 2024

Genetic analysis of cis-enhancers associated with bone mineral density and periodontitis in the gene SOST.
Chopra, A., Song, J., Weiner 3rd, J., Beule, D. and Schaefer, A.S.
Research Square : rs.3.rs-4409923. 20 June 2024

Protocol for assessing myogenic tone and perfusion pressure in isolated mouse kidneys.
Chu, Z., Kassmann, M., Anistan, Y.M., Luft, F.C., Gollasch, M. and Tsvetkov, D.
STAR Protocols 5 (1): 102845. 15 March 2024

Cancer evolution: a multifaceted affair.
Ciriello, G., Magnani, L., Aitken, S.J., Akkari, L., Behjati, S., Hanahan, D., Landau, D.A., Lopez-Bigas, N., Lupiáñez, D.G., Marine, J.C., Martin-Villalba, A., Natoli, G., Obenauf, A.C., Oricchio, E., Scaffidi, P., Sottoriva, A., Swarbrick, A., Tonon, G., Vanharanta, S. and Zuber, J.
Cancer Discovery 14 : 1-13. January 2024

Rethinking animal attrition in preclinical research: expressing causal mechanisms of selection bias using directed acyclic graphs.
Collazo, A., Kuhn, H.G., Kurth, T., Piccininni, M. and Rohmann, J.L.
Journal of Cerebral Blood Flow and Metabolism : 271678X241275760. 20 August 2024 (In Press)

Logical design of synthetic cis-regulatory DNA for genetic tracing of cell identities and state changes.
Company, C., Schmitt, M.J., Dramaretska, Y., Serresi, M., Kertalli, S., Jiang, B., Yin, J.A., Aguzzi, A., Barozzi, I. and Gargiulo, G.
Nature Communications 15 (1): 897. 5 February 2024

Ultraslow serotonin oscillations in the hippocampus delineate substates across NREM and waking.
Cooper, C., Parthier, D., Sibille, J., Tukker, J.J., Tritsch, N.X. and Schmitz, D.
bioRxiv : 2024.07.09.602643. 13 July 2024

Proposed diagnostic criteria for arrhythmogenic cardiomyopathy. European Task Force consensus report.
Corrado, D., Anastasakis, A., Basso, C., Bauce, B., Blomström-Lundqvist, C., Bucciarelli-Ducci, C., Cipriani, A., De Asmundis, C., Gandjbakhch, E., Jiménez-Jaimez, J., Kharlap, M., McKenna, W.J., Monserrat, L., Moon, J., Pantazis, A., Pelliccia, A., Perazzolo Marra, M., Pillichou, K., Schulz-Menger, J., Jurcut, R., Seferovic, P., Sharma, S., Tfelt-Hansen, J., Thiene, G., Wichter, T., Wilde, A. and Zorzi, A.
International Journal of Cardiology 395 : 131447. 15 January 2024

CD4+ T cell mitochondrial genotype in Multiple Sclerosis: a cross-sectional and longitudinal analysis.
Cortes-Figueiredo, F., Asseyer, S., Chien, C., Zimmermann, H.G., Ruprecht, K., Schmitz-Hübsch, T., Bellmann-Strobl, J., Paul, F. and Morais, V.A.
Scientific Reports 14 (1): 7507. 29 March 2024

Grey matter atrophy and its relationship with white matter lesions in patients with myelin oligodendrocyte glycoprotein antibody-associated disease, aquaporin-4 antibody-positive neuromyelitis optica spectrum disorder, and multiple sclerosis.
Cortese, R., Battaglini, M., Prados, F., Gentile, G., Luchetti, L., Bianchi, A., Haider, L., Jacob, A., Palace, J., Messina, S., Paul, F., Marignier, R., Durand-Dubief, F., de Medeiros Rimkus, C., Apostolos Pereira, S.L., Sato, D.K., Filippi, M., Rocca, M.A., Cacciaguerra, L., Rovira, À., Sastre-Garriga, J., Arrambide, G., Liu, Y., Duan, Y., Gasperini, C., Tortorella, C., Ruggieri, S., Amato, M.P., Ulivelli, M., Groppa, S., Grothe, M., Llufriu, S., Sepulveda, M., Lukas, C., Bellenberg, B., Schneider, R., Sowa, P., Celius, E.G., Pröbstel, A.K., Granziera, C., Yaldizli, Ö., Müller, J., Stankoff, B., Bodini, B., Barkhof, F., Ciccarelli, O. and De Stefano, N.
Annals of Neurology 92 (2): 276-288. 23 May 2024

Safety and efficacy of inebilizumab for the treatment of neuromyelitis optica spectrum disorder: end-of-study results from the open-label period of the N-MOmentum trial.
Cree, B.A.C., Kim, H.J., Weinshenker, B.G., Pittock, S.J., Wingerchuk, D.M., Fujihara, K., Paul, F., Cutter, G.R., Marignier, R., Green, A.J., Aktas, O., Hartung, H.P., She, D., Rees, W., Smith, M., Cimbora, D., Katz, E. and Bennett, J.L.
Lancet Neurology 23 (6): 588-602. June 2024

Next questions in autophagy.
Cuervo, A.M., Elazar, Z., Evans, C., Ge, L., Hansen, M., Jäättelä, M., Liang, J.R.A., Loos, B., Mizushima, N., Simon, A.K., Tooze, S., Yoshimori, T. and Nakamura, S.
Nature Cell Biology 26 (5): 661-666. May 2024

Genetic identification of medullary neurons underlying congenital hypoventilation.
Cui, K., Xia, Y., Patnaik, A., Salivara, A., Lowenstein, E.D., Isik, E.G., Knorz, A.L., Airaghi, L., Crotti, M., Garratt, A.N., Meng, F., Schmitz, D., Studer, M., Rijli, F.M., Nothwang, H.G., Rost, B.R., Strauß, U. and Hernandez-Miranda, L.R.
Science Advances 10 (25): eadj0720. 21 June 2024

Genomic attributes of airway commensal bacteria and mucosa.
Cuthbertson, L., Löber, U., Ish-Horowicz, J.S., McBrien, C.N., Churchward, C., Parker, J.C., Olanipekun, M.T., Burke, C., McGowan, A., Davies, G.A., Lewis, K.E., Hopkin, J.M., Chung, K.F., O'Carroll, O., Faul, J., Creaser-Thomas, J., Andrews, M., Ghosal, R., Piatek, S., Willis-Owen, S.A.G., Bartolomaeus, T.U.P., Birkner, T., Dwyer, S., Kumar, N., Turek, E.M., William Musk, A, Hui, J., Hunter, M., James, A., Dumas, M.E., Filippi, S., Cox, M.J., Lawley, T.D., Forslund, S.K., Moffatt, M.F. and Cookson, W.O.C.
Communications Biology 7 (1): 171. 12 February 2024

D

Covering hierarchical dirichlet mixture models on binary data to enhance genomic stratifications in onco-hematology.
Dall'Olio, D., Sträng, E., Turki, A.T., Tettero, J.M., Barbus, M., Schulze-Rath, R., Elicegui, J.M., Matteuzzi, T., Merlotti, A., Carota, L., Sala, C., Della Porta, M.G., Giampieri, E., Hernández-Rivas, J.M., Bullinger, L. and Castellani, G.
PLoS Computational Biology 20 (2): e1011299. 2 February 2024

A point-of-research decision in synovial tissue engineering: Mesenchymal stromal cells, tissue derived fibroblast or CTGF-mediated mesenchymal-to-fibroblast transition.
Damerau, A., Kirchner, M., Mertins, P., Buttgereit, F. and Gaber, T.
European Journal of Cell Biology 103 (4): 151455. December 2024

Fraternal twins at work: Structures of PLD3/4 reveal mechanism for lysosomal nucleic acid breakdown.
Daumke, O. and Damme, M.
Structure 32 (6): 645-647. 6 June 2024

Systematic benchmarking of single-cell ATAC-sequencing protocols.
De Rop, F.V., Hulselmans, G., Flerin, C., Soler-Vila, P., Rafels, A., Christiaens, V., González-Blas, C.B., Marchese, D., Caratù, G., Poovathingal, S., Rozenblatt-Rosen, O., Slyper, M., Luo, W., Muus, C., Duarte, F., Shrestha, R., Bagdatli, S.T., Corces, M.R., Mamanova, L., Knights, A., Meyer, K.B., Mulqueen, R., Taherinasab, A., Maschmeyer, P., Pezoldt, J., Lambert, C.L.G., Iglesias, M., Najle, S.R., Dossani, Z.Y., Martelotto, L.G., Burkett, Z., Lebofsky, R., Martin-Subero, J.I., Pillai, S., Sebé-Pedrós, A., Deplancke, B., Teichmann, S.A., Ludwig, L.S., Braun, T.P., Adey, A.C., Greenleaf, W.J., Buenrostro, J.D., Regev, A., Aerts, S. and Heyn, H.
Nature Biotechnology 42 (6): 916-926. June 2024

Toward accurate and fast velocity quantification with 3D ultrashort TE phase-contrast imaging.
Degenhardt, K., Schmidt, S., Aigner, C.S., Kratzer, F.J., Seiter, D.P., Mueller, M., Kolbitsch, C., Nagel, A.M., Wieben, O., Schaeffter, T., Schulz-Menger, J. and Schmitter, S.
Magnetic Resonance in Medicine 91 (5): 1994-2009. May 2024

Covalent penicillin-protein conjugates elicit anti-drug antibodies that are clonally and functionally restricted.
Deimel, L.P., Moynié, L., Sun, G., Lewis, V., Turner, A., Buchanan, C.J., Burnap, S.A., Kutuzov, M., Kobras, C.M., Demyaneko, Y., Mohammed, S., Stracy, M., Struwe, W.B., Baldwin, A.J., Naismith, J., Davis, B.G. and Sattentau, Q.J.
Nature Communications 15 (1): 6851. 10 August 2024

An integrated view of the structure and function of the human 4D nucleome.
Dekker, J., Oksuz, B.A., Zhang, Y., Wang, Y., Minsk, M.K., Kuang, S., Yang, L., Gibcus, J.H., Krietenstein, N., Rando, O., Xu, J., Janssens, D.H., Henikoff, S., Kukalev, A., Willemin, A., Winick-Ng, W., Kempfer, R., Pombo, A., Yu, M., Kumar, P., Zhang, L., Belmont, A.S., Sasaki, T., van Schaik, T., Brueckner, L., Peric-Hupkes, D., van Steensel, B., Wang, P., Chai, H., Kim, M., Ruan, Y., Zhang, R., Quinodoz, S.A., Bhat, P., Guttman, M., Zhao, W., Chien, S., Liu, Y., Venev, S.V., Plewczynski, D., Irastorza Azcarate, I., Szabo, D., Thieme, C.J., Szczepinska, T., Chilinski, M., Sengupta, K., Conte, M., Esposito, A., Abraham, A., Zhang, R., Wang, Y., Wen, X., Wu, Q., Yang, Y., Liu, J., Boninsegna, L., Yildirim, A., Zhan, Y., Chiariello, A.M., Bianco, S., Lee, L., Hu, M., Li, Y., Barnett, R.., Cook, A.L., Emerson, D.J., Marchal, C., Zhao, P., Park, P., Alver, B.H., Schroeder, A., Navelkar, R., Bakker, C., Ronchetti, W., Ehmsen, S., Veit, A., Gehlenborg, N., Wang, T., Li, D., Wang, X., Nicodemi, M., Ren, B., Zhong, S., Phillips-Cremins, J.E., Gilbert, D.M., Pollard, K.S., Alber, F., Ma, J., Noble, W.S. and Yue, F.
bioRxiv : 2024.09.17.613111v2. 27 October 2024

Immunosuppression with cyclosporine versus tacrolimus shows distinctive nephrotoxicity profiles within renal compartments.
Demirci, H., Popovic, S., Dittmayer, C., Yilmaz, D.E., El-Shimy, I.A., Mülleder, M., Hinze, C., Su, M., Mertins, P., Kirchner, M., Osmanodja, B., Paliege, A., Budde, K., Amann, K., Persson, P.B., Mutig, K. and Bachmann, S.
Acta Physiologica 240 (8): e14190. August 2024

Third-generation anti-CD19 CAR T cells for relapsed/refractory chronic lymphocytic leukemia: a phase 1/2 study.
Derigs, P., Schubert, M.L., Dreger, P., Schmitt, A., Yousefian, S., Haas, S., Röthemeier, C., Neuber, B., Hückelhoven-Krauss, A., Brüggemann, M., Bernhard, H., Kobbe, G., Lindemann, A., Rummel, M., Michels, B., Korell, F., Ho, A.D., Müller-Tidow, C. and Schmitt, M.
Leukemia 38 (11): 2419-2428. November 2024

Touch receptor end-organ innervation and function require sensory neuron expression of the transcription factor Meis2.
Desiderio, S., Schwaller, F., Tartour, K., Padmanabhan, K., Lewin, G.R., Carroll, P. and Marmigere, F.
eLife 12 : RP89287. 22 February 2024

High-quality peptide evidence for annotating non-canonical open reading frames as human proteins.
Deutsch, Eric W, Kok, Leron W, Mudge, Jonathan M, Ruiz-Orera, J., Fierro-Monti, Ivo, Sun, Zhi, Abelin, Jennifer G, Alba, M Mar, Aspden, Julie L, Bazzini, Ariel A, Bruford, Elspeth, Brunet, Marie A, Calviello, L., Carr, Steven A, Carvunis, Anne-Ruxandra, Chothani, Sonia, Clauwaert, Jim, Dean, Kellie, Faridi, Pouya, Frankish, Adam, Hubner, N., Ingolia, Nicholas, Magrane, Michele, Martin, Maria Jesus, Martinez, Thomas F, Menschaert, Gerben, Ohler, U., Orchard, Sandra, Rackham, Owen, Roucou, Xavier, Slavoff, Sarah A, Valen, Eivind, Wacholder, Aaron C, Weissman, Jonathan S., Wu, Wei, Xie, Zhi, Choudhary, Jyoti, Bassani-Sternberg, Michal, Vizcaino, Juan Antonio, Ternette, Nicola, Moritz, Robert L., Prensner, John and van Heesch, S.
bioRxiv : 2024.09.09.612016. 9 September 2024

Towards standardizing nomenclature in Huntington's disease research.
DiFiglia, M., Leavitt, B.R., Macdonald, D. and Thompson, L.M.
Journal of Huntington's disease 13 (2): 119-131. 2 July 2024

Structural characterization of Thogoto Virus nucleoprotein provides insights into viral RNA encapsidation and RNP assembly.
Dick, A., Mikirtumov, V., Fuchs, J., Krupp, F., Olal, D., Bendl, E., Sprink, T., Diebolder, C., Kudryashev, M., Kochs, G., Roske, Y. and Daumke, O.
Structure 32 (8): 1068-1078. 8 August 2024

Literature review: potential non-thermal molecular effects of external radiofrequency electromagnetic fields on cancer.
Dieper, A., Scheidegger, S., Füchslin, R.M., Veltsista, P.D., Stein, U., Weyland, M., Gerster, D., Beck, M., Bengtsson, O., Zips, D. and Ghadjar, P.
International Journal of Hyperthermia 41 (1): 2379992. 17 July 2024

Adhesion of pancreatic tumor cell clusters by desmosomal molecules enhances early liver metastases formation.
Dietrich, N., Castellanos-Martinez, R., Kemmling, J., Heuser, A., Schnoor, M., Schinner, C. and Spindler, V.
Scientific Reports 14 (1): 18189. 6 August 2024

Comparison of R-CHOP-14 and R-mini-CHOP in older adults with diffuse large B-cell lymphoma - a retrospective multicenter cohort study.
Dilbaz, Z.G., Denker, S., Ankermann, C., Bittenbring, J.T., Kaddu-Mulindwa, D., Kunte, A.S., Hünecke, S., Poeschel, V., Stilgenbauer, S., Thurner, L., Na, I.K., Bewarder, M. and Christofyllakis, K.
European Journal of Haematology 113 (5): 675-684. November 2024

T- and L-type calcium channels maintain calcium oscillations in the murine zona glomerulosa.
Dinh, H.A., Volkert, M., Secener, A.K., Scholl, U.I. and Stölting, G.
Hypertension 81 (4): 811-822. April 2024

Reassessment of marker genes in human induced pluripotent stem cells for enhanced quality control.
Dobner, J., Diecke, S., Krutmann, J., Prigione, A. and Rossi, A.
Nature Communications 15 (1): 8547. 2 October 2024

Simultaneous lung cell and nucleus segmentation from labelled versus unlabelled human lung DIC images.
Dohmen, M., Mittermaier, M., Rumberger, J.L., Yang, L.L., Gruber, A.D., Toennies, M., Hippenstiel, S., Kainmueller, D. and Hocke, A.C.
In: 2024 IEEE International Symposium on Biomedical Imaging (ISBI), 27-30 May 2024, Athens, Greece. 22 August 2024

Pharmacological inhibition of cathepsin S and of NSPs-AAP-1 (a novel, alternative protease driving the activation of neutrophil serine proteases).
Domain, R., Seren, S., Jerke, U., Makridakis, M., Chen, K.J., Zoidakis, J., Rhimi, M., Zhang, X., Bonvent, T., Croix, C., Gonzalez, L., Li, D., Basso, J., Paget, C., Viaud-Massuard, M.C., Lalmanach, G., Shi, G.P., Aghdassi, A., Vlahou, A., McDonald, P.P., Couillin, I., Williams, R., Kettritz, R. and Korkmaz, B.
Biochemical Pharmacology 229 : 116114. November 2024

3D spheroid and organoid models to study neuroinfection of RNA viruses.
Dos Reis, V.P., Cirksena, K., Rybak-Wolf, A., Seeger, B., Herker, E. and Gerold, G.
Methods in Molecular Biology 2824 : 409-424. August 2024

Apoptosis-mediated ADAM10 activation removes a mucin barrier promoting T cell efferocytosis.
Drexhage, L.Z., Zhang, S., Dupont, M., Ragaller, F., Sjule, E., Cabezas-Caballero, J., Deimel, L.P., Robertson, H., Russell, R.A., Dushek, O., Sezgin, E., Karaji, N. and Sattentau, Q.J.
Nature Communications 15 (1): 541. 15 January 2024

Orientation regulation of class-switch recombination in human B cells.
Du, L., Oksenych, V., Wan, H., Ye, X., Dong, J., Ye, A.Y., Abolhassani, H., Vlachiotis, S., Zhang, X., de la Rosa, K., Hammarström, L., van der Burg, M., Alt, F.W. and Pan-Hammarström, Q.
Journal of Immunology 213 (8): 1093-1104. 15 October 2024

A catalog of small proteins from the global microbiome.
Duan, Y., Santos-Júnior, C.D., Schmidt, T.S., Fullam, A., de Almeida, B.L.S., Zhu, C., Kuhn, M., Zhao, X.M., Bork, P. and Coelho, L.P.
Nature Communications 15 (1): 7563. 31 August 2024

Time to disability milestones and annualized relapse rates in NMOSD and MOGAD.
Duchow, A., Bellmann-Strobl, J., Friede, T., Aktas, O., Angstwurm, K., Ayzenberg, I., Berthele, A., Dawin, E., Engels, D., Fischer, K., Flaskamp, M., Giglhuber, K., Grothe, M., Havla, J., Hümmert, M.W., Jarius, S., Kaste, M., Kern, P., Kleiter, I., Klotz, L., Korporal-Kuhnke, M., Kraemer, M., Krumbholz, M., Kümpfel, T., Lohmann, L., Ringelstein, M., Rommer, P., Schindler, P., Schubert, C., Schwake, C., Senel, M., Bergh, F.T., Tkachenko, D., Tumami, H., Trebst, C., Vardakas, I., Walter, A., Warnke, C., Weber, M.S., Wickel, J., Wildemann, B., Winkelmann, A., Paul, F., Stellmann, J.P. and Häußler, V.
Annals of Neurology 95 (4): 720-732. April 2024

Prospects for leveraging the microbiota as medicine for hypertension.
Durgan, D.J., Zubcevic, J., Vijay-Kumar, M., Yang, T., Manandhar, I., Aryal, S., Muralitharan, R.R., Li, H.B., Li, Y., Abais-Battad, J.M., Pluznick, J.L., Muller, D.N., Marques, F.Z. and Joe, B.
Hypertension 81 (5): 951-963. May 2024

Social play behavior is driven by glycine-dependent mechanisms.
Dvorzhak, A., Brecht, M. and Schmitz, D.
Current Biology 34 (16): 3654-3664.e6. 19 August 2024

Metabolic remodeling in cardiac hypertrophy and heart failure with reduced ejection fraction occurs independent of transcription factor EB in mice.
Dörmann, N., Hammer, E., Struckmann, K., Rüdebusch, J., Bartels, K., Wenzel, K., Schulz, J., Gross, S., Schwanz, S., Martin, E., Fielitz, B., Pablo Tortola, C., Hahn, A., Benkner, A., Völker, U., Felix, S.B and Fielitz, J.
Frontiers in Cardiovascular Medicine 10 : 1323760. 8 January 2024

Clinically used broad-spectrum antibiotics compromise inflammatory monocyte-dependent antibacterial defense in the lung.
Dörner, P.J., Anandakumar, H., Röwekamp, I., Fiocca Vernengo, F., Millet Pascual-Leone, B., Krzanowski, M., Sellmaier, J., Brüning, U., Fritsche-Guenther, R., Pfannkuch, L., Kurth, F., Milek, M., Igbokwe, V., Löber, U., Gutbier, B., Holstein, M., Heinz, G.A., Mashreghi, M.F., Schulte, L.N., Klatt, A.B., Caesar, S., Wienhold, S.M., Offermanns, S., Mack, M., Witzenrath, M., Jordan, S., Beule, D., Kirwan, J.A., Forslund, S.K., Wilck, N., Bartolomaeus, H., Heimesaat, M.M. and Opitz, B.
Nature Communications 15 (1): 2788. 30 March 2024

Effective symptom relief through continuous integration of palliative care in advanced renal cell carcinoma patients: comprehensive measurement using the palliative care base assessment.
Dörr, A., Vogel, I., Wittenbecher, F., Westermann, J., Thuss-Patience, P., Ahn, J., Pelzer, U., Hardt, J., Bullinger, L. and Flörcken, A.
Palliative Care and Social Practice 18 : 26323524241260424. 24 June 2024

Thrombus or tumor? A case report of a rare sarcoma entity: intimal sarcoma of the pulmonary arteries.
Dörr, A., Flörcken, A, Bullinger, L., Capper, D., Von Deimling, A., Kaul, D., Märdian, S., Starck, C., Horst, D., Dragomir, M.P., Schäfer, F.M. and Jarosch, A.
Molecular Biology Reports 51 : 568. 24 April 2024

Effects of a short-term vegan challenge in older adults on metabolic and inflammatory parameters - a randomized controlled crossover study.
Döschner, L., Schulze, K., Göger, L., Bosy-Westphal, A., Krüger, N., Franz, K., Müller-Werdan, U., Herpich, C. and Norman, K.
Molecular Nutrition & Food Research 68 (4): e2300623. February 2024

Detection of Bombali virus in a Mops condylurus bat in Kyela, Tanzania.
Düx, A., Lwitiho, S.E., Ayouba, A., Röthemeier, C., Merkel, K., Weiss, S., Thaurignac, G., Lander, A., Kouadio, L., Nowak, K., Corman, V., Drosten, C., Couacy-Hymann, E., Krüger, D.H., Kurth, A., Calvignac-Spencer, S., Peeters, M., Ntinginya, N.E., Leendertz, F.H. and Mangu, C.
Viruses 16 (8): 1227. August 2024

Smoking-associated gene expression alterations in nasal epithelium reveal immune impairment linked to lung cancer risk.
de Biase, M.S., Massip, F., Wei, T.T., Giorgi, F.M., Stark, R., Stone, A., Gladwell, A., O'Reilly, M., Schütte, D., de Santiago, I., Meyer, K.B., Markowetz, F., Ponder, B.A.J., Rintoul, R.C. and Schwarz, R.F.
Genome Medicine 16 (1): 54. 8 April 2024

Transcriptomic mapping of the 5-HT receptor landscape.
de Filippo, R. and Schmitz, D.
Patterns 5 (10): 101048. 11 October 2024

Synthetic surprise as the foundation of the psychedelic experience.
de Filippo, R. and Schmitz, D.
Neuroscience and Biobehavioral Reviews 157 : 105538. February 2024

Routine regularity during a global pandemic: impact on mental health outcomes and influence of chronotype.
de Sá Couto-Pereira, N., Nexha, A., Boff Borges, R., Amando, G.R., Francisco, A.P., Amaral, F.G., Frey, B.N., Calcagnotto, M.E., Hidalgo, M.P. and Pilz, L.K.
Chronobiology International 41 (3): 456-472. 2024

New coronavirus vaccine and method for designing and obtaining a virus vaccine.
Max Delbrueck Centrum fuer Molekulare in der Helmholtz Gemeinschaft.
EP-4396198-A2. 10 July 2024

LONG-read sequencing of human immunoglobulin gene introns to define a biomarker for in vivo DNA break repair.
Max Delbrueck Centrum fuer Molekulare in der Helmholtz Gemeinschaft.
WO-2024194255-A1. 26 September 2024

Perinatal brain group 3 innate lymphoid cells are involved in the formation of murine dural lymphatics.
del Rio Serrato, A., Latorre Hernández, B., Bartl, E., Stehle, C., Hölsken, O., Diefenbach, A., Romagnani, C. and Infante-Duarte, C.
bioRxiv : 2024.06.12.597323. 14 June 2024

E

Human ADA2 deficiency is characterized by the absence of an intracellular hypoglycosylated form of adenosine deaminase 2.
Ehlers, L., Hombrouck, A., Wouters, M., Pillay, B., Delafontaine, S., Bucciol, G., Baggio, M., Dzhus, M., Ebstein, F., Jacquemyn, M., De Somer, L., Schrijvers, R., Vanderschueren, S., Cassiman, D., Kirchner, M., Mertins, P., Mashreghi, M.F., Kallinich, T., Daelemans, D., Agostinis, P., Moens, L. and Meyts, I.
bioRxiv : 2023.10.25.564037v3. 8 October 2024

CAR-mediated targeting of NK cells overcomes tumor immune escape caused by ICAM-1 downregulation.
Eitler, J., Rackwitz, W., Wotschel, N., Gudipati, V., Murali Shankar, N., Sidorenkova, A., Huppa, J.B., Ortiz-Montero, P., Opitz, C., Künzel, S.R., Michen, S., Temme, A., Loureiro, L.R., Feldmann, A., Bachmann, M., Boissel, L., Klingemann, H., Wels, W.S. and Tonn, T.
Journal for ImmunoTherapy of Cancer 12 (2): e008155. 27 February 2024

Targeted perturb-seq reveals EGR1 and FOS as key regulators of the transcriptional RAF-MAPK response.
El Kassem, G., Sieber, A., Klinger, B., Uhlitz, F., Steinbrecht, D., van Bentum, M., Hillmer, J., von Schlichting, J., Schäfer, R., Blüthgen, N. and Boettcher, M.
bioRxiv : 2024.01.13.575500. 15 January 2024

Protein intake and body weight, fat mass and waist circumference: an umbrella review of systematic reviews for the evidence-based guideline on protein intake of the German Nutrition Society.
Ellinger, S., Amini, A.M., Haardt, J., Lehmann, A., Schmidt, A., Bischoff-Ferrari, H.A., Buyken, A.E., Kroke, A., Kühn, T., Louis, S., Lorkowski, S., Nimptsch, K., Schulze, M.B., Schwingshackl, L., Siener, R., Stangl, G.I., Volkert, D., Zittermann, A., Watzl, B. and Egert, S.
European Journal of Nutrition 63 (1): 3-32. February 2024

Insulin secretion defect in children and adolescents with obesity: clinical and molecular genetic characterization.
Enders-Seidlitz, H., Raile, K., Gong, M., Galler, A., Kuehnen, P. and Wiegand, S.
Journal of Diabetes Research 2024 : 5558634. 20 March 2024

MACC1 regulates LGR5 to promote cancer stem cell properties in colorectal cancer.
Erdem, M., Lee, K.H., Hardt, M., Regan, J.L., Kobelt, D., Walther, W., Mokrizkij, M., Regenbrecht, C. and Stein, U.
Cancers 16 (3): 604. 31 January 2024

The evolving landscape of cardiometabolic diseases.
Eroglu, T., Capone, F. and Schiattarella, G.G.
EBioMedicine 109 : 105447. November 2024

Intermuscular adipose tissue accumulation is associated with higher tissue sodium in healthy individuals.
Ertuglu, L.A., Sahinoz, M., Alsouqi, A., Deger, S.M., Guide, A., Pike, M., Robinson-Cohen, C., Akwo, E., Pridmore, M., Crescenzi, R., Madhur, M.S., Kirabo, A., Harrison, D.G., Luft, F.C., Titze, J., Ikizler, T.A. and Gamboa, J.L.
Physiological Reports 12 (13): e16127. July 2024

Gene-edited primary muscle stem cells rescue dysferlin-deficient muscular dystrophy.
Escobar Fernandez, H., Di Francescantonio, S., Marg, A., Zhogov, A., Krishna, S., Metzler, E., Petkova, M., Daumke, O., Kühn, R. and Spuler, S.
bioRxiv : 2024.02.12.579813. 12 February 2024

Gut microbiota dysbiosis is associated with altered tryptophan metabolism and dysregulated inflammatory response in COVID-19.
Essex, M., Millet Pascual-Leone, B.L., Löber, U., Kuhring, M., Zhang, B., Brüning, U., Fritsche-Guenther, R., Krzanowski, M., Fiocca Vernengo, F., Brumhard, S., Röwekamp, I., Bielecka, A.A., Lesker, T.R., Wyler, E., Landthaler, M., Mantei, A., Meisel, C., Caesar, S., Thibeault, C., Corman, V.M., Marko, L., Suttorp, N., Strowig, T., Kurth, F., Sander, L.E., Li, Y., Kirwan, J.A., Forslund, S.K. and Opitz, B.
NPJ Biofilms and Microbiomes 10 (1): 66. 1 August 2024

Shared and distinct gut microbiota in spondyloarthritis, acute anterior uveitis, and Crohn's disease.
Essex, M., Rios Rodriguez, V., Rademacher, J., Proft, F., Löber, U., Marko, L., Pleyer, U., Strowig, T., Marchand, J., Kirwan, J.A., Siegmund, B., Forslund, S.K. and Poddubnyy, D.
Arthritis & Rheumatology 76 (1): 48-58. January 2024

Relapse-independent disease activity in neuromyelitis optica spectrum disorder: a systematic review.
Etemadifar, M., Alaei, S.A., Akaishi, T., Salari, M., Norouzi, M., Samadzadeh, S. and Paul, F.
Multiple Sclerosis and Related Disorders 90 : 105843. October 2024

Touch inhibits cold: non-contact cooling reveals a novel thermotactile gating mechanism.
Ezquerra-Romano, I., Chowdhury, M. and Haggard, P.
bioRxiv : 2024.08.06.606653. 8 August 2024

F

The diversity of the microbiome impacts chronic lymphocytic leukemia development in mice and humans.
Faitova, T., Coelho, M., Da Cunha-Bang, C., Ozturk, S., Kartal, E., Bork, P., Seiffert, M. and Niemann, C.U.
Haematologica 109 (10): 3237-3250. October 2024

In vivo sequential mutagenesis in germinal center B cells using a dual-recombinase approach: FOXO1 re-expression upon FOXO1 knockout rescues class switch recombination.
Farré Díaz, C., Kabrani, E., Winkler, W., Salomon, C., Wunderlich, F.T., Janz, M. and Rajewsky, K.
bioRxiv : 2024.05.17.592915. 22 May 2024

The C-terminus of the prototypical M2 muscarinic receptor localizes to the mitochondria and regulates cell respiration under stress conditions.
Fasciani, I., Petragnano, F., Wang, Z., Edwards, R., Telugu, N., Pietrantoni, I., Zabel, U., Zauber, H., Grieben, M., Terzenidou, M.E., Di Gregorio, J., Pellegrini, C., Santini, S., Taddei, A.R., Pohl, B., Aringhieri, S., Carli, M., Aloisi, G., Marampon, F., Charlesworth, E., Roman, A., Diecke, S., Flati, V., Giorgi, F., Amicarelli, F., Tobin, A.B., Scarselli, M., Tokatlidis, K., Rossi, M., Lohse, M.J., Annibale, P. and Maggio, R.
PLoS Biology 22 (4): e3002582. 29 April 2024

Microenvironmental acidification by pneumococcal sugar consumption fosters barrier disruption and immune suppression in the human alveolus.
Fatykhova, D., Fritsch, V.N., Siebert, K., Methling, K., Lalk, M., Busche, T., Kalinowski, J., Weiner, J., Beule, D., Bertrams, W., Kohler, T.P., Hammerschmidt, S., Löwa, A., Fischer, M., Mieth, M., Hellwig, K., Frey, D., Neudecker, J., Rueckert, J.C., Toennies, M., Bauer, T.T., Graff, M., Tran, H.L., Eggeling, S., Gruber, A.D., Antelmann, H., Hippenstiel, S. and Hocke, A.C.
European Respiratory Journal 64 (6): 2301983. December 2024

Determinants of ascending aortic morphology: Cross-sectional deep learning-based analysis on 25,073 non-contrast-enhanced MRI of NAKO.
Fay, L., Hepp, T., Winkelmann, M.T., Peters, A., Heier, M., Niendorf, T., Pischon, T., Endemann, B., Schulz-Menger, J., Krist, L., Schulze, M.B., Mikolajczyk, R., Wienke, A., Obi, N., Silenou, B.C., Lange, B., Kauczor, H.U., Lieb, W., Baurecht, H., Leitzmann, M., Trares, K., Brenner, H., Michels, K.B., Jaskulski, St., Völzke, H., Nikolaou, K., Schlett, C.L., Bamberg, F., Lescan, M., Yang, B., Küstner, T. and Gatidis, S.
medRxiv : 2024.07.12.24310356. 15 July 2024

Wie weiblich ist die Onkologie in Deutschland? [How feminine is oncology in Germany?].
Fehm, T., Behrens, B., Friebe, V., Krawczyk, N., Bleckmann, A., Höpken, U., Wardelmann, E., Heinrich, K., Duda, A., Gögel, S., Wesselmann, S., Nothacker, M., Schmalfeldt, B. and Hasenburg, A.
Forum 39 : 212–216. June 2024

The association of plasma leptin, soluble leptin receptor and total and high-molecular weight adiponectin with the risk of perioperative neurocognitive disorders.
Feinkohl, I., Janke, J., Slooter, A.J.C., Winterer, G., Spies, C. and Pischon, T.
American Journal of Geriatric Psychiatry 32 (9): 1119-1129. September 2024

IGF1R is protective in pneumococcal pneumonia.
Felten, M., Teixeira Alves, L.G., Letsiou, E., Arnedo, E.A., Piñeiro-Hermida, S., López, I.P., Dietert, K., Firsching, T., Gruber, A.D., Fatykhova, D., Hocke, A., Lingscheid, T., Lienau, J., Rohde, G., Pichel, J.G. and Witzenrath, M.
bioRxiv : 2024.09.11.612370. 11 September 2024

Cardiovascular magnetic resonance reveals myocardial involvement in patients with active stage of inflammatory bowel disease.
Fenski, M., Abazi, E., Gröschel, J., Hadler, T., Kappelmayer, D., Kolligs, F., Prieto, C., Botnar, R., Kunze, K.P. and Schulz-Menger, J.
Clinical Research in Cardiology 5 August 2024 (In Press)

Systemic effects of cystic fibrosis transmembrane conductance regulator (CFTR) modulators on the blood proteome.
Fentker, K., Kirchner, M., Ziehm, M., Niquet, S., Popp, O., Duerr, J., Schaupp, L., Roehmel, J., Thee, S., Haemmerling, S., Sommerburg, O., Stahl, M., Graeber, S.Y., Mall, M.A. and Mertins, P.
bioRxiv : 2024.10.18.619058. 18 October 2024

Impact of individualized treatment on recovery from fatigue and return to work in survivors of advanced stage Hodgkin Lymphoma: results from the randomized international GHSG HD18 trial.
Ferdinandus, J., Müller, H., Damaschin, C., Jacob, A.S., Meissner, J., Krasniqi, F., Mey, U., Schöndube, D., Thiemer, J., Mathas, S., Zijlstra, J., Greil, R., Feuring-Buske, M., Markova, J., Rüffer, J.U., Kobe, C., Eich, H.T., Baues, C., Fuchs, M., Borchmann, P. and Behringer, K.
Annals of Oncology 35 (3): 276-284. March 2024

Role of kinin receptors in skin pigmentation.
Ferreira, J.C.P., Soley, B.S., Pawloski, P.L., Moreira, C.G., Pesquero, J.B., Bader, M., Calixto, J.B., Cabrini, D.A. and Otuki, M.F.
European Journal of Pharmacology 973 : 176537. 15 June 2024

Structural disconnectivity in postoperative delirium: A perioperative two-center cohort study in older patients.
Fislage, M., Winzeck, S., Woodrow, R., Lammers-Lietz, F., Stamatakis, E.A., Correia, M.M., Preller, J., Feinkohl, I., Hendrikse, J., Pischon, T., Spies, C.D., Slooter, A.J.C., Winterer, G., Menon, D.K. and Zacharias, N.
Alzheimer's and Dementia 20 (4): 2861-2872. April 2024

Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Flügel, T., Schacherl, M., Unbehaun, A., Schroeer, B., Dabrowski, M., Bürger, J., Mielke, T., Sprink, T., Diebolder, C.A., Guillén Schlippe, Y.V. and Spahn, C.M.T.
Nature Communications 15 (1): 1756. 26 February 2024

Ide copy number variant does not influence lesion size and mortality in two C57BL/6J mouse models of cerebrovascular ischemia nor in human cerebrovascular disease. An exploratory study.
Foddis, M., Blumenau, S., Mueller, S., Messerschmidt, C., Rocca, C., Pagnamenta, A.T., Winek, K., Endres, M., Meisel, A., Tucci, A., Bras, J., Guerreiro, R., Beule, D., Dirnagl, U. and Sassi, C.
bioRxiv : 2024.05.15.593342. 16 May 2024

L-glyceraldehyde inhibits neuroblastoma cell growth via a multi-modal mechanism on metabolism and Signaling.
Forbes, M., Kempa, R., Mastrobuoni, G., Rayman, L., Pietzke, M., Bayram, S., Arlt, B., Spruessel, A., Deubzer, H.E. and Kempa, S.
Cancers 16 (9): 1664. May 2024

Mitophagy modulation for the treatment of cardiovascular diseases.
Forte, M., D'Ambrosio, L., Schiattarella, G.G., Salerno, N., Perrone, M.A., Loffredo, F.S., Bertero, E., Pilichou, K., Manno, G., Valenti, V., Spadafora, L., Bernardi, M., Simeone, B., Sarto, G., Frati, G., Perrino, C. and Sciarretta, S.
European Journal of Clinical Investigation 54 (8): e14199. August 2024

Treatment switches of disease-modifying therapies in people with multiple sclerosis: long-term experience from the German MS Registry.
Frahm, N., Ellenberger, D., Stahmann, A., Fneish, F., Lüftenegger, D., Salmen, H.C., Schirduan, K., Schaak, T.P.A., Flachenecker, P., Kleinschnitz, C., Paul, F., Krefting, D., Zettl, U.K., Peters, M. and Warnke, C.
Therapeutic Advances in Neurological Disorders 17 : 17562864241239740. 2024

Effects of bradykinin B2 receptor ablation from tyrosine hydroxylase cells on behavioral and motor aspects in male and female mice.
Franco, T.M., Tavares, M.R., Novaes, L.S., Munhoz, C.D., Peixoto-Santos, J.E., Araujo, R.C., Donato, J., Bader, M. and Wasinski, F.
International Journal of Molecular Sciences 25 (3): 1490. 25 January 2024

Arctique: an artificial histopathological dataset unifying realism and controllability for uncertainty quantification.
Franzen, J., Winklmayr, C., Guarino, V.E., Karg, C., Yu, X., Koreuber, N., Albrecht, J.P., Bischoff, P. and Kainmueller, D.
arXiv : 2411.0709. 11 November 2024

Neural network-assisted humanisation of COVID-19 hamster transcriptomic data reveals matching severity states in human disease.
Friedrich, V.D., Pennitz, P., Wyler, E., Adler, J.M., Postmus, D., Müller, K., Teixeira Alves, L.G., Prigann, J., Pott, F., Vladimirova, D., Hoefler, T., Goekeri, C., Landthaler, M., Goffinet, C., Saliba, A.E., Scholz, M., Witzenrath, M., Trimpert, J., Kirsten, H. and Nouailles, G.
EBioMedicine 108 : 105312. October 2024

Interferon regulatory factor 4 plays a pivotal role in the development of aGVHD-associated colitis.
Frueh, J.T., Campe, J., Sunaga-Franze, D.Y., Verheyden, N.A., Ghimire, S., Meedt, E., Haslinger, D., Harenkamp, S., Staudenraus, D., Sauer, S., Kreft, A., Schubert, R., Lohoff, M., Krueger, A., Bonig, H., Chiocchetti, A.G., Zeiser, R., Holler, E. and Ullrich, E.
OncoImmunology 13 (1): 2296712. 2024

Association of an impaired GH‑IGF‑I axis with cardiac wasting in patients with advanced cancer.
Fröhlich, A.K., Porthun, J., Talha, K.M., Lena, A., Hadzibegovic, S., Wilkenshoff, U., Sonntag, F., Nikolski, A., Ramer, L.V., Zeller, T., Keller, U., Bullinger, L., Anker, S.D., Haverkamp, W., von Haehling, S., Doehner, W., Rauch, U., Skurk, C., Cleland, J.G.F., Butler, J., Coats, A.J.S., Landmesser, U., Karakas, M. and Anker, M.S.
Clinical Research in Cardiology 8 April 2024 (In Press)

Follow-up of the GHSG HD16 trial of PET-guided treatment in early-stage favorable Hodgkin lymphoma.
Fuchs, M., Jacob, A.S., Kaul, H., Kobe, C., Kuhnert, G., Pabst, T., Greil, R., Bröckelmann, P.J., Topp, M.S., Just, M., Hertenstein, B., Soekler, M., Vogelhuber, M., Zijlstra, J.M., Keller, U.B., Krause, S.W., Dührsen, U., Meissner, J., Viardot, A., Eich, H.T., Baues, C., Diehl, V., Rosenwald, A., Buehnen, I., von Tresckow, B., Dietlein, M., Borchmann, P., Engert, A. and Eichenauer, D.A.
Leukemia 38 (1): 160-167. January 2024

G

Evaluating large language model workflows in clinical decision support: referral, triage, and diagnosis.
Gaber, F., Shaik, M., Franke, V. and Akalin, A.
medRxiv : 2024.09.27.24314505. 28 September 2024

Protocol to characterize immune cell subpopulations in cerebrospinal fluid of patients with neuroinflammatory diseases using mass cytometry.
Gallaccio, G., Wang, M., Schlickeiser, S., Kunkel, D., Böttcher, C. and Fernández-Zapata, C.
STAR Protocols 5 (2): 103038. 27 April 2024

Cell-mediated exon skipping normalizes dystrophin expression and muscle function in a new mouse model of Duchenne Muscular Dystrophy.
Galli, F., Bragg, L., Rossi, M., Proietti, D., Perani, L., Bacigaluppi, M., Tonlorenzi, R., Sibanda, T., Caffarini, M., Talapatra, A., Santoleri, S., Meregalli, M., Bano-Otalora, B., Bigot, A., Bozzoni, I., Bonini, C., Mouly, V., Torrente, Y. and Cossu, G.
EMBO Molecular Medicine 16 (4): 927-944. 15 April 2024

Activation mapping in multi-center rat sensory-evoked functional MRI datasets using a unified pipeline.
Galteau, M.E., Broadwater, M., Chen, Y., Desrosiers-Gregoire, G., Gil, R., Kaesser, J., Kim, E., Kiryagdi, P., Lambers, H., Liu, Y.Y., Lopez-Gil, X., MacNicol, E., Mohebkhodaei, P., De Oliveira, R.X.N., Pereira, C.A., Reimann, H.M., Rivera-Olvera, Al., Selingue, E., Sirmpilatze, N., Strobelt, S., Sumiyoshi, A., Tham, C., Tudela, R., Vrooman, R.M., Wank, I., Zhang, Y., van Engelenburg, W.A., Baudewig, J., Boretius, S., Cash, D., Chakravarty, M.M., Chuang, K.H., Ciobanu, L., Devenyi, G.A., Faber, C., Hess, A., Homberg, J.R., Jelescu, I.O., Justicia, C., Kawashima, R., Niendorf, T., Scheenen, T.W.J., Shemesh, N., Soria, G., Todd, N., Wachsmuth, L., Yu, X., Zhang, B.B., Shih, Y.Y.I., Lee, S.H. and Grandjean, J.
bioRxiv : 2024.09.27.615384. 30 September 2024

YAP/TAZ signaling in allantois-derived cells is required for placental vascularization.
Gao, S., Thillaikumaran, T., Dominguez, M.H., Giang, W., Hayes, K., Chen, X., Pace, J., Bockman, J., Jathan, D., Sung, D., Narayan, S., Frankfurter, M., Mericko-Ishizuka, P., Yang, J., Castro, M., Potente, M. and Kahn, M.L.
bioRxiv : 2024.09.15.613151. 16 September 2024

iSuRe-HadCre is an essential tool for effective conditional genetics.
Garcia-Gonzalez, I., Rocha, S.F., Hamidi, A., Garcia-Ortega, L., Regano, A., Sanchez-Muñoz, M.S., Lytvyn, M., Garcia-Cabero, A., Roig-Soucase, S., Schoofs, H., Castro, M., Sabata, H., Potente, M., Graupera, M., Makinen, T. and Benedito, R.
Nucleic Acids Research 52 (13): e56. 22 July 2024

Emergence of community behaviors in the gut microbiota upon drug treatment.
Garcia-Santamarina, S., Kuhn, M., Devendran, S., Maier, L., Driessen, M., Mateus, A., Mastrorilli, E., Brochado, A.R., Savitski, M.M., Patil, K.R., Zimmermann, M., Bork, P. and Typas, A.
Cell 187 (22): 6346-6357.e20. 31 October 2024

Cell states in cancer: drivers, passengers, and trailers.
Gargiulo, G., Serresi, M. and Marine, J.C.
Cancer Discovery 14 (4): 610-614. 4 April 2024

The NSP3 protein of SARS-CoV-2 binds fragile X mental retardation proteins to disrupt UBAP2L interactions.
Garvanska, D.H., Alvarado, R.E., Mundt, F.O., Lindqvist, R., Duel, J.K., Coscia, F., Nilsson, E., Lokugamage, K., Johnson, B.A., Plante, J.A., Morris, D.R., Vu, M.N., Estes, L.K., McLeland, A.M., Walker, J., Crocquet-Valdes, P.A., Mendez, B.L., Plante, K.S., Walker, D.H., Weisser, M.B., Överby, A.K., Mann, M., Menachery, V.D. and Nilsson, J.
EMBO Reports 25 (2): 902-926. 13 February 2024

Serum proteomics distinguish subtypes of NMO spectrum disorder and MOG antibody-associated disease and highlight effects of B-cell depletion.
Gawde, S., Siebert, N., Ruprecht, K., Kumar, G., Ko, R.M., Massey, K., Guthridge, J.M., Mao-Draayer, Y., Schindler, P., Hastermann, M., Pardo, G., Paul, F. and Axtell, R.C.
Neurology Neuroimmunology & Neuroinflammation 11 (4): e200268. July 2024

Stress CMR Perfusion Imaging in the Medicare-Eligible Population: Insights From the SPINS Study.
Ge, Y., Antiochos, P., Bernhard, B., Heydari, B., Steel, K., Bingham, S., Mikolich, J.R., Arai, A.E., Bandettini, W.P., Patel, A.R., Shanbhag, S.M., Farzaneh-Far, A., Heitner, J.F., Shenoy, C., Leung, S.W., Gonzalez, J.A., Shah, D.J., Raman, S.V., Ferrari, V.A., Schulz-Menger, J., Stuber, M., Simonetti, O.P. and Kwong, R.Y.
JACC: Cardiovascular Imaging 16 October 2024 (In Press)

BTK inhibition limits microglia‑perpetuated CNS inflammation and promotes myelin repair.
Geladaris, A., Torke, S., Saberi, D., Alankus, Y.B., Streit, F., Zechel, S., Stadelmann-Nessler, C., Fischer, A., Boschert, U., Häusler, D. and Weber, M.S.
Acta Neuropathologica 147 (1): 75. 24 April 2024

Modeling disease progression in spinocerebellar ataxias.
Georgii, E., Klockgether, T., Jacobi, H., Schmitz-Hubsch, T., Ashizawa, T., Kuo, S.H., Elter, T., Piraud, M. and Faber, J.
medRxiv : 2024.05.29.24308162. 31 May 2024

The influence of MOGAD on diagnosis of multiple sclerosis using MRI.
Geraldes, R., Arrambide, G., Banwell, B., Rovira, À., Cortese, R., Lassmann, H., Messina, S., Rocca, M.A., Waters, P., Chard, D., Gasperini, C., Hacohen, Y., Mariano, R., Paul, F., DeLuca, G.C., Enzinger, C., Kappos, L., Leite, M.I., Sastre-Garriga, J., Yousry, T., Ciccarelli, O., Filippi, M., Barkhof, F. and Palace, J.
Nature Reviews Neurology 20 (10): 620-635. October 2024

Epstein-Barr virus-driven B cell lymphoma mediated by a direct LMP1-TRAF6 complex.
Giehler, F., Ostertag, M.S., Sommermann, T., Weidl, D., Sterz, K.R., Kutz, H., Moosmann, A., Feller, S.M., Geerlof, A., Biesinger, B., Popowicz, G.M., Kirchmair, J. and Kieser, A.
Nature Communications 15 (1): 414. 10 January 2024

Polarity-JaM: An image analysis toolbox for cell polarity, junction and morphology quantification.
Giese, W., Albrecht, J.P., Oppenheim, O., Akmeriç, E.B., Kraxner, J., Schmidt, D., Harrington, K.I. and Gerhardt, H.
bioRxiv : 2024.01.24.577027v2. 27 April 2024

Reconstructing extrachromosomal DNA structural heterogeneity from long-read sequencing data using Decoil.
Giurgiu, M., Wittstruck, N., Rodriguez-Fos, E., Chamorro González, R., Brückner, L., Krienelke-Szymansky, A., Helmsauer, K., Hartebrodt, A., Euskirchen, P., Koche, R.P., Haase, K., Reinert, K. and Henssen, A.G.
Genome Research 34 (9): 1355-1364. September 2024

Decoil: reconstructing extrachromosomal DNA structural heterogeneity from long-read sequencing data.
Giurgiu, M., Wittstruck, N., Rodriguez-Fos, E., Chamorro González, R., Brückner, L., Krienelke-Szymansky, A., Helmsauer, K., Hartebrodt, A., Euskirchen, P., Koche, R.P., Haase, K., Reinert, K. and Henssen, A.G.
Lecture Notes in Computer Science 14758 : 406-411. 17 May 2024

AI promoted virtual screening, structure-based hit optimization, and synthesis of novel COVID-19 S-RBD domain inhibitors.
Gkekas, I., Katsamakas, S., Mylonas, S., Fotopoulou, T., Magoulas, G.Ε., Tenchiu, A.C., Dimitriou, M., Axenopoulos, A., Rossopoulou, N., Kostova, S., Wanker, E.E., Katsila, T., Papahatjis, D., Gorgoulis, V.G., Koufaki, M., Karakasiliotis, I., Calogeropoulou, T., Daras, P. and Petrakis, S.
Journal of Chemical Information and Modeling 64 (22): 8562-8585. 25 November 2024

Mechanical strain activates planar cell polarity signaling to coordinate vascular cell dynamics.
Golbach, L., Saha, T., Odenthal-Schnittler, M., Lücking, J., Velic, A., Akmeric, E.B., Bornhorst, D., Popp, O., Mertins, P., Gunawan, F., Gerhardt, H., Macek, B., Trappmann, B., Schnittler, H.J., Galic, M. and Matis, M.
bioRxiv : 2024.06.25.600357. 26 June 2024

The paradigm change from reactive medical services to 3PM in ischemic stroke: a holistic approach utilising tear fluid multi-omics, mitochondria as a vital biosensor and AI-based multi-professional data interpretation.
Golubnitschaja, O., Polivka, J., Potuznik, P., Pesta, M., Stetkarova, I., Mazurakova, A., Lackova, L., Kubatka, P., Kropp, M., Thumann, G., Erb, C., Fröhlich, H., Wang, W., Baban, B., Kapalla, M., Shapira, N., Richter, K., Karabatsiakis, A., Smokovski, I., Schmeel, L.C., Gkika, E., Paul, F., Parini, P. and Polivka, J.
EPMA Journal 15 (1): 1-23. March 2024

Differential regulation of the proteome and phosphoproteome along the dorso-ventral axis of the early Drosophila embryo.
Gomez, J.M., Nolte, H., Vogelsang, E., Dey, B., Takeda, M., Giudice, G., Faxel, M., Haunold, T., Cepraga, A., Zinzen, R.P., Krüger, M., Petsalaki, E., Wang, Y.C. and Leptin, M.
eLife 13 : e99263. 3 October 2024

SERCA2a microdomain cAMP changes in heart failure with preserved ejection fraction.
Gotthardt, M. and Lehnart, S.E.
Cardiovascular Research 120 (3): 220-222. February 2024

Costs associated with insufficient physical activity in Germany: cross-sectional results from the baseline examination of the German national cohort (NAKO).
Gottschalk, S., König, H.H., Weber, A., Leitzmann, M.F., Stein, M.J., Peters, A., Flexeder, C., Krist, L., Willich, S.N., Nimptsch, K., Pischon, T., Gastell, S., Steindorf, K., Herbolsheimer, F., Ebert, N., Michels, K.B., Dorrn, A., Harth, V., Obi, N., Karch, A., Teismann, H., Völzke, H., Meinke-Franze, C., Klimeck, L., Seum, T.L. and Dams, J.
European Journal of Health Economics 10 May 2024 (In Press)

Impact of sex on clinical outcome in early multiple sclerosis.
Gottwald, N.S., Asseyer, S., Chien, C., Brasanac, J., Nauman, A.T., Rust, R., Schmitz-Hübsch, T., Bellmann-Strobl, J., Ruprecht, K., Paul, F., Regitz-Zagrosek, V., Gold, S.M. and Sperber, P.S.
Multiple Sclerosis and Related Disorders 88 : 105749. August 2024

Detecting unforeseen data properties with diffusion autoencoder embeddings using spine MRI data.
Graf, R., Hunecke, F., Pohl, S., Atad, M., Moeller, H., Starck, S., Kroencke, T., Bette, S., Bamberg, F., Pischon, T., Niendorf, T., Schmidt, C., Paetzold, J.C., Rueckert, D. and Kirschke, J.S.
arXiv : 2410.10220. 14 October 2024

Extracellular matrix remodeling in atopic dermatitis harnesses the onset of an asthmatic phenotype and is a potential contributor to the atopic march.
Graff, P., Woerz, D., Wilzopolski, J., Voss, A., Sarrazin, J., Blimkie, T.M., Weiner, J., Kershaw, O., Panwar, P., Hackett, T., Lau, S., Brömme, D., Beule, D., Lee, Y.A., Hancock, R.E.W., Gruber, A.D., Bäumer, W. and Hedtrich, S.
Journal of Investigative Dermatology 144 (5): 1010-1021. May 2024

CoNIC Challenge: Pushing the frontiers of nuclear detection, segmentation, classification and counting.
Graham, S., Vu, Q.D., Jahanifar, M., Weigert, M., Schmidt, U., Zhang, W., Zhang, J., Yang, S., Xiang, J., Wang, X., Rumberger, J.L., Baumann, E., Hirsch, P., Liu, L., Hong, C., Aviles-Rivero, A.I., Jain, A., Ahn, H., Hong, Y., Azzuni, H., Xu, M., Yaqub, M., Blache, M.C., Piégu, B., Vernay, B., Scherr, T., Böhland, M., Löffler, K., Li, J., Ying, W., Wang, C., Snead, D., Raza, S.E.A., Minhas, F. and Rajpoot, N.M.
Medical Image Analysis 92 : 103047. February 2024

Sex-specific structural and functional cardiac remodeling during healthy aging assessed by cardiovascular magnetic resonance.
Grassow, L., Gröschel, J., Saad, H., Krüger, L.D., Kuhnt, J., Müller, M., Hadler, T., Blaszczyk, E. and Schulz-Menger, J.
Clinical Research in Cardiology 11 March 2024 (In Press)

Interaction of sortilin with apolipoprotein E3 enables neurons to use long-chain fatty acids as alternative metabolic fuel.
Greda, A.K., Gomes, J.P., Zurawska-Plaksej, E., Fritsche-Guenther, R., Rudolph, I.M., Telugu, N.S., Cömert, C., Kirwan, J., Kunz, S., Rothe, M., Diecke, S., Bross, P. and Willnow, T.E.
bioRxiv : 2024.06.10.598173. 10 June 2024

CRISPR-enabled point-of-care genotyping for APOL1 genetic risk assessment.
Greensmith, R., Lape, I.T., Riella, C.V., Schubert, A.J., Metzger, J.J., Dighe, A.S., Tan, X., Hemmer, B., Rau, J., Wendlinger, S., Diederich, N., Schütz, A., Riella, L.V. and Kaminski, M.M.
EMBO Molecular Medicine 16 (10): 2619-2637. 14 October 2024

Kinin B1 receptor modulates glucose homeostasis and physical exercise capacity by altering adrenal catecholamine synthesis and secretion.
Gregnani, M.F., Budu, A., Batista, R.O., Ornellas, F.H., Estrela, G.R., Arruda, A.C., Freitas-Lima, L.C., Kremer, J.L., Favaroni Mendes, L.A., Casarini, D.E., Lotfi, C.F.P., Oyama, L.M., Bader, M. and Araujo, R.C.
Molecular and Cellular Endocrinology 579 : 112085. 1 January 2024

Cell-type-specific consequences of mosaic structural variants in hematopoietic stem and progenitor cells.
Grimes, K., Jeong, H., Amoah, A., Xu, N., Niemann, J., Raeder, B., Hasenfeld, P., Stober, C., Rausch, T., Benito, E., Jann, J.C., Nowak, D., Emini, R., Hoenicka, M., Liebold, A., Ho, A., Shuai, S., Geiger, H., Sanders, A.D. and Korbel, J.O.
Nature Genetics 56 (6): 1134-1146. June 2024

Therapy-related AML: long-term outcome in a large cohort of AML-patients with intensive and non-intensive therapy.
Gross, S., Ihlow, J., Busack, L., Adamiak, K., Schrezenmeier, J., Jesse, J., Schwarz, M., Flörcken, A., Vuong, L.G., Rieger, K., Krönke, J., le Coutre, P., Boldt, V., von Brünneck, A.C., Horst, D., Burmeister, T., Blau, I.W., Keller, U., Bullinger, L. and Westermann, J.
Blood Cancer Journal 14 (1): 160. 16 September 2024

Multiple sclerosis endophenotypes identified by high-dimensional blood signatures are associated with distinct disease trajectories.
Gross, C.C., Schulte-Mecklenbeck, A., Steinberg, O.V., Wirth, T., Lauks, S., Bittner, S., Schindler, P., Baranzini, S.E., Groppa, S., Bellmann-Strobl, J., Bünger, N., Chien, C., Dawin, E., Eveslage, M., Fleischer, V., Gonzalez-Escamilla, G., Gisevius, B., Haas, J., Kerschensteiner, M., Kirstein, L., Korsukewitz, C., Lohmann, L., Lünemann, J.D., Luessi, F., Meyer Zu Hörste, G., Motte, J., Ruck, T., Ruprecht, K., Schwab, N., Steffen, F., Meuth, S.G., Paul, F., Wildemann, B., Kümpfel, T., Gold, R., Hahn, T., Zipp, F., Klotz, L. and Wiendl, H.
Science Translational Medicine 16 (740): eade8560. March 2024

Targeting MYCN upregulates L1CAM tumor antigen in MYCN-dysregulated neuroblastoma to increase CAR T cell efficacy.
Grunewald, L., Andersch, L., Helmsauer, K., Schwiebert, S., Klaus, A., Henssen, A.G., Straka, T., Lodrini, M., Wicha, S.G., Fuchs, S., Hertwig, F., Westermann, F., Vitali, A., Caramel, C., Büchel, G., Eilers, M., Astrahantseff, K., Eggert, A., Höpken, U.E., Schulte, J.H., Blankenstein, T., Anders, K. and Künkele, A.
bioRxiv : 2024.01.27.576592. 29 January 2024

Deep cardiac phenotyping by cardiovascular magnetic resonance reveals subclinical focal and diffuse myocardial injury in patients with psoriasis (PSOR‑COR study).
Gröschel, J., Grassow, L., Blaszczyk, E., Lommel, K., Kokolakis, G., Sabat, R. and Schulz-Menger, J.
Clinical Research in Cardiology 16 May 2024 (In Press)

Trajectories of functional and structural myocardial parameters in post-COVID-19 syndrome - insights from mid-term follow-up by cardiovascular magnetic resonance.
Gröschel, J., Grassow, L., van Dijck, P., Bhoyroo, Y., Blaszczyk, E. and Schulz-Menger, J.
Frontiers in Cardiovascular Medicine 11 : 1357349. 2 April 2024

Comparison of manual and artificial intelligence based quantification of myocardial strain by feature tracking - a cardiovascular MR study in health and disease.
Gröschel, J., Kuhnt, J., Viezzer, D., Hadler, T., Hormes, S., Barckow, P., Schulz-Menger, J. and Blaszczyk, E.
European Radiology 34 (2): 1003-1015. February 2024

Advanced peptide nanoparticles enable robust and efficient delivery of gene editors across cell types.
Gustafsson, O., Krishna, S., Borate, S., Ghaeidamini, M., Liang, X., Saher, O., Cuellar, R., Birdsong, B.K., Roudi, S., Estupiñán, Y.H., Alici, E., Smith, E.C.I., Esbjörner, E.K., Spuler, S.K., de Jong, O.G., Escobar, H., Nordin, J.Z. and Andaloussi, S.E.L.
bioRxiv : 2024.11.27.624305. 4 December 2024

Integration of CTCF loops, methylome, and transcriptome in differentiating LUHMES as a model for imprinting dynamics of the 15q11-q13 locus in human neurons.
Gutierrez Fugón, O.J., Sharifi, O., Heath, N., Soto, D.C., Gomez, J.A., Yasui, D.H., Mendiola, A.J.P., O'Geen, He., Beitnere, U., Tomkova, M., Haghani, V., Dillon, G., Segal, D.J. and LaSalle, J.M.
Human Molecular Genetics 33 (19): 1711-1725. 1 October 2024

Comparing the extraction performance in mouse plasma of different biphasic methods for polar and nonpolar compounds.
Gutmann, F., Fritsche-Guenther, R., Dias, D.B. and Kirwan, J.A.
Journal of Proteome Research 23 (8): 2961-2969. 2 August 2024

Placental growth factor promotes neural invasion and predicts disease prognosis in resectable pancreatic cancer.
Göhrig, A., Hilfenhaus, G., Rosseck, F., Welzel, M., Moser, B., Barbone, G., Kunze, C.A., Rein, J., Wilken, G., Böhmig, M., Malinka, T., Tacke, F., Bahra, M., Detjen, K.M. and Fischer, C.
Journal of Experimental & Clinical Cancer Research 43 (1): 153. 30 May 2024

H

A prospective observational study of real-world treatment and outcome in secondary CNS lymphoma.
Habringer, S., Demel, U.M., Fietz, A.K., Lammer, F., Schroers, R., Hofer, S., Bairey, O., Braess, J., Meier-Stiegen, A.S., Stuhlmann, R., Schmidt-Hieber, M., Hoffmann, J., Zinngrebe, B., Kaiser, U., Reimer, P., Möhle, R., Fix, P., Höffkes, H.G., Langenkamp, U., Büschenfelde, C.M.Z., Hopfer, O., Stoltefuß, A., La Rosée, P., Blasberg, H., Jordan, K., Kaun, S., Meurer, A., Unteroberdörster, M., von Brünneck, A.C., Capper, D., Heppner, F.L., Chapuy, B., Janz, M., Schwartz, S., Konietschke, F., Vajkoczy, P., Korfel, A. and Keller, U.
European Journal of Cancer 196 : 113436. January 2024

A diagnostic challenge of KIT p.V559D and BRAF p.G469A mutations in a paragastric mass.
Habringer, S., Ihlow, J., Kleo, K., Klostermann, A., Schmidt, M., Chai, L., Knödler, M., Leyvraz, S., Sigler, C., Sinn, B., Maschmeyer, G., Jegodka, Y., Benary, M., Ott, C.E., Tinhofer, I., Schäfer, R., Möbs, M., Keller, U., Keilholz, U. and Rieke, D.T.
Oncologist 29 (10): 908-912. October 2024

Temporal BMP4 effects on mouse embryonic and extraembryonic development.
Hadas, R., Rubinstein, H., Mittnenzweig, M., Mayshar, Y., Ben-Yair, R., Cheng, S., Aguilera-Castrejon, A., Reines, N., Orenbuch, A.H., Lifshitz, A., Chen, D.Y., Elowitz, M.B., Zernicka-Goetz, M., Hanna, J.H., Tanay, A. and Stelzer, Y.
Nature 634 (8034): 652-661. 17 October 2024

Gamma oscillation plasticity is mediated via parvalbumin interneurons.
Hadler, M.D., Tzilivaki, A., Schmitz, D., Alle, H. and Geiger, J.R.P.
Science Advances 10 (5): eadj7427. 2 February 2024

Generation of two isogenic human iPSC lines (ZIPi013-B-1, ZIPi013-B-2) carrying a CRISPR/Cas9-mediated deletion of TRPM4.
Haferkamp, U., Telugu, N., Krieg, K., Schaefer, W., Lam, D., Binkle-Ladisch, L., Friese, M.A., Diecke, S. and Pless, O.
Stem Cell Research 81 : 103609. December 2024

Personality and the use of cancer screenings - Results of the German National Cohort.
Hajek, A., Becher, H., Brenner, H., Holleczek, B., Katzke, V., Kaaks, R., Minnerup, H., Karch, A., Baurecht, H., Leitzmann, M., Peters, A., Gastell, S., Ahrens, W., Haug, U., Nimptsch, K., Pischon, T., Michels, K.B., Dorrn, A., Klett-Tammen, C., Castell, S., Willich, S.N., Keil, T., Schipf, S., Meinke-Franze, C., Harth, V., Obi, N. and König, H.H.
Preventive Medicine Reports 41 : 102677. May 2024

MR beyond diagnostics at the ESMRMB annual meeting: MR theranostics and intervention.
Hajek, M., Flögel, U., Tavares, A., Nichelli, L., Kennerley, A., Kahn, T., Futterer, J., Firsiori, A., Grüll, H., Saha, N., Couñago, F., Aydogan, D.B., Caligiuri, M.E., Faber, C., Bell, L.C., Figueiredo, P., Vilanova, J.C., Santini, F., Mekle, R. and Waiczies, S.
Magnetic Resonance Materials in Physics, Biology and Medicine 37 (3): 323-328. July 2024

Reproducibility assessment of rapid strains in cardiac MRI: Insights and recommendations for clinical application.
Halfmann, M.C., Hopman, L.H.G.A., Körperich, H., Blaszczyk, E., Gröschel, J., Schulz-Menger, J., Salatzki, J., André, F., Friedrich, S. and Emrich, T.
European Journal of Radiology 174 : 111386. May 2024

Genomic characterization of AML with aberrations of chromosome 7: a multinational cohort of 519 patients.
Halik, A., Tilgner, M., Silva, P., Estrada, N., Altwasser, R., Jahn, E., Heuser, M., Hou, H.A., Pratcorona, M., Hills, R.K., Metzeler, K.H., Fenwarth, L., Dolnik, A., Terre, C., Kopp, K., Blau, O., Szyska, M., Christen, F., Krönke, J., Vasseur, L., Löwenberg, B., Esteve, J., Valk, P.J.M., Duchmann, M., Chou, W.C., Linch, D.C., Döhner, H., Gale, R.E., Döhner, K., Bullinger, L., Yoshida, K. and Damm, F.
Journal of Hematology & Oncology 17 (1): 70. 19 August 2024

Using paired-end read orientations to assess technical biases in capture Hi-C.
Hansen, P., Blau, H., Hecht, J., Karlebach, G., Krannich, A., Steinhaus, R., Truss, M. and Robinson, P.N.
NAR Genomics and Bioinformatics 6 (4): lqae156. December 2024

Tail-cuff versus radiotelemetry to measure blood pressure in mice and rats.
Harrison, D.G., Bader, M., Lerman, L.O., Fink, G., Karumanchi, S.A., Reckelhoff, J.F., Sequeira-Lopez, M.L.S. and Touyz, R.M.
Hypertension 81 (1): 3-5. January 2024

p53 terminates the regenerative fetal-like state after colitis-associated injury.
Hartl, K., Bayram, Ş., Wetzel, A., Harnack, C., Lin, M., Fischer, A.S., Liu, L., Beccacec, G., Mastrobuoni, G., Geisberger, S., Forbes, M., Monteiro, B.J.E., Macino, M., Flores, R.E., Engelmann, C., Mollenkopf, H.J., Schupp, M., Tacke, F., Sanders, A.D., Kempa, S., Berger, H. and Sigal, M.
Science Advances 10 (43): eadp8783. 25 October 2024

A clinical protocol for a German birth cohort study of the Maturation of Immunity Against respiratory viral Infections (MIAI).
Hartmann, C.R., Khan, R., Schöning, J., Richter, M., Willers, M., Pirr, S., Heckmann, J., Dirks, J., Morbach, H., Konrad, M., Fries, E., Winkler, M., Büchel, J., Seidenspinner, S., Fischer, J., Vollmuth, C., Meinhardt, M., Marissen, J., Schmolke, M., Haid, S., Pietschmann, T., Backes, S., Dölken, L., Löber, U., Keil, T., Heuschmann, P.U., Wöckel, A., Sagar, Dr., Ulas, T., Forslund-Startceva, S.K., Härtel, C. and Viemann, D.
Frontiers in Immunology 15 : 1443665. 17 September 2024

The T1-weighted/T2-weighted ratio as a biomarker of anti-NMDA receptor encephalitis.
Hartung, T.J., Cooper, G., Jünger, V., Komnenić, D., Ryan, L., Heine, J., Chien, C., Paul, F., Prüss, H. and Finke, C.
Journal of Neurology Neurosurgery and Psychiatry 95 (4): 366-373. 13 March 2024

Characterization of two iPSC lines from patients with maternally inherited leigh (MILS) and neuropathy, ataxia, and retinitis pigmentosa (NARP) syndrome carrying the MT-ATP6 m.8993 T>G mutation at different degrees of heteroplasmy.
Haschke, A.M., Diecke, S. and Schuelke, M.
Stem Cell Research 81 : 103547. December 2024

The effects of hypoxia on the immune-metabolic interplay in liver cancer.
He, Y., Xu, H., Liu, Y., Kempa, S., Vechiatto, C., Schmidt, R., Yilmaz, E.Y., Heidemann, L., Schnorr, J., Metzkow, S., Schellenberger, E., Häckel, A., Patzak, A., Müller, D.N. and Savic, L.J.
Biomolecules 14 (8): 1024. 17 August 2024

Mutations in CLCN6 as a novel genetic cause of neuronal ceroid lipofuscinosis in patients and a murine model.
He, H., Cao, X., He, F., Zhang, W., Wang, X., Peng, P., Xie, C., Yin, F., Li, D., Li, J., Wang, M., Klüssendorf, M., Jentsch, T.J., Stauber, T. and Peng, J.
Annals of Neurology 96 (3): 608-624. September 2024

Hippocampal hub failure is linked to long-term memory impairment in anti-NMDA-receptor encephalitis: insights from structural connectome graph theoretical network analysis.
Hechler, A., Kuchling, J., Müller-Jensen, L., Klag, J., Paul, F., Prüss, H. and Finke, C.
Journal of Neurology 271 (9): 5886-5898. September 2024

Next generation concepts in dermal delivery, theranostics, and preclinical testing.
Hedtrich, S. and Calderón, M.
Advanced Drug Delivery Reviews : 115482. 29 November 2024 (In Press)

Complete improvement of severe forearm complex regional pain syndrome with six high-dose incobotulinumtoxin A injections: clinical implications with respect to the literature.
Hefter, H., Moll, M. and Samadzadeh, S.
Toxins 16 (11): 488. 10 November 2024

Circulating tumor DNA sequencing for biologic classification and individualized risk stratification in patients with Hodgkin Lymphoma.
Heger, J.M., Mammadova, L., Mattlener, J., Sobesky, S., Cirillo, M., Altmüller, J., Kirst, E., Reinke, S., Klapper, W., Bröckelmann, P.J., Ferdinandus, J., Kaul, H., Schneider, G., Schneider, J., Schleifenbaum, J.K., Ullrich, R.T., Freihammer, M., Awerkiew, S., Lohmann, M., Klein, F., Nürnberg, P., Hallek, M., Rossi, D., Mauz-Körholz, C., Gattenlöhner, S., Bräuninger, A., Borchmann, P., von Tresckow, B. and Borchmann, S.
Journal of Clinical Oncology 42 (35): 4218-4230. 10 December 2024

Perioperative levels of IL8 and IL18, but not IL6, are associated with nucleus basalis magnocellularis atrophy three months after surgery.
Heinrich, M., Spies, C., Borchers, F., Feinkohl, I., Pischon, T., Slooter, A.J.C., von Haefen, C., Zacharias, N., Winterer, G. and Lammers-Lietz, F.
Journal of Neuroimmune Pharmacology 19 (1): 10. 14 March 2024

Insights, opportunities and challenges provided by large cell atlases.
Hemberg, M., Marini, F., Ghazanfar, S., Al Ajami, A., Abassi, N., Anchang, B., Benayoun, B.A., Cao, Y., Chen, K., Cuesta-Astroz, Y., DeBruine, Z., Dendrou, K.A., De Vlaminck, I., Imkeller, K., Korsunsky, I., Lederer, A.R., Meysman, P., Miller, C., Mullan, K., Ohler, U., Patikas, N., Schuck, N., Siu, J.H.Y., Triche, T.J., Tsankov, A., van der Laan, S.W., Yajima, M., Yang, J., Zanini, F. and Jelic, I.
arXiv : 2408.06563. 13 August 2024

Polycystin-1 loss of function increases susceptibility to atrial fibrillation through impaired DNA damage response.
Hendrickson, T., Giese, A., Fiedler, M., Perez, W., Reyes-Sanchez, E., Reyes-Lozano, M., Wang, S., Venegas-Zamora, L., Provasek, V., El-Essawi, A., Breitenbach, I., Fakuade, F.E., Kutschka, I., Schiattarella, G.G., Voigt, N., Valderrabano, M. and Altamirano, F.
bioRxiv : 2024.07.08.602618. 12 July 2024

Changes in physical activity and sedentary behavior during the first COVID-19 pandemic- restrictions in Germany: a nationwide survey : Running head: physical activity during the COVID-19 restrictions.
Herbolsheimer, F., Peters, A., Wagner, S., Willich, S.N., Krist, L., Pischon, T., Nimptsch, K., Gastell, S., Brandes, M., Brandes, B., Schikowski, T., Schmidt, B., Michels, K.B., Mikolajczyk, R., Harth, V., Obi, N., Castell, S., Heise, J.K., Lieb, W., Franzpötter, K., Karch, A., Teismann, H., Völzke, H., Meinke-Franze, C., Leitzmann, M., Stein, M.J., Brenner, H., Holleczek, B., Weber, A., Bohn, B., Kluttig, A. and Steindorf, K.
BMC Public Health 24 (1): 433. 12 February 2024

Rearrangements involving 11q23.3/KMT2A in adult AML: mutational landscape and prognostic implications - a HARMONY study.
Hernández-Sánchez, A., González, T., Sobas, M., Sträng, E., Castellani, G., Abáigar, M., Valk, P.J.M., Villaverde Ramiro, Á., Benner, A., Metzeler, K.H., Azibeiro, R., Tettero, J.M., Martínez-López, J., Pratcorona, M., Martínez Elicegui, J., Mills, K.I., Thiede, C., Sanz, G., Döhner, K., Heuser, M., Haferlach, T., Turki, A.T., Reinhardt, D., Schulze-Rath, R., Barbus, M., Hernández-Rivas, J.M., Huntly, B., Ossenkoppele, G., Döhner, H. and Bullinger, L.
Leukemia 38 (9): 1929-1937. September 2024

Cell-mechanical parameter estimation from 1D cell trajectories using simulation-based inference.
Heyn, J., Atienza Juanatey, M., Falcke, M. and Raedler, J.
bioRxiv : 2024.09.06.611766. 8 September 2024

Mesenchymal cell migration on one-dimensional micropatterns.
Heyn, J.C.J., Rädler, J.O. and Falcke, M.
Frontiers in Cell and Developmental Biology 12 : 1352279. 16 April 2024

Pangenome graph construction from genome alignments with Minigraph-Cactus.
Hickey, G., Monlong, J., Ebler, J., Novak, A.M., Eizenga, J.M., Gao, Y., Marschall, T., Li, H. and Paten, B.
Nature Biotechnology 42 (4): 663-673. April 2024

Clonal dominance defines metastatic dissemination in pancreatic cancer.
Ho, I.L., Li, C.Y., Wang, F., Zhao, L., Liu, J., Yen, E.Y., Dyke, C.A., Shah, R., Liu, Z., Çetin, A.O., Chu, Y., Citron, F., Attanasio, S., Corti, D., Darbaniyan, F., Del Poggetto, E., Loponte, S., Liu, J., Soeung, M., Chen, Z., Jiang, S., Jiang, H., Inoue, A., Gao, S., Deem, A., Feng, N., Ying, H., Kim, M., Giuliani, V., Genovese, G., Zhang, J., Futreal, A., Maitra, A., Heffernan, T., Wang, L., Do, K.A., Gargiulo, G., Draetta, G., Carugo, A., Lin, R. and Viale, A.
Science Advances 10 (11): eadd9342. 15 March 2024

Nourishing the mind: fasting for brain health.
Hofer, S.J. and Madeo, F.
Cell Metabolism 36 (8): 1635-1637. 6 August 2024

Preferences, adherence, and satisfaction: three years of treatment experiences of people with multiple sclerosis.
Hoffmann, O., Paul, F., Haase, R., Kern, R. and Ziemssen, T.
Patient preference and adherence 18 : 455-466. 22 February 2024

Translation of non-canonical open reading frames as a cancer cell survival mechanism in childhood medulloblastoma.
Hofman, D.A., Ruiz-Orera, J., Yannuzzi, I., Murugesan, R., Brown, A., Clauser, K.R., Condurat, A.L., van Dinter, J.T., Engels, S.A.G., Goodale, A., van der Lugt, J., Abid, T., Wang, L., Zhou, K.N., Vogelzang, J., Ligon, K.L., Phoenix, T.N., Roth, J.A., Root, D.E, Hubner, N., Golub, T.R., Bandopadhayay, P., van Heesch, S. and Prensner, J.R.
Molecular Cell 84 (2): 261-276. 18 January 2024

Gut dysbiosis contributes to TMAO accumulation in CKD.
Holle, J., McParland, V., Anandakumar, H., Gerritzmann, F., Behrens, F., Schumacher, F., Thumfart, J., Eckardt, K.U., Kleuser, B., Bartolomaeus, H. and Wilck, N.
Nephrology Dialysis Transplantation 39 (11): 1923-1926. November 2024

Gut microbiome alterations precede graft rejection in kidney transplantation patients.
Holle, J., Reitmeir, R., Behrens, F., Singh, D., Schindler, D., Potapenko, O., McParland, V., Anandakumar, H., Kanzelmeyer, N., Sommerer, C., Hartleif, S., Andassy, J., Heemann, U., Neuenhahn, M., Forslund-Startceva, S.K., Gerhard, M., Oh, J., Wilck, N., Löber, U. and Bartolomaeus, H.
medRxiv : 2024.05.21.24307660. 21 May 2024

Childhood and adolescence factors and multiple sclerosis: results from the German National Cohort (NAKO).
Holz, A., Obi, N., Ahrens, W., Berger, K., Bohn, B., Brenner, H., Fischer, B., Fricke, J., Führer, A., Gastell, S., Greiser, K.H., Harth, V., Heise, J.K., Holleczek, B., Keil, T., Klett-Tammen, C.J., Leitzmann, M., Lieb, W., Meinke-Franze, C., Michels, K.B., Mikolajczyk, R., Nimptsch, K., Peters, A., Pischon, T., Riedel, O., Schikowski, T., Schipf, S., Schmidt, B., Schulze, M.B., Stang, A., Hellwig, K., Riemann-Lorenz, K., Heesen, C. and Becher, H.
BMC Neurology 24 : 123. 13 April 2024

Multimodal profiling of peripheral blood identifies proliferating circulating effector CD4(+) T cells as predictors for response to integrin α4β7-blocking therapy in inflammatory bowel disease.
Horn, V., Cancino, C.A., Steinheuer, L.M., Obermayer, B., Fritz, K., Nguyen, A.L., Juhran, K.S., Plattner, C., Bösel, D., Oldenburg, L., Burns, M., Schulz, A.R., Saliutina, M., Mantzivi, E., Lissner, D., Conrad, T., Mashreghi, M.F., Zundler, S., Sonnenberg, E., Schumann, M., Haag, L.M., Beule, D., Flatz, L., Trjanoski, Z., D'Haens, G., Weidinger, C., Mei, H.E., Siegmund, B., Thurley, K. and Hegazy, A.N.
Gastroenterology 28 September 2024 (In Press)

REEV: review, evaluate and explain variants.
Hramyka, D., Sczakiel, H.L., Zhao, M.X., Stolpe, O., Nieminen, M., Adam, R., Danyel, M., Einicke, L., Hägerling, R., Knaus, A., Mundlos, S., Schwartzmann, S., Seelow, D., Ehmke, N., Mensah, M.A., Boschann, F., Beule, D. and Holtgrewe, M.
Nucleic Acids Research 52 (W1): W148-W158. 5 July 2024

Quantification of myocardial effective transverse relaxation time with magnetic resonance at 7.0 Tesla for a better understanding of myocardial (patho)physiology.
Huelnhagen, T., Serradas-Duarte, T., Hezel, F., Paul, K. and Niendorf, T.
In: Quantification of Biophysical Parameters in Medical Imaging. Springer, Cham, Switzerland, 381-406. ISBN 978-3-031-61846-8 5 November 2024

3D whole heart k-space-based super-resolution cardiac T1 mapping using rotated stacks.
Hufnagel, S., Schuenke, P., Schulz-Menger, J., Schaeffter, T. and Kolbitsch, C.
Physics in Medicine and Biology 69 (8): 085027. 9 April 2024

Coordinated inheritance of extrachromosomal DNAs in cancer cells.
Hung, K.L., Jones, M.G., Wong, I.T.L., Curtis, E.J., Lange, J.T., He, B.J., Luebeck, J., Schmargon, R., Scanu, E., Brückner, L., Yan, X., Li, R., Gnanasekar, A., Chamorro González, R., Belk, J.A., Liu, Z., Melillo, B., Bafna, V., Dörr, J.R., Werner, B., Huang, W., Cravatt, B.F., Henssen, A.G., Mischel, P.S and Chang, H.Y.
Nature 635 (8037): 201-209. 7 November 2024

Complete male-to-female sex reversal in XY mice lacking the miR-17~92 cluster.
Hurtado, A., Mota-Gómez, I., Lao, M., Real, F.M., Jedamzick, J., Burgos, M., Lupiáñez, D.G., Jiménez, R. and Barrionuevo, F.J.
Nature Communications 15 (1): 3809. 7 May 2024

Microglia from patients with multiple sclerosis display a cell-autonomous immune activation state.
Hyvärinen, T., Lotila, J., Giudice, L., Tujula, I., Nylund, M., Ohtonen, S., Scoyni, F., Jäntti, H., Pihlava, S., Skottman, H., Narkilahti, S., Airas, L., Malm, T. and Hagman, S.
bioRxiv : 2024.12.10.627477. 11 December 2024

Improving clinical documentation of rare neuromuscular diseases: development of a standardised information model.
Hübner, M., Nyoungui, E., Gazzero, E., Hassoun, L., Zschüntzsch, J., Krefting, D., Schepers, J. and Röttgerd, R.
Studies in Health Technology and Informatics 316 : 1418-1419. 22 August 2024

Visualizing sarcomere and cellular dynamics in skeletal muscle to improve cell therapies.
Hüttemeister, J., Rudolph, F., Radke, M.H., Fink, C., Friedrich, D., Preibisch, S., Falcke, M., Wagner, E., Lehnart, S.E. and Gotthardt, M.
bioRxiv : 2024.02.01.578471. 7 February 2024

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Diagnosing recipient- vs. donor-derived posttransplant myelodysplastic neoplasm via targeted single-cell mutational profiling.
Ihlow, J., Penter, L., Vuong, L.G., Bischoff, P., Obermayer, B., Trinks, A., Blau, O., Behnke, A., Conrad, T., Morkel, M., Wu, C.J., Westermann, J., Bullinger, L., von Brünneck, A.C., Blüthgen, N., Horst, D. and Praktiknjo, S.D.
Med 6 December 2024 (In Press)

Quantitative gait and balance outcomes for ataxia trials: consensus recommendations by the Ataxia Global Initiative Working Group on Digital-Motor Biomarkers.
Ilg, W., Milne, S., Schmitz-Hübsch, T., Alcock, L., Beichert, L., Bertini, E., Mohamed Ibrahim, N., Dawes, H., Gomez, C.M., Hanagasi, H., Kinnunen, K.M., Minnerop, M., Németh, A.H., Newman, J., Ng, Y.S., Rentz, C., Samanci, B., Shah, V.V., Summa, S., Vasco, G., McNames, J. and Horak, F.B.
Cerebellum 23 (4): 1566-1592. August 2024

Structure of tetrameric forms of the serotonin-gated 5-HT3(A) receptor ion channel.
Introini, B., Cui, W., Chu, X., Zhang, Y., Alves, A.C., Eckhardt-Strelau, L., Golusik, S., Tol, M., Vogel, H., Yuan, S. and Kudryashev, M.
EMBO Journal 4 September 2024

Extensive folding variability between homologous chromosomes in mammalian cells.
Irastorza-Azcarate, I., Kukalev, A., Kempfer, R., Thieme, C.J., Mastrobuoni, G., Markowski, J., Loof, G., Sparks, T.M., Brookes, E., Natarajan, K.N., Sauer, S., Fisher, A.G., Nicodemi, M., Ren, B., Schwarz, R.F., Kempa, S. and Pombo, A.
bioRxiv : 2024.05.08.591087. 10 May 2024

Non-viral targeted insertion of large payloads into T cells.
Izsvak, Z.
Nature Biomedical Engineering 16 September 2024 (In Press)

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Increased β(2)-adrenergic signaling promotes fracture healing through callus neovascularization in mice.
Jahn, D., Knapstein, P.R., Otto, E., Köhli, P., Sevecke, J., Graef, F., Graffmann, C., Fuchs, M., Jiang, S., Rickert, M., Erdmann, C., Appelt, J., Revend, L., Küttner, Q., Witte, J., Rahmani, A., Duda, G., Xie, W., Donat, A., Schinke, T., Ivanov, A., Tchouto, M.N., Beule, D., Frosch, K.H., Baranowsky, A., Tsitsilonis, S. and Keller, J.
Science Translational Medicine 16 (743): eadk9129. 17 April 2024

Image processing and analysis of light sheet microscopy data.
Jain, A., Ulman, V., Krumnikl, M., Pietzsch, T., Preibisch, S. and Tomančák, P.
In: Light Sheet Fluorescence Microscopy. Wiley‐VCH GmbH, Weinheim, Germany, 203-229. ISBN 9783527341351 18 March 2024

The role of microRNAs in defining LSECs cellular identity and in regulating F8 gene expression.
Jamil, M. A., Al-Rifai, R., Nuesgen, N., Altmüller, J., Oldenburg, J. and El-Maarri, O.
Frontiers in Genetics 15 : 1302685. 19 February 2024

Improving the sensitivity of myelin oligodendrocyte glycoprotein-antibody testing: exclusive or predominant MOG-IgG3 seropositivity - a potential diagnostic pitfall in patients with MOG-EM/MOGAD.
Jarius, S., Ringelstein, M., Schanda, K., Ruprecht, K., Korporal-Kuhnke, M., Viehöver, A., Hümmert, M.W., Schindler, P., Endmayr, V., Gastaldi, M., Trebst, C., Franciotta, D., Aktas, O., Höftberger, R., Haas, J., Komorowski, L., Paul, F., Reindl, M. and Wildemann, B.
Journal of Neurology 271 (7): 4660-4671. July 2024

Aberrant microbiomes are associated with increased antibiotic resistance gene load in hybrid mice.
Jarquín-Díaz, V.H., Ferreira, S.C.M., Balard, A., Ďureje, L., Macholán, M., Piálek, J., Bengtsson-Palme, J., Kramer-Schadt, S., Forslund-Startceva, S.K. and Heitlinger, E.
ISME Communications 4 (1): ycae053. 15 April 2024

Quantifying model uncertainty for semantic segmentation of Fluorine-19 MRI using stochastic gradient MCMC.
Javanbakhat, M., Starke, L., Waiczies, S. and Lippert, C.
Computer Vision and Image Understanding 241 : 103967. April 2024

Immediate reuse of patch-clamp pipettes after ultrasonic cleaning.
Jehasse, K., Jouhanneau, J.S., Wetz, S., Schwedt, A., Poulet, J.F.A., Neumann-Raizel, P. and Kampa, B.M.
Scientific Reports 14 (1): 1660. 18 January 2024

scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data.
Jeong, Y., Ronen, J., Kopp, W., Lutsik, P. and Akalin, A.
BMC Bioinformatics 25 (1): 257. 6 August 2024

In vitro functionality and endurance of GMP-compliant point-of-care BCMA.CAR-T cells at different timepoints of cryopreservation.
Jiang, G., Neuber, B., Hückelhoven-Krauss, A., Höpken, U., Ding, Y., Sedloev, D., Wang, L., Reichman, A., Eberhardt, F., Wermke, M., Rehm, A., Müller-Tidow, C., Schmitt, A. and Schmitt, M.
International Journal of Molecular Sciences 25 (3): 1394. 23 January 2024

Use of mesna prophylaxis in patients with cyclophosphamide-treated ANCA-associated vasculitis: cross-sectional survey of practitioners.
Joos, L., Gonzalez Chiappe, S., Neumann, T. and Mahr, A.
Rheumatology International 44 (12): 3099-3106. December 2024

Dentition patterns and molecular diversity of Mastophorus muris (Gmelin, 1790) (Nematoda: Spiruroidea) support a host-associated subdivision.
Jost, J., Hirzmann, J., Ďureje, Ľ., Maaz, D., Martin, P., Stach, T., Heitlinger, E. and Jarquín-Díaz, V.H.
Parasitology Research 123 (6): 237. June 2024

A gender perspective on diet, microbiome, and sex hormone interplay in cardiovascular disease.
Jovanovic, N., Zach, V., Crocini, C., Bahr, L.S., Forslund-Startceva, S.K. and Franz, K.
Acta Physiologica 240 (11): e14228. November 2024

An altered plasma lipidome-phenome network characterizes heart failure with preserved ejection fraction.
Jovanovic, N., Foryst-Ludwig, A., Klose, C., da Conceicao, C.R., Alasfar, L., Birkner, T., Forslund, S.K., Kintscher, U. and Edelmann, F.
ESC Heart Failure 11 (3): 1553-1566. June 2024

Inference of differentiation trajectories by transfer learning across biological processes.
Jumde, G., Spanjaard, B. and Junker, J.P.
Cell Systems 15 (1): 75-82.e5. 17 January 2024

Deep learning-based body composition analysis from whole-body magnetic resonance imaging to predict all-cause mortality in a large western population.
Jung, M., Raghu, V.K., Reisert, M., Rieder, H., Rospleszcz, S., Pischon, T., Niendorf, T., Kauczor, H.U., Völzke, H., Bülow, R., Russe, M.F., Schlett, C.L., Lu, M.T., Bamberg, F. and Weiss, J.
EBioMedicine 110 : 105467. December 2024

SetQuence & SetOmic: deep set transformers for whole genome and exome tumour analysis.
Jurenaite, N., León-Periñán, D., Donath, V., Torge, S. and Jäkel, R.
Biosystems 235 : 105095. January 2024

Amyloid-β aggregates activate peripheral monocytes in mild cognitive impairment.
Juul-Madsen, K., Parbo, P., Ismail, R., Ovesen, P.L., Schmidt, V., Madsen, L.S., Thyrsted, J., Gierl, S., Breum, M., Larsen, A., Andersen, M.N., Romero-Ramos, M., Holm, C.K., Andersen, G.R., Zhao, H., Schuck, P., Nygaard, J.V., Sutherland, D.S., Eskildsen, S.F., Willnow, T.E., Brooks, D.J. and Vorup-Jensen, T.
Nature Communications 15 (1): 1224. 9 February 2024

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Peripheral priming induces plastic transcriptomic and proteomic responses in circulating neutrophils required for pathogen containment.
Kaiser, R., Gold, C., Joppich, M., Loew, Q., Akhalkatsi, A., Mueller, T.T., Offensperger, F., Droste Zu Senden, A., Popp, O., di Fina, L., Knottenberg, V., Martinez-Navarro, A., Eivers, L., Anjum, A., Escaig, R., Bruns, N., Briem, E., Dewender, R., Muraly, A., Akgöl, S., Ferraro, B., Hoeflinger, J.K.L., Polewka, V., Khaled, N.B., Allgeier, J., Tiedt, S., Dichgans, M., Engelmann, B., Enard, W., Mertins, P., Hubner, N., Weckbach, L., Zimmer, R., Massberg, S., Stark, K., Nicolai, L. and Pekayvaz, K.
Science Advances 10 (12): eadl1710. 22 March 2024

Automated quality control of small animal MR neuroimaging data.
Kalantari, A., Shahbazi, M., Schneider, M., Raikes, A.C., Frazão, V.V., Bhattrai, A., Carnevale, L., Diao, Y., Franx, B.A.A., Gammaraccio, F., Goncalves, L.M., Lee, S., van Leeuwen, E.M., Michalek, A., Mueller, S., Olvera, A.R., Padro, D., Selim, M.K., van der Toorn, A., Varriano, F., Vrooman, R., Wenk, P., Albers, H.E., Boehm-Sturm, P., Budinger, E., Canals, S., De Santis, S., Brinton, R.D., Dijkhuizen, R.M., Eixarch, E., Forloni, G., Grandjean, J., Hekmatyar, K., Jacobs, R.E., Jelescu, I., Kurniawan, N.D., Lembo, G., Longo, D.L., Sta Maria, N.S., Micotti, E., Muñoz-Moreno, E., Ramos-Cabrer, P., Reichardt, W., Soria, G., Ielacqua, G.D. and Aswendt, M.
Imaging Neuroscience 27 September 2024

Tolerance induction through early feeding to prevent food allergy in infants and children with sensitization against food allergens (TIFFANI): rationale, study design, and methods of a randomized controlled trial.
Kalb, B., Meixner, L., Heller, S., Dölle-Bierke, S., Roll, S., Tissen-Diabaté, T., Lau, S., Forslund, S., Marenholz, I., Lee, Y.A., Thiel, A., Babina, M., Scheffel, J., Worm, M. and Beyer, K.
Trials 25 : 272. 19 April 2024

SORCS2 activity in pancreatic α-cells safeguards insulin granule formation and release from glucose-stressed β-cells.
Kalnytska, O., Qvist, P., Kunz, S., Conrad, T., Willnow, T.E. and Schmidt, V.
iScience 27 (1): 108725. 19 January 2024

SorLA restricts TNFα release from microglia to shape a glioma-supportive brain microenvironment.
Kaminska, P., Ovesen, P.L., Jakiel, M., Obrebski, T., Schmidt, V., Draminski, M., Bilska, A.G., Bieniek, M., Anink, J., Paterczyk, B., Jensen, A.M.G., Piatek, S., Andersen, O.M., Aronica, E., Willnow, T.E., Kaminska, B., Dabrowski, M.J. and Malik, A.R.
EMBO Reports 25 (5): 2278-2305. May 2024

Refined enterotyping reveals dysbiosis in global fecal metagenomes.
Keller, M.I., Nishijima, S., Podlesny, D., Kim, C.Y., Robbani, S.M., Schudoma, C., Fullam, A., Richter, J., Letunic, I., Akanni, W., Orakov, A., Schmidt, T.S., Marotta, F., Trebicka, J., Kuhn, M., Van Rossum, T. and Bork, P.
bioRxiv : 2024.08.13.607711v2. 14 August 2024

Abklärung und OP-Indikationen bei malignen Lymphknoten des unteren GI-Traktes.
Keller, U. and Merz, I.
In: Chirurgie des unteren Gastrointestinaltrakts und Allgemeine Chirurgie. Springer Reference Medizin . Springer, Berlin, Heidelberg, 177-185. ISBN 978-3-662-63355-7 31 July 2024

MRT-basierte automatische Nierensegmentierung und daraus abgeleitete Marker: Eine Auswertung der bevölkerungsweiten NAKO Gesundheitsstudie.
Kellner, E., Sekula, P., Lipovsek, J., Russe, M., Horbach, H., Schlett, C.L., Nauck, M., Völzke, H., Kroencke, T., Bette, S., Kauczor, H.U., Keil, T., Pischon, T., Heid, I.M., Peters, A., Niendorf, T., Lieb, W., Bamberg, F., Büchert, M, Reichardt, W., Reisert, M. and Köttgen, A.
Deutsches Arzteblatt International 121 : 284-90. 3 May 2024

Imaging markers derived from MRI-based automated kidney segmentation—an analysis of data from the German National Cohort (NAKO Gesundheitsstudie).
Kellner, E., Sekula, P., Lipovsek, J., Russe, M., Horbach, H., Schlett, C.L., Nauck, M., Völzke, H., Kröncke, T., Bette, S., Kauczor, H.U., Keil, T., Pischon, T., Heid, I.M., Peters, A., Niendorf, T., Lieb, W., Bamberg, F., Büchert, M., Reichardt, W., Reisert, M. and Köttgen, A.
Deutsches Arzteblatt International 121 (9): 284-290. 3 May 2024

Multiscale networks in multiple sclerosis.
Kennedy, K.E., Kerlero de Rosbo, N., Uccelli, A., Cellerino, M., Ivaldi, F., Contini, P., De Palma, R., Harbo, H.F., Berge, T., Bos, S.D., Høgestøl, E.A., Brune-Ingebretsen, S., de Rodez Benavent, S.A., Paul, F., Brandt, A.U., Bäcker-Koduah, P., Behrens, J., Kuchling, J., Asseyer, S., Scheel, M., Chien, C., Zimmermann, H., Motamedi, S., Kauer-Bonin, J., Saez-Rodriguez, J., Rinas, M., Alexopoulos, L.G., Andorra, M., Llufriu, S., Saiz, A., Blanco, Y., Martinez-Heras, E., Solana, E., Pulido-Valdeolivas, I., Martinez-Lapiscina, E.H., Garcia-Ojalvo, J. and Villoslada, P.
PLoS Computational Biology 20 (2): e1010980. February 2024

The other site of rhabdomyosarcoma.
Kern, L., Henssen, A., Eggert, A. and Scheer, M.
Cancer Medicine 13 (20): e70348. October 2024

Cytosolic nucleic acid sensors and interferon beta-1 activation drive radiation-induced anti-tumour immune effects in human pancreatic cancer cells.
Kerschbaum-Gruber, S., Kleinwächter, A., Popova, K., Kneringer, A., Appel, L.M., Stasny, K., Röhrer, A., Dias, A.B., Benedum, J., Walch, L., Postl, A., Barna, S., Kratzer, B., Pickl, W.F., Akalin, A., Horvat, F., Franke, V., Widder, J., Georg, D. and Slade, D.
Frontiers in Immunology 15 : 1286942. 20 September 2024

Using routinely collected clinical data for circadian medicine: A review of opportunities and challenges.
Kervezee, L., Dashti, H.S., Pilz, L.K., Skarke, C. and Ruben, M.D.
PLOS Digital Health 3 (5): e0000511. 23 May 2024

TF-FVIIa PAR2-β-arrestin in mouse signaling sustains organ dysfunction in coxsackievirus B3 infection.
Kespohl, M., Goetzke, C.C., Althof, N., Bredow, C., Kelm, N., Pinkert, S., Bukur, T., Bukur, V., Grunz, K., Kaur, D., Heuser, A., Mülleder, M., Sauter, M., Klingel, K., Weiler, H., Berndt, N., Gaida, M.M., Ruf, W. and Beling, A.
Arteriosclerosis Thrombosis and Vascular Biology 44 (4): 843-865. April 2024

A novel astrocyte-neuron interaction to control complex animal behavior.
Kettenmann, H.
Neuroscience Bulletin 9 December 2024 (In Press)

Rudolf Virchow and the discovery of the Müller cell.
Kettenmann, H.
Graefes Archive for Clinical and Experimental Ophthalmology 262 (11): 3417-3420. November 2024

Dysnatriämien - Konzepte und klinische Aufarbeitung [Dysnatremias - concepts and clinical work-up].
Kettritz, R.
Deutsche Medizinische Wochenschrift 149 (3): 86-92. February 2024

Non-invasive assessment of cerebral hemodynamics using resting-state functional magnetic resonance imaging in multiple sclerosis and age-related white matter lesions.
Khalil, A., Asseyer, S., Rust, R., Schmitz-Hübsch, T., Fiebach, J.B., Paul, F. and Chien, C.
Human Brain Mapping 45 (16): e70076. November 2024

TENM4 is an essential transduction component for touch and pain.
Khallaf, M.A., Huang, A.T.L., Dalmasso, L., Chakrabarti, S., Groeneveld, R., Sierra, Y.A.B., Garcia-Contreras, J.A., Schutz, A., Bégay, V., Hedtrich, S., Zhong, W., Popp, O., Mertins, P. and Lewin, G.R.
bioRxiv : 2024.10.10.617546. 12 October 2024

Intestinal retinol saturase is implicated in the development of obesity and epithelial homeostasis upon injury.
Kiefer, M.F., Meng, Y., Yang, N., Vahrenbrink, M., Wulff, S., Li, C., Wowro, S.J., Petricek, K.M., Sommerfeld, M., Flores, R.E., Obermayer, B., Piepelow, K., Klaus, S., Hartl, K., Guillot, A., Tacke, F., Sigal, M. and Schupp, M.
American Journal of Physiology Endocrinology and Metabolism 327 (2): E203-E216. August 2024

Heat stress causes chromatin accessibility and related gene expression changes in crown tissues of barley (Hordeum vulgare).
Kiełbowicz-Matuk, A., Smaczniak, C., Mikołajczak, K., Kuczyńska, A., Xu, X., Braeuning, C. and Krajewski, P.
Plant Molecular Biology 114 (6): 115. 22 October 2024

The association of a healthy lifestyle index and imaging-based body fat distribution with glycemic status and Type 2 diabetes in the Multi Ethnic Cohort: a cross-sectional analysis.
Klapp, R., Nimptsch, K., Pischon, T., Wilkens, L.R., Lim, U., Guillermo, C., Setiawan, V.W., Shepherd, J.A, Le Marchand, L. and Maskarinec, G.
European Journal of Clinical Nutrition 78 (3): 236-242. March 2024

Dynamic parametric MRI and deep learning: unveiling renal pathophysiology through accurate kidney size quantification.
Klein, T., Gladytz, T., Millward, J.M., Cantow, K., Hummel, L., Seeliger, E., Waiczies, S., Lippert, C. and Niendorf, T.
NMR in Biomedicine 37 (4): e5075. April 2024

β(2)-integrins control HIF1α activation in human neutrophils.
Kling, L., Eulenberg-Gustavus, C., Jerke, U., Rousselle, A., Eckardt, K.U., Schreiber, A. and Kettritz, R.
Frontiers in Immunology 15 : 1406967. 14 October 2024

Quantitative modeling of signaling in aggressive B cell lymphoma unveils conserved core network.
Klinger, B., Rausch, I., Siebert, A., Kutz, H., Kruse, V., Kirchner, M., Mertins, P., Kieser, A., Blüthgen, N. and Kube, D.
PLoS Computational Biology 20 (10): e1012488. 1 October 2024

Childhood trauma and somatic and mental illness in adulthood.
Klinger-König, J., Erhardt, A., Streit, F., Völker, M.P., Schulze, M.B, Keil, T., Fricke, J., Castell, S., Klett-Tammen, C.J., Pischon, T., Karch, A., Teismann, H., Michels, K.B., Greiser, K.H., Becher, H., Karrasch, S., Ahrens, W., Meinke-Franze, C., Schipf, S., Mikolajczyk, R., Führer, A., Brandes, B., Schmidt, B., Emmel, C., Leitzmann, M., Konzok, J., Peters, A., Obi, N., Brenner, H., Holleczek, B., Moreno Velásquez, I., Deckert, J., Baune, B.T., Rietschel, M., Berger, K. and Grabe, H.J.
Deutsches Arzteblatt International 121 (1): 1-8. 12 January 2024

Application of the international criteria for optic neuritis in the Acute Optic Neuritis Network.
Klyscz, P., Asseyer, S., Alonso, R., Bereuter, C., Bialer, O., Bick, A., Carta, S., Chen, J.J., Cohen, L., Cohen-Tayar, Y., Contentti, E.C., Dale, R.C., Flanagan, E.P., Gernert, J.A., Haas, J., Havla, J., Heesen, C., Hellmann, M., Levin, N., Lopez, P., Lotan, I., Luis, M.B., Mariotto, S., Mayer, C., Vergara, A.J.M., Ocampo, C., Ochoa, S., Oertel, F.C., Olszewska, M., Uribe, J.L.P., Sastre-Garriga, J., Scocco, D., Ramanathan, S., Rattanathamsakul, N., Shi, F.D., Shifa, J., Simantov, I., Siritho, S., Tiosano, A., Tisavipat, N., Torres, I., Dembinsky, A.V., Vidal-Jordana, A., Wilf-Yarkoni, A., Wu, Ti, Zamir, S., Zarco, L.A., Zimmermann, H.G., Petzold, A., Paul, F. and Stiebel-Kalish, H.
Annals of Clinical and Translational Neurology 11 (9): 2473-2484. September 2024

LRRC8/VRAC volume-regulated anion channels are crucial for hearing.
Knecht, D.A., Zeziulia, M., Bhavsar, M., Puchkov, D., Maier, H. and Jentsch, T.J.
Journal of Biological Chemistry 300 (7): 107436. July 2024

Aggressive lymphoma after CD19 CAR T-cell therapy.
Kobbe, G., Brüggemann, M., Baermann, B.N., Wiegand, L., Trautmann, H., Yousefian, S., Libertini, S., Menssen, H.D., Maier, H.J., Ulrich, P., Gao, J., Bruch, P.M., Liebers, N., Radujkovic, A., Seifert, M., Schniederjohann, C., Paramasivam, N., Fitzgerald, D., Seidel, M., Esposito, I., Germing, U., Cadeddu, R.P., Nachtkamp, K., Jäger, P., Ulrych, T., Fischer, J.C., Rox, J.M., Giesel, F., Koch, R., Antoch, G., Distler, J.H.W., Meuth, S.G., Jacobsen, M., Hübschmann, D., Lu, J., Iaccarino, I., Haas, S., Damm, F. and Dietrich, S.
New England Journal of Medicine 391 (13): 1217-1226. 3 October 2024

Rbm8a deficiency causes hematopoietic defects by modulating Wnt/PCP signaling.
Kocere, A., Chiavacci, E., Soneson, C., Wells, H.H., Mendez-Acevedo, K.M., MacGowan, J.S., Jacobson, S.T., Hiltabidle, M.S., Raghunath, A., Shavit, J.A., Panákova, D., Williams, M.L.K., Robinson, M.D., Mosimann, C. and Burger, A.
bioRxiv : 2023.04.12.536513v4. 1 February 2024

Bi-allelic PRRT2 variants may predispose to Self-limited Familial Infantile Epilepsy.
Koko, M., Elseed, M.A., Mohammed, I.N., Hamed, A.A., Abd Allah, A.S.I., Yahia, A., Siddig, R.A., Altmüller, J., Toliat, M.R., Elmahdi, E.O., Amin, M., Ahmed, E. A., Eltazi, I.Z.M., Elmugadam, F.A., Abdelgadir, W.A., Eltaraifee, E., Ibrahim, M.O.M., Ali, N.M.H., Malik, H.M., Babai, A.M., Bakhit, Y.H., Nürnberg, P., Ibrahim, M.E., Salih, M.A., Schubert, J., Elsayed, L.E.O. and Lerche, H.
European Journal of Human Genetics 32 (10): 1338-1342. October 2024

Synthetic lethality by PARP inhibitors: new mechanism uncovered based on unresolved transcription-replication conflicts.
Kolesnichenko, M. and Scheidereit, C.
Signal Transduction and Targeted Therapy 9 (1): 179. 29 July 2024

Superficial white matter integrity in neuromyelitis optica spectrum disorder and multiple sclerosis.
Komnenić, D., Phillips, O.R., Joshi, S.H., Chien, C., Schmitz-Hübsch, T., Asseyer, S., Paul, F. and Finke, C.
Multiple Sclerosis Journal Experimental Translational and Clinical 10 (1): 20552173231226107. 2024

Membrane properties and coupling of macroglia in the optic nerve.
Kompier, N., Semtner, M., Walter, S., Kakabadze, N., Steinhäuser, C., Nolte, C. and Kettenmann, H.
Current Research in Neurobiology 7 : 100137. 21 August 2024

Diverse modulatory effects of bibenzyls from Dendrobium species on human immune cell responses under inflammatory conditions.
Kongkatitham, V., Dehlinger, A., Chaotham, C., Likhitwitayawuid, K., Böttcher, C. and Sritularak, B.
PLoS ONE 19 (2): e0292366. 1 February 2024

International consensus on fasting terminology.
Koppold, D.A., Breinlinger, C., Hanslian, E., Kessler, C., Cramer, H., Khokhar, A.R., Peterson, C.M., Tinsley, G., Vernieri, C., Bloomer, R.J., Boschmann, M., Bragazzi, N.L., Brandhorst, S., Gabel, K., Goldhamer, A.C., Grajower, M.M., Harvie, M., Heilbronn, L., Horne, B.D., Karras, S.N., Langhorst, J., Lischka, E., Madeo, F., Mitchell, S.J., Papagiannopoulos-Vatopaidinos, I.E., Papagiannopoulou, M., Pijl, H., Ravussin, E., Ritzmann-Widderich, M., Varady, K., Adamidou, L., Chihaoui, M., de Cabo, R., Hassanein, M., Lessan, N., Longo, V., Manoogian, E.N.C., Mattson, M.P., Muhlestein, J.B., Panda, S., Papadopoulou, S.K., Rodopaios, N.E., Stange, R. and Michalsen, A.
Cell Metabolism 36 (8): 1779-1794. 6 August 2024

Interpreting deep neural networks for the prediction of translation rates.
Korbel, F., Eroshok, E. and Ohler, U.
BMC Genomics 25 (1): 1061. 9 November 2024

Unlocking the secrets of structural variants in a healthy tissue.
Korbel, J.O. and Sanders, A.D.
Nature Genetics 56 (6): 1047-1048. June 2024

Frequent, high density expression of surface CD38 as a potential therapeutic target in adult T-lineage acute lymphoblastic leukemia.
Koslowski, S., Glauben, R., Habringer, S., Burmeister, T., Keller, U., Brüggemann, M., Gökbuget, N. and Schwartz, S.
Haematologica 109 (2): 661-665. February 2024

Endogenous tagging of Munc13-1 with a SNAP tag as a tool for monitoring synapse nanoarchitecture.
Kowald, M., Bachollet, S.P.J.T., Benseler, F., Steinecker, M., Kaushik, S., Soykan, T., Siqi, S., Birke, R., Ilic, D., Brose, N., Hörnberg, H., Lehmann, M., Rizzoli, S.O., Broichhagen, J. and Lipstein, N.
bioRxiv : 2024.10.08.617143. 10 October 2024

Cardioprotective properties of OMT-28, a synthetic analog of omega-3 epoxyeicosanoids.
Kranrod, J., Konkel, A., Valencia, R., Darwesh, A., Fischer, R., Schunck, W.H. and Seubert, J.M.
Journal of Biological Chemistry 300 (6): 107372. June 2024

Molecular and cellular mechanisms of motor circuit development.
Kratsios, P., Zampieri, N., Carrillo, R., Mizumoto, K., Sweeney, L.B. and Philippidou, P.
Journal of Neuroscience 44 (40): e1238242024. 2 October 2024

Molecular architecture of synaptic vesicles.
Kravčenko, U., Ruwolt, M., Kroll, J., Yushkevich, A., Zenkner, M., Ruta, J., Lotfy, R., Wanker, E.E., Rosenmund, C., Liu, F. and Kudryashev, M.
Proceedings of the National Academy of Sciences of the United States of America 121 (49): e2407375121. 3 December 2024

Persistent cognitive deficits in anti-LGI1 encephalitis are linked to a reorganization of structural brain networks.
Krohn, S., Müller-Jensen, L., Kuchling, J., Romanello, A., Bartsch, T., Leypoldt, F., Paul, F., Püss, H. and Finke, C.
bioRxiv : 2024.03.07.583948. 11 March 2024

Gait Variability as a Potential motor marker of cerebellar disease—relationship between variability of stride, arm swing and trunk movements, and walking speed.
Kroneberg, D., Nümann, A., Minnerop, M., Rönnefarth, M., Endres, M., Kühn, A.A., Paul, F., Doss, S., Solbrig, S., Elshehabi, M., Maetzler, W. and Schmitz-Hübsch, T.
Sensors 24 (11): 3476. 1 June 2024

Deep learning-based whole-brain B(1)(+)-mapping at 7T.
Krueger, F., Aigner, C.S., Lutz, M., Riemann, L.T., Degenhardt, K., Hadjikiriakos, K., Zimmermann, F.F., Hammernik, K., Schulz-Menger, J., Schaeffter, T. and Schmitter, S.
Magnetic Resonance in Medicine 27 October 2024 (In Press)

A high proportion of germline variants in pediatric chronic myeloid leukemia.
Krumbholz, M., Dolnik, A., Sträng, E., Ghete, T., Skambraks, S., Hutter, S., Simonis, A., Stegelmann, F., Suttorp, M., Horn, A.H.C., Sticht, H., Haferlach, T., Bullinger, L. and Metzler, M.
Molecular Cancer 23 (1): 206. 26 September 2024

Evolution of retinal degeneration and prediction of disease activity in relapsing and progressive multiple sclerosis.
Krämer, J., Balloff, C., Weise, M., Koska, V., Uthmeier, Y., Esderts, I., Nguyen-Minh, M., Zimmerhof, M., Hartmann, A., Dietrich, M., Ingwersen, J., Lee, J.I., Havla, J., Kümpfel, T., Kerschensteiner, M., Häußler, V., Heesen, C., Stellmann, J.P., Zimmermann, H.G., Oertel, F.C., Ringelstein, M., Brandt, A.U., Paul, F., Aktas, O., Hartung, H.P., Wiendl, H., Meuth, S.G. and Albrecht, P.
Nature Communications 15 (1): 5243. 19 June 2024

In vitro testing of drug response in primary multiple myeloma cells using a microwell-based technology.
Krüger, J., Blau, I.W., Blau, O., Bettelli, A., Rocchi, L., Bocchi, M., Krönke, J., Bullinger, L., Keller, U. and Nogai, A.
Leukemia Research 147 : 107599. December 2024

A phase I study of MAGE-A1-targeted T1367 T-cell receptor-based cell therapy in patients with advanced multiple myeloma.
Krüger, J., Obenaus, M., Blau, I.W., Hoser, D., Vaegler, M., Rauschenbach, H., Anagnostopoulos, I., Jöhrens, K., Scheuplein, V., Kieback, E., Böhme, J., Von Brünneck, A.C., Krönke, J., Busse, A., Willimsky, G., Blankenstein, T., Pezzutto, A., Keller, U. and Nogai, A.
Haematologica 12 September 2024 (In Press)

The big chill: growth of in situ structural biology with cryo-electron tomography.
Kudryashev, M.
QRB Discovery 5 : e10. 13 December 2024

Beyond hemoglobin: critical role of 2,3-bisphosphoglycerate mutase in kidney function and injury.
Kulow, V.A., Roegner, K., Labes, R., Kasim, M., Mathia, S., Czopek, C.S., Berndt, N., Becker, P.N., Ter-Avetisyan, G., Luft, F.C., Enghard, P., Hinze, C., Klocke, J., Eckardt, K.U., Schmidt-Ott, K.M., Persson, P.B., Rosenberger, C. and Fähling, M.
Acta Physiologica : e14242. 18 October 2024 (In Press)

UV light exposure versus vitamin D supplementation: a comparison of health benefits and vitamin D metabolism in a pig model.
Kühn, J., Brandsch, C., Bailer, A.C., Kiourtzidis, M., Hirche, F., Chen, C.Y., Markó, L., Bartolomaeus, T.U.P., Löber, U., Michel, S., Wensch-Dorendorf, M., Forslund-Startceva, S.K. and Stangl, G.I.
Journal of Nutritional Biochemistry 134 : 109746. December 2024

Protein intake and cancer: an umbrella review of systematic reviews for the evidence‑based guideline of the German Nutrition Society.
Kühn, T., Kalotai, N., Amini, A.M., Haardt, J., Lehmann, A., Schmidt, A., Buyken, A.E., Egert, S., Ellinger, S., Kroke, A., Lorkowski, S., Louis, S., Schulze, M.B., Schwingshackl, L., Siener, R., Stangl, G.I., Watzl, B., Zittermann, A. and Nimptsch, K.
European Journal of Nutrition 63 (5): 1471-1486. August 2024

Management of immune thrombotic thrombocytopenic purpura without therapeutic plasma exchange.
Kühne, L., Knöbl, P., Eller, K., Thaler, J., Sperr, W.R., Gleixner, K., Osterholt, T., Kaufeld, J., Menne, J., Buxhofer-Ausch, V., Mühlfeld, A., Seelow, E., Schreiber, A., Todorova, P., Cukoski, S., Jabs, W.J., Özcan, F., Gäckler, A., Schönfelder, K., Seibert, F.S., Westhoff, T., Schwenger, V., Eichenauer, D.A., Völker, L.A. and Brinkkoetter, P.T.
Blood 144 (14): 1486-1495. 3 October 2024

Update on the diagnosis and treatment of neuromyelitis optica spectrum disorders (NMOSD) - revised recommendations of the Neuromyelitis Optica Study Group (NEMOS). Part II: Attack therapy and long-term management.
Kümpfel, T., Giglhuber, K., Aktas, O., Ayzenberg, I., Bellmann-Strobl, J., Häußler, V., Havla, J., Hellwig, K., Hümmert, M.W., Jarius, S., Kleiter, I., Klotz, L., Krumbholz, M., Paul, F., Ringelstein, M., Ruprecht, K., Senel, M., Stellmann, J.P., Bergh, F.T., Trebst, C., Tumani, H., Warnke, C., Wildemann, B. and Berthele, A.
Journal of Neurology 271 (1): 141-176. January 2024

L

Pooled overexpression screening identifies PIPPI as a novel microprotein involved in the ER stress response.
Lafranchi, L., Spinner, A., Hornisch, M., Schlesinger, D., Luzon, C.N., Brinkenstråhle, L., Shao, R., Piazza, I. and Elsässer, S.J.
bioRxiv : 2024.12.08.627409. 9 December 2024

Long-read sequencing reveals extensive gut phageome structural variations driven by genetic exchange with bacterial hosts.
Lai, S., Wang, H., Bork, P., Chen, W.H. and Zhao, X.M.
Science Advances 10 (33): eadn3316. 16 August 2024

An exploratory research report on brain mineralization in postoperative delirium and cognitive decline.
Lammers-Lietz, F., Borchers, F., Feinkohl, I., Hetzer, S., Kanar, C., Konietschke, F., Lachmann, G., Chien, C., Spies, C., Winterer, G., Zaborszky, L., Zacharias, N. and Paul, F.
European Journal of Neuroscience 59 (10): 2646-2664. May 2024

Mapping lineage-traced cells across time points with moslin.
Lange, M., Piran, Z., Klein, M., Spanjaard, B., Klein, D., Junker, J.P., Theis, F.J. and Nitzan, M.
Genome Biology 25 (1): 277. 21 October 2024

Estimates of protection levels against SARS-CoV-2 infection and severe COVID-19 in Germany before the 2022/2023 winter season: the IMMUNEBRIDGE project.
Lange, B., Jaeger, V.K., Harries, M., Rücker, V., Streeck, H., Blaschke, S., Petersmann, A., Toepfner, N., Nauck, M., Hassenstein, M.J., Dreier, M., von Holt, I., Budde, A., Bartz, A., Ortmann, J., Kurosinski, M.A., Berner, R., Borsche, M., Brandhorst, G., Brinkmann, M., Budde, K., Deckena, M., Engels, G., Fenzlaff, M., Härtel, C., Hovardovska, O., Katalinic, A., Kehl, K., Kohls, M., Krüger, S., Lieb, W., Meyer-Schlinkmann, K.M., Pischon, T., Rosenkranz, D., Rübsamen, N., Rupp, J., Schäfer, C., Schattschneider, M., Schlegtendal, A., Schlinkert, S., Schmidbauer, L., Schulze-Wundling, K., Störk, S., Tiemann, C., Völzke, H., Winter, T., Klein, C., Liese, J., Brinkmann, F., Ottensmeyer, P.F., Reese, J.P., Heuschmann, P. and Karch, A.
Infection 52 (1): 139-153. February 2024

Artifacts in single-cell mitochondrial DNA mutation analyses misinform phylogenetic inference.
Lareau, C.A., Chapman, M.S., Penter, L., Nawy, T., Pe’er, D. and Ludwig, L.S.
bioRxiv : 2024.07.28.605517v2. 5 October 2024

Liver transcriptome analysis reveals PSC-attributed gene set associated with fibrosis progression.
Laschtowitz, A., Lindberg, E.L., Liebhoff, A.M., Liebig, L.A., Casar, C., Steinmann, S., Guillot, A., Xu, J., Schwinge, D., Trauner, M., Lohse, A.W., Bonn, S., Hübner, N. and Schramm, C.
JHEP Reports : 101267. 12 November 2024 (In Press)

SARS-CoV-2 neutralization and protection of hamsters via nasal administration of a humanized neutralizing antibody.
Lebedin, M., Petrovsky, N., Tabynov, K., Tabynov, K. and Lebedin, Y.
bioRxiv : 2024.07.08.602557. 8 July 2024

Diversification of antibodies: from V(D)J recombination to somatic exon shuffling.
Lebedin, M. and de la Rosa, K.
Annual Review of Cell and Developmental Biology 40 (1): 265-281. October 2024

Soluble ACE2 correlates with severe COVID-19 and can impair antibody responses.
Lebedin, M., Ratswohl, C., Garg, A., Schips, M., Vazquez Garcia, C., Spatt, L., Thibeault, C., Obermayer, B., Weiner, J., Moreno Velásquez, I., Gerhard, C., Stubbemann, P., Hanitsch, L.G., Pischon, T., Witzenrath, M., Sander, L.E., Kurth, F., Meyer-Hermann, M. and de la Rosa, K.
iScience 27 (3): 109330. 15 March 2024

Novel tryptophan hydroxylase inhibitor TPT-001 reverses PAH, vascular remodeling, and proliferative-proinflammatory gene expression.
Legchenko, E., Chouvarine, P., Qadri, F., Specker, E., Nazaré, M., Wesolowski, R., Matthes, S., Bader, M. and Hansmann, G.
JACC: Basic to Translational Science 9 (7): 890-902. July 2024

Spatial single cell profiling using imaging mass cytometry: inflammatory versus penetrating Crohn's disease.
Lehmann, M., Weixler, B., Elezkurtaj, S., Loddenkemper, C., Kühl, A.A. and Siegmund, B.
Journal of Crohn's & Colitis 18 (8): 1305-1318. August 2024

Blocking glycosphingolipid production alters autophagy in osteoclasts and improves myeloma bone disease.
Leng, H., Simon, A.K. and Horwood, N.J.
Autophagy 20 (4): 930-932. April 2024

Single-cell multiomics analysis reveals dynamic clonal evolution and targetable phenotypes in acute myeloid leukemia with complex karyotype.
Leppä, A.M., Grimes, K., Jeong, H., Huang, F.Y., Andrades, A., Waclawiczek, A., Boch, T., Jauch, A., Renders, S., Stelmach, P., Müller-Tidow, C., Karpova, D., Sohn, M., Grünschläger, F., Hasenfeld, P., Benito Garagorri, E., Thiel, V., Dolnik, A., Rodriguez-Martin, B., Bullinger, L., Mrózek, K., Eisfeld, A.K., Krämer, A., Sanders, A.D., Korbel, J.O. and Trumpp, A.
Nature Genetics 56 (12): 2790-2803. December 2024

The cellular representation of temperature across the somatosensory thalamus.
Leva, T., Whitmire, C., Sauve, I., Bokiniec, P., Memler, C., Horn, B., Vestergaard, M., Carta, M. and Poulet, J.F.A.
bioRxiv : 2024.02.13.580167v2. 27 March 2024

mTORC1 regulates cell survival under glucose starvation through 4EBP1/2-mediated translational reprogramming of fatty acid metabolism.
Levy, T., Voeltzke, K., Hruby, L., Alasad, K., Bas, Z., Snaebjörnsson, M., Marciano, R., Scharov, K., Planque, M., Vriens, K., Christen, S., Funk, C.M., Hassiepen, C., Kahler, A., Heider, B., Picard, D., Lim, J.K.M., Stefanski, A., Bendrin, K., Vargas-Toscano, A., Kahlert, U.D., Stühler, K., Remke, M., Elkabets, M., Grünewald, T.G.P., Reichert, A.S., Fendt, S.M., Schulze, A., Reifenberger, G., Rotblat, B. and Leprivier, G.
Nature Communications 15 (1): 4083. 14 May 2024

Solving the inverse problem of microscopy deconvolution with a residual Beylkin-Coifman-Rokhlin neural network.
Li, R., Kudryashev, M. and Yakimovich, A.
Lecture Notes in Computer Science 15133 : 378-395. 1 November 2024

Denoising, deblurring, and optical deconvolution for cryo-ET and light microscopy with a physics-informed deep neural network DeBCR.
Li, R., Yushkevich, A., Chu, X., Kudryashev, M. and Yakimovich, A.
bioRxiv : 2024.07.12.603278. 16 July 2024

Expansion and precise CRISPR-Cas9 gene repair of autologous T memory stem cells from patients with T cell immunodeficiencies.
Li, X., Chu, V.T., Kocks, C. and Rajewsky, K.
Bio-protocol 14 (20): e5085. 20 October 2024

Reliable off-resonance correction in high-field cardiac MRI using autonomous cardiac B0 segmentation with dual-modality deep neural networks.
Li, X., Huang, Y., Malagi, A., Yang, C.C., Yoosefian, G., Huang, L.T., Tang, E., Gao, C., Han, Fei, Bi, X., Ku, M.C., Yang, H.J. and Han, H.
Bioengineering 11 (3): 210. 23 February 2024

Precise CRISPR-Cas9 gene repair in autologous memory T cells to treat familial hemophagocytic lymphohistiocytosis.
Li, X., Wirtz, T., Weber, T., Lebedin, M., Lowenstein, E.D., Sommermann, T., Zach, A., Yasuda, T., de la Rosa, K., Chu, V.T., Schulte, J.H., Müller, I., Kocks, C. and Rajewsky, K.
Science Immunology 9 (92): eadi0042. 2 February 2024

Converting PROMIS®-29 v2.0 profile data to SF-36 physical and mental component summary scores in patients with cardiovascular disorders.
Liegl, G., Fischer, F.H., Martin, C.N., Rönnefarth, M., Blumrich, A., Ahmadi, M., Boldt, L.H., Eckardt, K.U., Endres, M., Edelmann, F., Gerhardt, H., Grittner, U., Haghikia, A., Hübner, N., Landmesser, U., Leistner, D., Mai, K., Kollmus-Heege, J., Müller, D.N., Nolte, C.H., Piper, S.K., Schmidt-Ott, K.M., Pischon, T., Rattan, S., Rohrpasser-Napierkowski, Ira, Schönrath, K., Schulz-Menger, J., Schweizerhof, O., Spranger, J., Weber, J.E., Witzenrath, M., Schmidt, S. and Rose, M.
Health and Quality of Life Outcomes 22 (1): 64. 15 August 2024

Interactions of optic radiation lesions with retinal and brain atrophy in early multiple sclerosis.
Lin, T.Y., Chien, C., Kuchling, J., Asseyer, S., Motamedi, S., Bellmann-Strobl, J., Schmitz-Hübsch, T., Ruprecht, K., Brandt, A.U., Zimmermann, H.G. and Paul, F.
Annals of Clinical and Translational Neurology 11 (1): 45-56. January 2024

Individual prognostication of disease activity and disability worsening in multiple sclerosis with retinal layer thickness z scores.
Lin, T.Y., Motamedi, S., Asseyer, S., Chien, C., Saidha, S., Calabresi, P.A., Fitzgerald, K.C., Samadzadeh, S., Villoslada, P., Llufriu, S., Green, A.J., Preiningerova, J.L., Petzold, A., Leocani, L., Garcia-Martin, E., Oreja-Guevara, C., Outteryck, O., Vermersch, P., Balcer, L.J., Kenney, R., Albrecht, P., Aktas, O., Costello, F., Frederiksen, J., Uccelli, A., Cellerino, M., Frohman, E.M., Frohman, T.C., Bellmann-Strobl, J., Schmitz-Hübsch, T., Ruprecht, K., Brandt, A.U., Zimmermann, H.G. and Paul, F.
Neurology Neuroimmunology & Neuroinflammation 11 (5): e200269. September 2024

Effective inhibitor removal from wastewater samples increases sensitivity of RT-dPCR and sequencing analyses and enhances the stability of wastewater-based surveillance.
Linzner, N., Bartel, A., Schumacher, V., Grau, J.H., Wyler, E., Preuß, H., Garske, S., Bitzegeio, J., Kirst, E.B., Liere, K., Hoppe, S., Borodina, T.A., Altmüller, J., Landthaler, M., Meixner, M., Sagebiel, D. and Böckelmann, U.
Microorganisms 12 (12): 2475. December 2024

Mutant huntingtin impairs neurodevelopment in human brain organoids through CHCHD2-mediated neurometabolic failure.
Lisowski, P., Lickfett, S., Rybak-Wolf, A., Menacho, C., Le, S., Pentimalli, T.M., Notopoulou, S., Dykstra, W., Oehler, D., López-Calcerrada, S., Mlody, B., Otto, M., Wu, H., Richter, Y., Roth, P., Anand, R., Kulka, L.A.M., Meierhofer, D., Glazar, P., Legnini, I., Telugu, N.S., Hahn, T., Neuendorf, N., Miller, D.C., Böddrich, A., Polzin, A., Mayatepek, E., Diecke, S., Olzscha, H., Kirstein, J., Ugalde, C., Petrakis, S., Cambridge, S., Rajewsky, N., Kühn, R., Wanker, E.E., Priller, J., Metzger, J.J. and Prigione, A.
Nature Communications 15 (1): 7027. 22 August 2024

Incomplete transcriptional dosage compensation of chicken and platypus sex chromosomes is balanced by post-transcriptional compensation.
Lister, N.C., Milton, A.M., Patel, H.R., Waters, S.A., Hanrahan, B.J., McIntyre, K.L., Livernois, A.M., Horspool, W.B., Wee, L.K., Ringel, A.R., Mundlos, S., Robson, M.I., Shearwin-Whyatt, L., Grützner, F., Graves, J.A.M., Ruiz-Herrera, A. and Waters, P.D.
Proceedings of the National Academy of Sciences of the United States of America 121 (32): e2322360121. 6 August 2024

Quantification of multi-compartment flow with spectral diffusion MRI.
Liu, M.M., Dyke, J., Gladytz, T., Jasse, J., Bolger, I., Calle, S., Pavaluri, S., Crews, T., Seshan, S., Salvatore, S., Stillman, I., Muthukuma, T., Taouli, B., Farouk, S., Lewis, S. and Bane, O.
arXiv : 2408.06427. 12 August 2024

The role of glycocalyx diversity and thickness for nanoparticle internalization in M1-/M2-like macrophages.
Liu, Y., He, Y., Xu, H., Remmo, A., Wiekhorst, F., Heymann, F., Liu, H., Schellenberger, E., Häckel, A., Hauptmann, R., Taupitz, M., Shen, Y., Yilmaz, E.Y., Müller, D.N., Heidemann, L., Schmidt, R. and Savic, L.J.
Nano Letters 24 (49): 15607-15614. 11 December 2024

CD19-targeting CAR T cells protect from ANCA-induced acute kidney injury.
Lodka, D., Zschummel, M., Bunse, M., Rousselle, A., Sonnemann, J., Kettritz, R., Höpken, U.E. and Schreiber, A.
Annals of the Rheumatic Diseases 83 (4): 499-507. 12 March 2024

Characterization of anthracycline-induced cardiotoxicity by diffusion tensor magnetic resonance imaging.
Lohr, D., Thiele, A., Stahnke, M., Braun, V.M., Klopfleisch, R., Klein, O., Dresen, S., Landmesser, U., Foryst-Ludwig, A., Kintscher, U., Schreiber, L.M. and Beyhoff, N.
Basic Research in Cardiology 14 March 2024 (In Press)

Molecular characterization of nodose ganglia development reveals a novel population of Phox2b+ glial progenitors in mice.
Lowenstein, E.D., Misios, A., Buchert, S. and Ruffault, P.L.
Journal of Neuroscience 44 (28): e1441232024. 10 July 2024

Personal genetic-hypertension odyssey from phenotypes to genotypes and targets.
Luft, F.C.
Hypertension 81 (12): 2395-2406. December 2024

Calcineurin inhibition, cardiovascular consequences, vascular resistance, and potential responses.
Luft, F.C.
Acta Physiologica 240 (3): e14084. March 2024

Canonical and non-canonical integrin-based adhesions dynamically interconvert.
Lukas, F., Matthaeus, C., López-Hernández, T., Lahmann, I., Schultz, N., Lehmann, M., Puchkov, D., Pielage, J., Haucke, V. and Maritzen, T.
Nature Communications 15 (1): 2093. 7 March 2024

Taste mapping: navigating the spatiotemporal link between diet and colorectal cancer.
Luo, Q., Liu, Y., Bi, M., Kuai, X., Tian, Q., Sun, Y. and Zhuang, S.
IEEE Access 12 : 17735 - 17747. 30 January 2024

Marsupial genomes reveal how a skin membrane for gliding evolved.
Lupiáñez, D.G.
Nature 629 (8010): 43-44. 2 May 2024

Multiple myeloma long-term survivors exhibit sustained immune alterations decades after first-line therapy.
Lutz, R., Grünschläger, F., Simon, M., Awwad, M.H.S., Bauer, M., Yousefian, S., Beumer, N., Jopp-Saile, L., Sedlmeier, A., Solé-Boldo, L., Avanesyan, B., Vonficht, D., Stelmach, P., Steinbuss, G., Boch, T., Steiger, S., Baertsch, M.A., Prokoph, N., Rippe, K., Durie, B.G.M., Wickenhauser, C., Trumpp, A., Müller-Tidow, C., Hübschmann, D., Weinhold, N., Raab, M.S., Brors, B., Goldschmidt, H., Imbusch, C.D., Hundemer, M. and Haas, S.
Nature Communications 15 (1): 10396. 29 November 2024

Longevity biotechnology: bridging AI, biomarkers, geroscience and clinical applications for healthy longevity.
Lyu, Y.X., Fu, Q., Wilczok, D., Ying, K., King, A., Antebi, A., Vojta, A., Stolzing, A., Moskalev, A., Georgievskaya, A., Maier, A.B., Olsen, A., Groth, A., Simon, A.K., Brunet, A., Jamil, A., Kulaga, A., Bhatti, A., Yaden, B., Pedersen, B.K., Schumacher, B., Djordjevic, B., Kennedy, B., Chen, C., Huang, C.Y., Correll, C.U., Murphy, C.T., Ewald, C.Y., Chen, D., Valenzano, D.R., Sołdacki, D., Erritzoe, D., Meyer, D., Sinclair, D.A., Chini, E.N., Teeling, E.C., Morgen, E., Verdin, E., Vernet, E., Pinilla, E., Fang, E.F., Bischof, E., Mercken, E.M., Finger, F., Kuipers, F., Pun, F.W., Gyülveszi, G., Civiletto, G., Zmudze, G., Blander, G., Pincus, H.A., McClure, J., Kirkland, J.L., Peyer, J., Justice, J.N., Vijg, J., Gruhn, J.R., McLaughlin, J., Mannick, J., Passos, J., Baur, J.A., Betts-LaCroix, J., Sedivy, J.M., Speakman, J.R., Shlain, J., von Maltzahn, J., Andreasson, K.I., Moody, K., Palikaras, K., Fortney, K., Niedernhofer, L.J., Rasmussen, L.J., Veenhoff, L.M., Melton, L., Ferrucci, L., Quarta, M., Koval, M., Marinova, M., Hamalainen, M., Unfried, M., Ringel, M.S., Filipovic, M., Topors, M., Mitin, N., Roy, N., Pintar, N., Barzilai, N., Binetti, P., Singh, P., Kohlhaas, P., Robbins, P.D., Rubin, P., Fedichev, P.O., Kamya, P., Muñoz-Canoves, P., de Cabo, R., Faragher, R.G.A., Konrad, R., Ripa, R., Mansukhani, R., Büttner, S., Wickström, S.A., Brunemeier, S., Jakimov, S., Luo, S., Rosenzweig-Lipson, S., Tsai, S.Y., Dimmeler, S., Rando, T.A., Peterson, T.R., Woods, T., Wyss-Coray, T., Finkel, T., Strauss, T., Gladyshev, V.N., Longo, V.D., Dwaraka, V.B., Gorbunova, V., Acosta-Rodríguez, V.A., Sorrentino, V., Sebastiano, V., Li, W., Suh, Y., Zhavoronkov, A., Scheibye-Knudsen, M. and Bakula, D.
Aging 16 (20): 12955-12976. 31 October 2024

Promising results of a clinical feasibility study: CIRBP as a potential biomarker in pediatric cardiac surgery.
Lücht, J., Seiler, R., Herre, A.L., Brankova, L., Fritsche-Guenther, R., Kirwan, J., Huscher, D., Münzfeld, H., Berger, F., Photiadis, J., Tong, G. and Schmitt, K.R.L.
Frontiers in Cardiovascular Medicine 11 : 1247472. 1 February 2024

M

Metrics reloaded: recommendations for image analysis validation.
Maier-Hein, L., Reinke, A., Godau, P., Tizabi, M.D., Buettner, F., Christodoulou, E., Glocker, B., Isensee, F., Kleesiek, J., Kozubek, M., Reyes, M., Riegler, M.A., Wiesenfarth, M., Kavur, A.E., Sudre, C.H., Baumgartner, M., Eisenmann, M., Heckmann-Nötzel, D., Rädsch, T., Acion, L., Antonelli, M., Arbel, T., Bakas, S., Benis, A., Blaschko, M.B., Cardoso, M.J., Cheplygina, V., Cimini, B.A., Collins, G.S., Farahani, K., Ferrer, L., Galdran, A., van Ginneken, B., Haase, R., Hashimoto, D.A., Hoffman, M.M., Huisman, M., Jannin, P., Kahn, C.E., Kainmueller, D., Kainz, B., Karargyris, A., Karthikesalingam, A., Kofler, F., Kopp-Schneider, A., Kreshuk, A., Kurc, T., Landman, B.A., Litjens, G., Madani, A., Maier-Hein, K., Martel, A.L., Mattson, P., Meijering, E., Menze, B., Moons, K.G.M., Müller, H., Nichyporuk, B., Nickel, F., Petersen, J., Rajpoot, N., Rieke, N., Saez-Rodriguez, J., Sánchez, C.I., Shetty, S., van Smeden, M., Summers, R.M., Taha, A.A., Tiulpin, A., Tsaftaris, S.A., Van Calster, B., Varoquaux, G. and Jäger, P.F.
Nature Methods 21 (2): 195-212. 12 February 2024

FISBe: a real-world benchmark dataset for instance segmentation of long-range thin filamentous structures.
Mais, L., Hirsch, P., Managan, Claire, Kandarpa, Ramya, Rumberger, J.L., Reinke, Annika, Maier-Hein, Lena, Ihrke, Gudrun and Kainmueller, D.
In: 2024 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), 16-22 June 2024, Seattle, WA, USA. 16 September 2024

Canonical and non-canonical localization of tight junction proteins during early murine cranial development.
Mak, S. and Hammes, A.
International Journal of Molecular Sciences 25 (3): 1426. 24 January 2024

An automated and fast sample preparation workflow for laser microdissection guided ultrasensitive proteomics.
Makhmut, A., Qin, D., Hartlmayr, D., Seth, A. and Coscia, F.
Molecular & Cellular Proteomics 23 (5): 100750. May 2024

Single-cell multi-omics analysis identifies context-specific gene regulatory gates and mechanisms.
Malekpour, S.A., Haghverdi, L. and Sadeghi, M.
Briefings in Bioinformatics 25 (3): bbae180. May 2024

Impact of training data composition on the generalizability of convolutional neural network aortic cross-section segmentation in four-dimensional magnetic resonance flow imaging.
Manini, C., Hüllebrand, M., Walczak, L., Nordmeyer, S., Jarmatz, L., Kuehne, T., Stern, H., Meierhofer, C., Harloff, A., Erley, J., Kelle, S., Bannas, P., Trauzeddel, R.F., Schulz-Menger, J. and Hennemuth, A.
Journal of Cardiovascular Magnetic Resonance 26 (2): 101081. 8 August 2024

A simulation-based phantom model for generating synthetic mitral valve image data-application to MRI acquisition planning.
Manini, C., Nemchyna, O., Akansel, S., Walczak, L., Tautz, L., Kolbitsch, C., Falk, V., Sündermann, S., Kühne, T., Schulz-Menger, J. and Hennemuth, A.
International Journal of Computer Assisted Radiology and Surgery 19 (3): 553-569. March 2024

Der Stellenwert funktioneller Outcome-Parameter des afferent visuellen Systems bei neuroinflammatorischen Erkrankungen [The significance of functional outcome parameters of the afferent visual system in neuroinflammatory disorders].
Manthey, L.M., Buenrostro, G.S., Paul, F. and Oertel, F.C.
Klinische Neurophysiologie 55 (03): 147-152. September 2024

Cerebral small vessel disease may not critically influence familial Parkinson’s disease.
Marhat, B., Bimala, M., Foddis, M., Holtgrewe, M., Beule, D., Bras, J., Guerreiro, R., Kola, V., Schmitt, H.M., Endres, M. and Sassi, C.
Research Square : rs.3.rs-4518069. 26 June 2024

Structure-based humanization of a therapeutic antibody for multiple myeloma.
Marino, S.F. and Daumke, O.
Journal of Molecular Medicine 102 (9): 1151-1161. September 2024

Differences in discounting behavior and brain responses for food and money reward.
Markman, M., Saruco, E., Al-Bas, S., Wang, B.A., Rose, J., Ohla, K., Xue Li Lim, S., Schicker, D., Freiherr, J., Weygandt, M., Rramani, Q., Weber, B., Schultz, J. and Pleger, B.
eNeuro 11 (4): ENEURO.0153-23.2024. April 2024

Identifying cancer cells from calling single-nucleotide variants in scRNA-seq data.
Marot-Lassauzaie, V., Beneyto-Calabuig, S., Obermayer, B., Velten, L., Beule, D. and Haghverdi, L.
Bioinformatics 40 (9): btae512. September 2024

Water conservation overrides osmotic diuresis during SGLT2 inhibition in patients with heart failure.
Marton, A., Saffari, S.E., Rauh, M., Sun, R.N., Nagel, A.M., Linz, P., Lim, T.T., Takase-Minegishi, K., Pajarillaga, A., Saw, S., Morisawa, N., Yam, W.K., Minegishi, S., Totman, J.J., Teo, S., Teo, L.L.Y., Ng, C.T., Kitada, K., Wild, J., Kovalik, J.P., Luft, F.C., Greasley, P.J., Chin, C.W.L., Sim, D.K.L. and Titze, J.
Journal of the American College of Cardiology 83 (15): 1386-1398. 16 April 2024

Microglial lipid phosphatase SHIP1 limits complement-mediated synaptic pruning in the healthy developing hippocampus.
Matera, A., Compagnion, A.C., Pedicone, C., Janssen, M.K., Ivanov, A., Monsorno, K., Labouèbe, G., Leggio, L., Pereira, M., Beule, D., Mansuy-Aubert, V., Williams, T.L., Iraci, N., Sierra, A., Marro, S.G., Goate, A.M., Eggen, B.L., Kerr, W.G. and Paolicelli, R.C.
Immunity 9 December 2024 (In Press)

Despite the odds: formation of the SARS-CoV-2 methylation complex.
Matsuda, A., Plewka, J., Rawski, M., Mourão, A., Zajko, W., Siebenmorgen, T., Kresik, L., Lis, K., Jones, A.N., Pachota, M., Karim, A., Hartman, K., Nirwal, S., Sonani, R., Chykunova, Y., Minia, I., Mak, P., Landthaler, M., Nowotny, M., Dubin, G., Sattler, M., Suder, P., Popowicz, G.M., Pyrć, K. and Czarna, A.
Nucleic Acids Research 52 (11): 6441-6458. 24 June 2024

Microglia undergo molecular and functional adaptations to dark and light phases in male laboratory mice.
Mattei, D., Ivanov, A., Hammer, J., Ugursu, B., Schalbetter, S., Richetto, J., Weber-Stadlbauer, U., Mueller, F., Scarborough, J., Wolf, S.A., Kettenmann, H., Wollscheid, B., Beule, D. and Meyer, U.
Brain, Behavior and Immunity 210 : 571-583. August 2024

Hypertrophic obstructive cardiomyopathy-left ventricular outflow tract shapes and their hemodynamic influences applying CMR.
Mayr, T., Riazy, L., Trauzeddel, R.F., Bassenge, J.P., Wiesemann, S., Blaszczyk, E., Prothmann, M., Hadler, T., Schmitter, S. and Schulz-Menger, J.
International Journal of Cardiovascular Imaging 40 (11): 2371-2381. November 2024

Structure-based mapping of the histone-binding pocket of KDM4D using functionalized tetrazole and pyridine core compounds.
Małecki, P.H., Fassauer, G.M., Rüger, N., Schulig, L., Link, A., Krylova, O., Heinemann, U. and Weiss, M.S.
European Journal of Medicinal Chemistry 276 : 116642. 5 October 2024

Women in Autophagy: an initiative to promote gender parity in science.
McCabe, M., Boya, P., Chen, R.H., Chu, C.T., Colombo, M.I., Delgui, L., Eskelinen, E.L., Hamasaki, M., Hansen, M., He, C., Jäättelä, M., Kimchi, A., Kraft, C., Kundu, M., Melendez, A., Pattingre, S., Proikas-Cezanne, T., Sebti, S., Simon, A.K., Simonsen, A., Tooze, S.A., Vaccaro, M.I., Wang, X., White, E., Zhao, Y. and Cuervo, A.M.
Nature Cell Biology 26 (12): 2009-2012. December 2024

Ongoing genome doubling promotes evolvability and immune dysregulation in ovarian cancer.
McPherson, A.W., Vázquez-Garcia, I., Myers, M.A., Zatzman, M., Al-Rawi, D.H., Weiner, A.C., Freeman, S.S., Mohibullah, N., Satas, G., Williams, M.J., Ceglia, N., Zhang, A.W., Li, J., Lim, J.L.P., Wu, M., Choi, S., Havasov, E., Grewal, D., Shi, H., Kim, M., Schwarz, R.F., Kaufmann (Ohler), T.L., Dinh, K.N., Uhlitz, F., Tran, J., Wu, Y., Patel, R., Ramakrishnan, S., Kim, D., Clarke, J., Green, H., Ali, E., DiBona, M., Varice, N., Kundra, R., Broach, V., Gardner, G.J., Long Roche, K., Sonoda, Y., Zivanovic, O., Kim, S.H., Grisham, R.N., Liu, Y.L., Viale, A., Rusk, N., Lakhman, Y., Ellenson, L.H., Tavare, S., Aparicio, S.A.J.R., Chi, D.S., Aghajanian, C., Abu-Rustum, N.R., Friedman, C.F., Bakhoum, S.F., Zamarin, D., Weigelt, B. and Shah, S.P.
bioRxiv : 2024.07.11.602772v2. 15 July 2024

Kommentar zu den Leitlinien 2023 der ESC zum Management von Kardiomyopathien.
Meder, B., Eckardt, L., Falk, V., Klaassen, S., Klingenheben, T., Knebel, F., Schulze-Bahr, E. and Schulz-Menger, J.
Kardiologie 9 April 2024

External mechanical stability regulates hematoma vascularization in bone healing rather than endothelial YAP/TAZ mechanotransduction.
Mehl, J., Farahani, S.K., Brauer, E., Klaus-Bergmann, A., Thiele, T., Ellinghaus, A., Bartels-Klein, E., Koch, K., Schmidt-Bleek, K., Petersen, A., Gerhardt, H., Vogel, V. and Duda, G.N.
Advanced Science 11 (13): e2307050. 3 April 2024

Deep learning-driven neuromorphogenesis screenings identify repurposable drugs for mitochondrial disease.
Menacho, C., Okawa, S., Alvarez-Merz, I., Wittich, A., Muñoz-Oreja, M., Lisowski, P., Pentimalli, T.M., Rybak-Wolf, A., Inak, G., Zakin, S., Thevandavakkam, M., Petersilie, L., Zaliani, A., Mlody, B., Seibt, A., Donnelly, J., Woleben, K., Fernandez-Checa, J., Herebian, D., Mayatepek, E., Rajewsky, N., Spinazzola, A., Schuelke, M., Perlstein, E., Rossi, A., Distelmaier, F., Holt, I.J., Pless, O., Rose, C., Del Sol, A. and Prigione, A.
bioRxiv : 2024.07.08.602501. 12 July 2024

CD3 aptamers promote expansion and persistence of tumor-reactive T cells for adoptive T cell therapy in cancer.
Menon, A.P., Villanueva, H., Meraviglia-Crivelli, D., van Santen, H.M., Hellmeier, J., Zheleva, A., Nonateli, F., Peters, T., Wachsmann, T.L.A., Hernandez-Rueda, M., Huppa, J.B., Schütz, G.J., Sevcsik, E., Moreno, B. and Pastor, F.
Molecular Therapy Nucleic Acids 35 (2): 102198. 11 June 2024

Benchmarking whole exome sequencing in the German network for personalized medicine.
Menzel, M., Martis-Thiele, M., Goldschmid, H., Ott, A., Romanovsky, E., Siemanowski-Hrach, J., Seillier, L., Brüchle, N.O., Maurer, A., Lehmann, K.V., Begemann, M., Elbracht, M., Meyer, R., Dintner, S., Claus, R., Meier-Kolthoff, J.P, Blanc, E., Möbs, M., Joosten, M., Benary, M., Basitta, P., Hölscher, F., Tischler, V., Groß, T., Kutz, O., Prause, R., William, D., Horny, Kai, Goering, W., Sivalingam, S., Borkhardt, A., Blank, C., Junk, S.V., Yasin, L., Moskalev, E.A., Carta, M.G., Ferrazzi, F., Tögel, L., Wolter, S., Adam, E., Matysiak, U., Rosenthal, T., Dönitz, J., Lehmann, U., Schmidt, G., Bartels, S., Hofmann, W., Hirsch, S., Dikow, N., Göbel, K., Banan, R., Hamelmann, S., Fink, A., Ball, M., Neumann, O., Rehker, J., Kloth, M., Murtagh, J., Hartmann, N., Jurmeister, P., Mock, A., Kumbrink, J., Jung, A., Mayr, E.M., Jacob, A., Trautmann, M., Kirmse, S., Falkenberg, K., Ruckert, C., Hirsch, D., Immel, A., Dietmaier, W., Haack, T., Marienfeld, R., Fürstberger, A., Niewöhner, J., Gerstenmaier, U., Eberhardt, T., Greif, P.A., Appenzeller, S., Maurus, K., Doll, J., Jelting, Y., Jonigk, D., Märkl, B., Beule, D., Horst, D., Wulf, A.L., Aust, D., Werner, M., Reuter-Jessen, K., Ströbel, P., Auber, B., Sahm, F., Merkelbach-Bruse, S., Siebolts, U., Roth, W., Lassmann, S., Klauschen, F., Gaisa, N.T., Weichert, W., Evert, M., Armeanu-Ebinger, S., Ossowski, S., Schroeder, C., Schaaf, C.P., Malek, N., Schirmacher, P., Kazdal, D., Pfarr, N., Budczies, J. and Stenzinger, A.
European Journal of Cancer 211 : 114306. November 2024

MarShie: a clearing protocol for 3D analysis of single cells throughout the bone marrow at subcellular resolution.
Mertens, T.F., Liebheit, A.T., Ehl, J., Köhler, R., Rakhymzhan, A., Woehler, A., Katthän, L., Ebel, G., Liublin, W., Kasapi, A., Triantafyllopoulou, A., Schulz, T.J., Niesner, R.A. and Hauser, A.E.
Nature Communications 15 (1): 1764. 26 February 2024

Imlifidase – ein innovativer Therapieansatz in der Nephrologie [Imlifidase - an innovative treatment approach in nephrology].
Mestekemper, A.N. and Schreiber, A.
Nephrologie 19 : 248–251. July 2024

A single-dose MCMV-based vaccine elicits long-lasting immune protection in mice against distinct SARS-CoV-2 variants.
Metzdorf, K., Jacobsen, H., Kim, Y., Teixeira Alves, L.G., Kulkarni, U., Brdovčak, M.C., Materljan, J., Eschke, K., Chaudhry, M.Z., Hoffmann, M., Bertoglio, F., Ruschig, M., Hust, M., Šustić, M., Krmpotić, A., Jonjić, S., Widera, M., Ciesek, S., Pöhlmann, S., Landthaler, M. and Čičin-Šain, L.
Frontiers in Immunology 15 : 1383086. 25 July 2024

Magnetic resonance elastography in a nutshell: Tomographic imaging of soft tissue viscoelasticity for detecting and staging disease with a focus on inflammation.
Meyer, T., Castelein, J., Schattenfroh, J., Morr, A.S., Vieira da Silva, R., Tzschätzsch, H., Reiter, R., Guo, J. and Sack, I.
Progress in Nuclear Magnetic Resonance Spectroscopy 144-145 : 1-14. November 2024

Body mass, neuro-hormonal stress processing, and disease activity in lean to obese people with multiple sclerosis.
Meyer-Arndt, L., Brasanac, J., Gamradt, S., Bellmann-Strobl, J., Maurer, L., Mai, K., Steward, T., Spranger, J., Schmitz-Hübsch, T., Paul, F., Gold, S.M. and Weygandt, M.
Journal of Neurology 271 (4): 1584-1598. April 2024

Likelihood of post-COVID condition in people with hybrid immunity; data from the German National Cohort (NAKO).
Mikolajczyk, R., Diexer, S., Klee, B., Pfrommer, L., Purschke, O., Fricke, J., Ahnert, P., Gabrysch, S., Gottschick, C., Bohn, B., Brenner, H., Buck, C., Castell, S., Gastell, S., Greiser, K.H., Harth, V., Heise, J.K., Holleczek, B., Kaaks, R., Keil, T., Krist, L., Leitzmann, M., Lieb, W., Meinke-Franze, Cl., Michels, K.B., Moreno Velásquez, I., Obi, N., Panreck, L., Peters, A., Pischon, T., Schikowski, T., Schmidt, B., Standl, M., Stang, A., Völzke, H., Weber, A., Zeeb, H. and Karch, A.
Journal of Infection 89 (2): 106206. August 2024

Dissecting the spatiotemporal diversity of adult neural stem cells.
Mitic, N., Neuschulz, A., Spanjaard, B., Schneider, J., Fresmann, N., Novoselc, K.T., Strunk, T., Münster, L., Olivares-Chauvet, P., Ninkovic, J. and Junker, J.P.
Molecular Systems Biology 20 (4): 321-337. 2 April 2024

Sodium as an important regulator of immunometabolism.
Miyauchi, H., Geisberger, S., Luft, F.C., Wilck, N., Stegbauer, J., Wiig, H., Dechend, R., Jantsch, J., Kleinewietfeld, M., Kempa, S. and Mueller, D.N.
Hypertension 81 (3): 426-435. March 2024

Oligodendrocyte-derived LGI3 and its receptor ADAM23 organize juxtaparanodal Kv1 channel clustering for short-term synaptic plasticity.
Miyazaki, Y., Otsuka, T., Yamagata, Y., Endo, T., Sanbo, M., Sano, H., Kobayashi, K., Inahashi, H., Kornau, H.C., Schmitz, D., Prüss, H., Meijer, D., Hirabayashi, M., Fukata, Y. and Fukata, M.
Cell Reports 43 (1): 113634. 23 January 2024

Glycolysis–Wnt signaling axis tunes developmental timing of embryo segmentation.
Miyazawa, H., Rada, J., Sanchez, P.G.L., Esposito, E., Bunina, D., Girardot, C., Zaugg, J. and Aulehla, A.
bioRxiv : 2024.01.22.576629v2. 23 January 2024

The association of pre-operative biomarkers of endothelial dysfunction with the risk of post-operative neurocognitive disorders: results from the BioCog study.
Moazzen, S., Janke, J., Slooter, A.J.C., Winterer, G., Spies, C., Pischon, T. and Feinkohl, I.
BMC Anesthesiology 24 (1): 358. 8 October 2024

Disruption of basal CXCR4 oligomers impairs oncogenic properties in lymphoid neoplasms.
Mobach, S, Bergkamp, N.D., Ma, Z, Haselager, M.V., Anbuhl, S.M., Jurriens, D, van den Bor, J., Wang, Z., Crudden, C., Roos, J.L., Perez Almeria, C.V., Boergonje, R.A., Lohse, M.J., Bosma, R., Eldering, E., Siderius, M., Wu, W., Spaargaren, M., Tonino, S.H., Kater, A.P., Smit, M.J. and Heukers, R.
bioRxiv : 2024.12.06.627249. 7 December 2024

Proteomic profiling reveals ACSS2 facilitating metabolic support in acute myeloid leukemia.
Mochmann, L.H., Treue, D., Bockmayr, M., Silva, P., Zasada, C., Mastrobuoni, G., Bayram, S., Forbes, M., Jurmeister, P., Liebig, S., Blau, O., Schleich, K., Splettstoesser, B., Nordmann, T.M., von der Heide, E.K., Isaakidis, K., Schulze, V., Busch, C., Siddiq, H., Schlee, C., Hester, S., Fransecky, L., Neumann, M., Kempa, S., Klauschen, F. and Baldus, C.D.
Cancer Gene Therapy 31 (9): 1344-1356. September 2024

Impact of the PI3Kalpha inhibitor alpelisib on everolimus resistance and somatostatin receptor expression in an orthotopic pancreatic NEC xenograft mouse model.
Mohan, A.M., Prasad, S., Schmitz-Peiffer, F., Lange, C., Lukas, M., Koziolek, E.J., Albrecht, J., Messroghli, D., Stein, U., Ilmer, M., Wang, K., Schober, L., Reul, A., Maurer, J., Friemel, J., Weber, A., Zuellig, R.A., Hantel, C., Fritsch, R., Reincke, M., Pacak, K., Grossman, A.B., Auernhammer, C.J., Beuschlein, F., Brenner, W., Beindorff, N. and Nölting, S.
Endocrine-Related Cancer 31 (1): e230041. January 2024

Identification of drug-like molecules targeting the ATPase activity of dynamin-like EHD4.
Mohd, S., Oder, A., Specker, E., Neuenschwander, M., von Kries, J.P. and Daumke, O.
PLoS ONE 19 (7): e0302704. 29 July 2024

CXCR4 has a dual role in improving the efficacy of BCMA redirected CAR-NK cells in multiple myeloma.
Moles, M.W., Erdlei, H., Menzel, L., Massaro, M., Fiori, A., Bunse, M., Schrimpf, M., Gerlach, K., Gudipati, V., Reiser, J., Mathavan, K., Goodrich, J., Huppa, J.B., Kroenke, J., Valamehr, B., Höpken, U.E. and Rehm, A.
Frontiers in Immunology 15 : 1383136. 24 June 2024

AHRR and SFRP2 in primary versus recurrent high-grade serous ovarian carcinoma and their prognostic implication.
Monjé, N., Dragomir, M.P., Sinn, B.V., Hoffmann, I., Makhmut, A., Simon, T., Kunze, C.A., Ihlow, J., Schmitt, W.D., Pohl, J., Piwonski, I., Marchenko, S., Keunecke, C., Calina, T.G., Tiso, F., Kulbe, H., Kreuzinger, C., Cacsire Castillo-Tong, D., Sehouli, J., Braicu, E.I., Denkert, C., Darb-Esfahani, S., Kübler, K., Capper, D., Coscia, F., Morkel, M., Horst, D., Sers, C. and Taube, E.T.
British Journal of Cancer 13 (8): 1249-1260. 3 May 2024

The functional impact of LGI1 autoantibodies on human CA3 pyramidal neurons.
Monni, L., Kornau, H.C., Podestà, A., Stumpf, A., Kalbhenn, T., Simon, M., Sauvigny, T., Onken, J., Prüss, H., Alle, H., Geiger, J.R.P., Holtkamp, M., Schmitz, D. and Fidzinski, P.
bioRxiv : 2024.10.28.620296v1. 28 October 2024

Evaluation of polygenic scoring methods in five biobanks shows larger variation between biobanks than methods and finds benefits of ensemble learning.
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American Journal of Human Genetics 111 (7): 1431-1447. 11 July 2024

The contractile machines of the heart.
Morano, I.
Advances in Experimental Medicine and Biology 1441 : 417-433. 18 June 2024

Do low levels of albuminuria predict mortality among young adults without major cardiovascular risk factors?
Moreno Velásquez, I. and Gigante, B.
European Journal of Preventive Cardiology 31 (17): 2056-2057. November 2024

RoCK and ROI: single-cell transcriptomics with multiplexed enrichment of selected transcripts and region-specific sequencing.
Moro, G., Mallona, I., Maillard, J., Brügger, M.D., Fazilaty, H., Szabo, Q., Valenta, T., Handler, K., Kerlin, F., Moor, A.E., Zinzen, R., Robinson, M.D., Brunner, E. and Basler, K.
bioRxiv : 2024.05.18.594120v2. 3 June 2024

The zebrafish heart harbors a thermogenic beige fat depot analog of human epicardial adipose tissue.
Morocho-Jaramillo, P.A., Kotlar-Goldaper, I., Zakarauskas-Seth, B.I., Purfürst, B., Filosa, A. and Sawamiphak, S.
Cell Reports 43 (3): 113955. 26 March 2024

A recent gibbon ape leukemia virus germline integration in a rodent from New Guinea.
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Proceedings of the National Academy of Sciences of the United States of America 121 (6): e2220392121. 1 February 2024

Successful generation of fully human, second generation, anti-CD19 CAR T cells for clinical use in patients with diverse autoimmune disorders.
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Cytotherapy 5 October 2024 (In Press)

Heterozygous missense variant in GLI2 impairs human endocrine pancreas development.
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Nature Communications 15 (1): 2483. 20 March 2024

Natural proteome diversity links aneuploidy tolerance to protein turnover.
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Nature 630 (8015): 149-157. 6 June 2024

MatK impacts differential chloroplast translation by limiting spliced tRNA-K(UUU) abundance.
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Plant Journal 119 (6): 2737-2752. September 2024

Quality assessment by bile composition in normothermic machine perfusion of rat livers.
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Tissue Engineering Part A 4 June 2024 (In Press)

A study protocol to characterise pathophysiological and molecular markers of rheumatic heart disease and degenerative aortic stenosis using multiparametric cardiovascular imaging and multiomics techniques.
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PLoS ONE 19 (5): e0303496. 13 May 2024

Mice with renal-specific alterations 1 of stem cell-associated signaling develop symptoms of chronic kidney disease but surprisingly no tumors.
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PLoS ONE 19 (3): e0282938. 21 March 2024

SPINEPS-automatic whole spine segmentation of T2-weighted MR images using a two-phase approach to multi-class semantic and instance segmentation.
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European Radiology 29 October 2024 (In Press)

Gauging antigen recognition by human primary T-cells featuring orthotopically exchanged TCRs of choice.
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Methods in Cell Biology 15 April 2024 (In Press)

Structure, interaction and nervous connectivity of beta cell primary cilia.
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Nature Communications 15 (1): 9168. 24 October 2024

Inter-site comparability of 4D flow cardiovascular magnetic resonance measurements in healthy traveling volunteers -- a multi-site and multi-magnetic field strength study.
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Frontiers in Cardiovascular Medicine 11 : 1456814. 8 November 2024

Modular segmentation, spatial analysis and visualization of volume electron microscopy datasets.
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Nature Protocols 19 (5): 1436-1466. May 2024

High-throughput anaerobic screening for identifying compounds acting against gut bacteria in monocultures or communities.
Müller, P., de la Cuesta-Zuluaga, J., Kuhn, M., Baghai Arassi, M., Treis, T., Blasche, S., Zimmermann, M., Bork, P., Patil, K.R., Typas, A., Garcia-Santamarina, S. and Maier, L.
Nature Protocols 19 (3): 668-699. March 2024

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Fluorescent tools for the imaging of dopamine D2-like receptors.
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ChemBioChem 25 (2): e202300659. 15 January 2024

Socioeconomic characteristics and the home food environment are associated with feeding healthful and discretionary foods in the first year of life in the Pregnancy Eating Attributes Study.
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Journal of the Academy of Nutrition and Dietetics 2024 (In Press)

μCT imaging of a multi-organ vascular fingerprint in rats.
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PLoS ONE 19 (10): e0308601. 14 October 2024

A new era in neuromuscular junction research: current advances in self-organized and assembled in vitro models.
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ATF4 orchestrates IL-1α-induced senescence in adult neural stem cells.
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bioRxiv : 2024.03.17.585394. 17 March 2024

Greater within- and between-day instability is associated with worse anxiety and depression symptoms.
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Journal of Affective Disorders 326 : 215-223. 1 July 2024

Arginine methylation of the p30 C/EBPα oncoprotein regulates progenitor proliferation and myeloid differentiation.
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iScience 27 (11): 111199. 15 November 2024

MRI of kidney size matters.
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Lebenserwartung.
Nimptsch, K. and Pischon, T.
In: Adipositas: Ätiologie, Folgekrankheiten, Diagnostik, Therapie. Springer, Berlin, Heidelberg, 351-358. ISBN 978-3-662-58894-9 27 July 2024

Pregnancy associated plasma protein-A2 (PAPP-A2) and stanniocalcin-2 (STC2) but not PAPP-A are associated with circulating total IGF-1 in a human adult population.
Nimptsch, K., Aydin, E.E., Chavarria, R.F.R., Janke, J., Poy, M.N., Oxvig, C., Steinbrecher, A. and Pischon, T.
Scientific Reports 14 (1): 1770. 20 January 2024

Epidemiology of obesity.
Nimptsch, K. and Pischon, T.
In: Handbook of eating disorders and obesity. Springer, Berlin, Heidelberg, Germany, 425-430. ISBN 978-3-662-67662-2 25 April 2024

Fecal microbial load is a major determinant of gut microbiome variation and a confounder for disease associations.
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Cell 13 November 2024 (In Press)

Anti-aquaporin-4 immune complex stimulates complement-dependent Th17 cytokine release in neuromyelitis optica spectrum disorders.
Nishiyama, S., Seok, J.M., Wright, A.E., Lotan, I., Mikami, T., Drosu, N.C., Bobrowski-Khoury, N., Anderson, M.R., Bilodeau, P.A., Schindler, P., Paul, F., Aoki, M., Yeaman, M.R. and Levy, M.
Scientific Reports 14 (1): 3146. 7 February 2024

Mitochondrial genetics through the lens of single-cell multi-omics.
Nitsch, L., Lareau, C.A. and Ludwig, L.S.
Nature Genetics 56 (7): 1355-1365. July 2024

Single-stranded HDR templates with truncated Cas12a binding sequences improve knock-in efficiencies in primary human T cells.
Nitulescu, A.M., Du, W., Glaser, V., Kath, J., Greensmith, R., Mikkelsen, N.S., Stein, M., Bak, R., Kaminski, M.M. and Wagner, D.L.
bioRxiv : 2024.09.11.608426. 11 September 2024

Topological reaction coordinate captures the folding transition state ensemble in a pierced lasso protein.
Noel, J.K. and Haglund, E.
Journal of Physical Chemistry B 128 (1): 117-124. 11 January 2024

Genetic characterization of primary mediastinal B-cell lymphoma: pathogenesis and patient outcomes.
Noerenberg, D., Briest, F., Hennch, C., Yoshida, K., Hablesreiter, R., Takeuchi, Y., Ueno, H., Staiger, A.M., Ziepert, M., Asmar, F., Locher, B.N., Toth, E., Weber, T., Amini, R.M., Klapper, W., Bouzani, M., Poeschel, V., Rosenwald, A., Held, G., Campo, E., Ishaque, N., Stamatopoulos, K., Kanellis, G., Anagnostopoulos, I., Bullinger, L., Goldschmidt, N., Zinzani, P.L., Bödör, C., Rosenquist, R., Vassilakopoulos, T.P., Ott, G., Ogawa, S. and Damm, F.
Journal of Clinical Oncology 42 (4): 452-466. 1 February 2024

Senescent syncytiotrophoblast secretion during early onset preeclampsia.
Nonn, O., Debnath, O., Valdes, D.S., Sallinger, K., Secener, A.K., Fischer, C., Tiesmeyer, S., Nimo, J., Kuenzer, T., Ulrich, J., Maxian, T., Knöfler, M., Karau, P., Bartolomaeus, H., Kroneis, T., Frolova, A., Neuper, L., Haase, N., Malt, A., Müller-Bötticher, N., Kräker, K., Kedziora, S., Forstner, D., Eils, R., Schmidt-Ullrich, R., Haider, S., Verlohren, S., Stern, C., Sugulle, M., Jones, S., Thilaganathan, B., Kaitu'u-Lino, T.J., Tong, S., Huppertz, B., El-Heliebi, A., Staff, A.C., Coscia, F., Müller, D.N., Dechend, R., Gauster, M., Ishaque, N. and Herse, F.
Hypertension 23 October 2024 (In Press)

Evaluation of machine learning-based classification of clinical impairment and prediction of clinical worsening in multiple sclerosis.
Noteboom, S., Seiler, M., Chien, C., Rane, R.P., Barkhof, F., Strijbis, E.M.M., Paul, F., Schoonheim, M.M. and Ritter, K.
Journal of Neurology 271 (8): 5577-5589. August 2024

ACE2 knockout mice are resistant to high-fat diet-induced obesity in an age-dependent manner.
Nunes-Souza, V., Alenina, N., Qadri, F., Mosienko, V., Santos, R.A.S., Bader, M. and Rabelo, L.A.
International Journal of Molecular Sciences 25 (17): 9515. 1 September 2024

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Update and European consensus on a patient-centered core outcome set for multiple myeloma in clinical practice and research.
Oerlemans, S., De Rooij, B.H., Bennink, C., Bullinger, L., Broijl, A., D'Agostino, M., Laane, E., Lupo-Stanghellini, M.T., Perrot, A., Wester, R., Cursaru, V., Scheurer, H., Vesseur, J., Dalal, M., Sen, R., Stamm, T., Ludwig, H. and Sonneveld, P.
Haematologica 109 (6): 1956-1959. June 2024

Editorial.
Oertel, F.C.
Klinische Neurophysiologie 55 (03): 133-133. September 2024

Scientific commentary on: “Phosphorylated tau in the retina correlates with tau pathology in the brain in Alzheimer’s disease and primary tauopathies”.
Oertel, F.C., Casillas, D., Cobigo, Y., Condor Montes, S., Heuer, H.W., Chapman, M., Beaudry-Richard, A., Reinsberg, H., Abdelhak, A., Cordano, C., Boeve, B.F., Dickerson, B.C., Grossman, M., Huey, E., Irwin, D.J., Litvan, I., Pantelyat, A., Tartaglia, M.C., Vandevrede, L., Boxer, A. and Green, A.J.
Acta Neuropathologica 147 (1): 30. 3 February 2024

Retinal changes in double-antibody seronegative neuromyelitis optica spectrum disorders.
Oertel, F.C., Zimmermann, H.G., Motamedi, S., Bereuter, C., Manthey, L.M., Ashtari, F., Kafieh, R., Dehghani, A., Pourazizi, M., Pandit, L., D'Cunha, A., Aktas, O., Albrecht, P., Ringelstein, M., Martinez-Lapiscina, E.H., Sanchez Dalmau, B.F., Villoslada, P., Asgari, N., Marignier, R., Cobo-Calvo, A., Leocani, L., Pisa, M., Radaelli, M., Palace, J., Roca-Fernandez, A., Leite, M.I.S., Sharma, S., De Seze, J., Senger, T., Yeaman, M.R., Smith, T.J., Cook, L.J., Brandt, A.U. and Paul, F.
Neurology Neuroimmunology & Neuroinflammation 11 (5): e200273. September 2024

Sensory Schwann cells set perceptual thresholds for touch and selectively regulate mechanical nociception.
Ojeda-Alonso, J., Calvo-Enrique, L., Paricio-Montesinos, R., Kumar, R., Zhang, M.D., Poulet, J.F.A., Ernfors, P. and Lewin, G.R.
Nature Communications 15 (1): 898. 6 February 2024

Simulating rigid head motion artifacts on brain magnitude MRI data-Outcome on image quality and segmentation of the cerebral cortex.
Olsson, H., Millward, J.M., Starke, L., Gladytz, T., Klein, T., Fehr, J., Lai, W.C., Lippert, C., Niendorf, T. and Waiczies, S.
PLoS ONE 19 (4): e0301132. 16 April 2024

Recapitulating the tumor microenvironment in a dish, one cell type at a time.
Ostendorf, B.N.
Cell Reports Methods 4 (6): 100800. 17 June 2024

Single-cell variations of circadian clock and immune gene expression in microglia and neurodegeneration.
Ouk, K., Yalcin, M., Rigat, L., Keren-Shaul, H., David, E., Knop, A., Böttcher, C., Kramer, A., Amit, I., Relógio, A. and Priller, J.
bioRxiv : 2024.06.16.599193. 16 June 2024

Tripartite interactions of PKA catalytic subunit and C-terminal domains of cardiac Ca(2+) channel may modulate its β-adrenergic regulation.
Oz, S., Keren-Raifman, T., Sharon, T., Subramaniam, S., Pallien, T., Katz, M., Tsemakhovich, V., Sholokh, A., Watad, B., Tripathy, D.R., Sasson, G., Chomsky-Hecht, O., Vysochek, L., Schulz-Christian, M., Fecher-Trost, C., Zühlke, K., Bertinetti, D., Herberg, F.W., Flockerzi, V., Hirsch, J.A., Klussmann, E., Weiss, S. and Dascal, N.
BMC Biology 22 (1): 276. 28 November 2024

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Neuronal substance P drives metastasis through an extracellular RNA-TLR7 axis.
Padmanaban, V., Keller, I., Seltzer, E.S., Ostendorf, B.N., Kerner, Z. and Tavazoie, S.F.
Nature 633 (8028): 207-215. 5 September 2024

Impaired hand grip strength correlates with greater disability and symptom severity in post-COVID myalgic encephalomyelitis/chronic fatigue syndrome.
Paffrath, A., Kim, L., Kedor, C., Stein, E., Rust, R., Freitag, H., Hoppmann, U., Hanitsch, L.G., Bellmann-Strobl, J., Wittke, K., Scheibenbogen, C. and Sotzny, F.
Journal of Clinical Medicine 13 (7): 2153. 8 April 2024

Harnessing transcriptomic signals for amyotrophic lateral sclerosis to identify novel drugs and enhance risk prediction.
Pain, O., Jones, A., Al Khleifat, A., Agarwal, D., Hramyka, D., Karoui, H., Kubica, J., Llewellyn, D.J., Ranson, J.M., Yao, Z., Iacoangeli, A. and Al-Chalabi, A.
Heliyon 10 (15): e35342. 15 August 2024

Rapid differentiation of MOGAD and MS after a single optic neuritis.
Pakeerathan, T., Havla, J., Schwake, C., Salmen, A., Ringelstein, M., Aktas, O., Weise, M., Gernert, J.A., Kornek, B., Bsteh, G., Pröbstel, A.K., Papadopoulou, A., Kulsvehagen, L., Ayroza Galvão Ribeiro Gomes, A.B., Cerdá-Fuertes, N., Oertel, F.C., Duchow, A.S., Paul, F., Stellmann, J.P., Stolowy, N., Hellwig, K., Schneider-Gold, C., Kümpfel, T., Gold, R., Albrecht, P. and Ayzenberg, I.
Journal of Neurology 271 (11): 7222-7231. November 2024

Mechanosensitive PIEZO2 channels shape coronary artery development.
Pampols-Perez, M., Fürst, C., Sánchez-Carranza, O., Cano, E., Raimundo, S., Lindberg, E.L., Taube, M., Heuser, A., Sporbert, A., Hübner, N., Gerhardt, H., Lewin, G.R. and Hammes, A.
bioRxiv : 2024.07.08.602502. 11 July 2024

The artificial intelligence-based model ANORAK improves histopathological grading of lung adenocarcinoma.
Pan, X., AbdulJabbar, K., Coelho-Lima, J., Grapa, A.I., Zhang, H., Cheung, A.H.K., Baena, J., Karasaki, T., Wilson, C.R., Sereno, M., Veeriah, S., Aitken, S.J., Hackshaw, A., Nicholson, A.G., Jamal-Hanjani, M., Swanton, C., Yuan, Y., Le Quesne, J. and Moore, D.A.
Nature Cancer 5 (2): 347-363. February 2024

GIMAP5 deficiency reveals a mammalian ceramide-driven longevity assurance pathway.
Park, A.Y., Leney-Greene, M., Lynberg, M., Gabrielski, J.Q., Xu, X., Schwarz, B., Zheng, L., Balasubramaniyam, A., Ham, H., Chao, B., Zhang, Y., Matthews, H.F., Cui, J., Yao, Y., Kubo, S., Chanchu, J.M., Morawski, A.R., Cook, S.A., Jiang, P., Ravell, J.C., Cheng, Y.H., George, A., Faruqi, A., Pagalilauan, A.M., Bergerson, J.R.E., Ganesan, S., Chauvin, S.D., Aluri, J., Edwards-Hicks, J., Bohrnsen, E., Tippett, C., Omar, H., Xu, L., Butcher, G.W., Pascall, J., Karakoc-Aydiner, E., Kiykim, A., Maecker, H., Tezcan, İ., Esenboga, S., Heredia, R.J., Akata, D., Tekin, S., Kara, A., Kuloglu, Z., Unal, E., Kendirli, T., Dogu, F., Karabiber, E., Atkinson, T.P., Cochet, C., Filhol, O., Bosio, C.M., Davis, M.M., Lifton, R.P., Pearce, E.L., Daumke, O., Aytekin, C., Şahin, G.E., Aksu, A.Ü., Uzel, G., Koneti Rao, V., Sari, S., Boztug, K., Cagdas, D., Haskologlu, S., Ikinciogullari, A., Schwefel, D., Vilarinho, S., Baris, S., Ozen, A., Su, H.C. and Lenardo, M.J.
Nature Immunology 25 (2): 282-293. February 2024

Cognition in patients with myelin oligodendrocyte glycoprotein antibody-associated disease: a prospective, longitudinal, multicentre study of 113 patients (CogniMOG-Study).
Passoke, S., Stern, C., Häußler, V., Kümpfel, T., Havla, J., Engels, D., Jarius, S., Wildemann, B., Korporal-Kuhnke, M., Senel, M., Stellmann, J.P., Warnke, C., Grothe, M., Schülke, R., Gingele, S., Kretschmer, J.R., Klotz, L., Walter, A., Then Bergh, F., Aktas, O., Ringelstein, M., Ayzenberg, I., Schwake, C., Kleiter, I., Sperber, P.S., Rust, R., Schindler, P., Bellmann-Strobl, J., Paul, F., Kopp, B., Trebst, C. and Hümmert, M.W.
Journal of Neurology Neurosurgery and Psychiatry 30 July 2024 (In Press)

Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture.
Patsalos, A., Halasz, L., Oleksak, D., Wei, X., Nagy, G., Tzerpos, P., Conrad, T., Hammers, D.W., Sweeney, H.L. and Nagy, L.
Journal of Clinical Investigation 134 (20): e173858. 15 October 2024

Multiple Sklerose.
Paul, F. and Seifert, R.
In: Arzneiverordnungs-Report 2023. Springer, Berlin, Heidelberg, Berlin, Heidelberg, Germany, 531-552. ISBN 978-3-662-68371-2 22 February 2024

Increased abundance of Firmicutes and depletion of Bacteroidota predicts poor outcome in chronic lymphocytic leukemia.
Paziewska, M., Szelest, Mo., Kiełbus, M., Masternak, M., Zaleska, J., Wawrzyniak, E., Kotkowska, A., Siemieniuk-Ryś, M., Morawska, M., Kalicińska, E., Jabłonowska, P., Wróbel, T., Wolska-Washer, A., Błoński, J.Z., Robak, T., Bullinger, L. and Giannopoulos, K.
Oncology letters 28 (5): 552. November 2024

Single-cell-resolved interspecies comparison shows a shared inflammatory axis and a dominant neutrophil-endothelial program in severe COVID-19.
Peidli, S., Nouailles, G., Wyler, E., Adler, J.M., Kunder, S., Voß, A., Kazmierski, J., Pott, F., Pennitz, P., Postmus, D., Teixeira Alves, L.G., Goffinet, C., Gruber, A.D., Blüthgen, N., Witzenrath, M., Trimpert, J., Landthaler, M. and Praktiknjo, S.D.
Cell Reports 43 (6): 114328. 25 June 2024

Multiomic analyses uncover immunological signatures in acute and chronic coronary syndromes.
Pekayvaz, K., Losert, C., Knottenberg, V., Gold, C., van Blokland, I.V., Oelen, R., Groot, H.E., Benjamins, J.W., Brambs, S., Kaiser, R., Gottschlich, A., Hoffmann, G.V., Eivers, L., Martinez-Navarro, A., Bruns, N., Stiller, S., Akgöl, S., Yue, K., Polewka, V., Escaig, R., Joppich, M., Janjic, A., Popp, O., Kobold, S., Petzold, T., Zimmer, R., Enard, W., Saar, K., Mertins, P., Huebner, N., van der Harst, P., Franke, L.H., van der Wijst, M.G.P., Massberg, S., Heinig, M., Nicolai, L. and Stark, K.
Nature Medicine 30 (6): 1696-1710. June 2024

The IgCAM BT-IgSF (IgSF11) is essential for connexin43-mediated astrocyte-astrocyte coupling in mice.
Pelz, L., Dossou, L., Kompier, N., Jüttner, R., Siemonsmeier, G., Meyer, N., Lowenstein, E.D., Lahmann, I., Kettenmann, H., Birchmeier, C. and Rathjen, F.G.
eNeuro 11 (3): ENEURO.0283-23.2024. 22 February 2024 (In Press)

Directed and acyclic synaptic connectivity in the human layer 2-3 cortical microcircuit.
Peng, Y., Bjelde, A., Aceituno, P.V., Mittermaier, F.X., Planert, H., Grosser, S., Onken, J., Faust, K., Kalbhenn, T., Simon, M., Radbruch, H., Fidzinski, P., Schmitz, D., Alle, H., Holtkamp, M., Vida, I., Grewe, B.F. and Geiger, J.R.P.
Science 384 (6693): 338-343. 26 April 2024

Tracking rare single donor and recipient immune and leukemia cells after allogeneic hematopoietic cell transplantation using mitochondrial DNA mutations.
Penter, L., Cieri, N., Maurer, K., Kwok, M., Lyu, H., Lu, W.S., Oliveira, G., Gohil, S.H., Leshchiner, I., Lareau, C.A., Ludwig, L.S., Neuberg, D.S., Kim, H.T., Li, S., Bullinger, L., Ritz, J., Getz, G., Garcia, J.S., Soiffer, R.J., Livak, K.J. and Wu, C.J.
Blood Cancer Discovery 5 (6): 442-459. 1 November 2024

Challenges and opportunities in the clinical translation of high-resolution spatial transcriptomics.
Pentimalli, T.M., Karaiskos, N. and Rajewsky, N.
Annual Review of Pathology : Mechanisms of Disease 30 October 2024 (In Press)

Pial collaterals develop through mosaic colonization of capillaries by arterial and microvascular endothelial cells.
Perovic, T., Hollfinger, I., Mayer, S., Lips, J., Dopatka, M., Harms, C. and Gerhardt, H.
bioRxiv : 2023.10.09.561542v3. 7 February 2024

Human genetics of defects of situs.
Perrot, A. and Rickert-Sperling, S.
Advances in Experimental Medicine and Biology 1441 (1411): 705-717. 18 June 2024

Human genetics of ventricular septal defect.
Perrot, A. and Rickert-Sperling, S.
Advances in Experimental Medicine and Biology 1441 (1141): 505-534. 18 June 2024

SARA captures disparate progression and responsiveness in spinocerebellar ataxias.
Petit, E., Schmitz-Hübsch, T., Coarelli, G., Jacobi, H., Heinzmann, A., Figueroa, K.P., Perlman, S.L., Gomez, C.M., Wilmot, G.R., Schmahmann, J.D., Ying, S.H., Zesiewicz, T.A., Paulson, H.L., Shakkottai, V.G., Bushara, K.O., Kuo, S.H., Geschwind, M.D., Xia, G., Pulst, S.M., Subramony, S.H., Ewenczyk, C., Brice, A., Durr, A., Klockgether, T., Ashizawa, T. and Tezenas du Montcel, S.
Journal of Neurology 271 (7): 3743-3753. July 2024

Rewired type I IFN signaling is linked to age-dependent differences in COVID-19.
Petrov, L., Brumhard, S., Wisniewski, S., Georg, P., Hillus, D., Hiller, A., Astaburuaga-García, R., Blüthgen, N., Wyler, E., Vogt, K., Dey, H.P., von Stillfried, S., Iwert, C., Bülow, R.D., Märkl, B., Maas, L., Langner, C., Meyer, T., Loske, J., Eils, R., Lehmann, I., Ondruschka, B., Ralser, M., Trimpert, J., Boor, P., Bedoui, S., Meisel, C., Mall, M.A., Corman, V.M., Sander, L.E., Röhmel, J. and Sawitzki, B.
bioRxiv : 2024.10.23.619479. 23 October 2024

In preprints: keeping endothelial cell specification and vascular development in check.
Petzold, T. and Gerhardt, H.
Development 151 (18): dev204338. September 2024

Pre-diagnostic circulating resistin concentrations and mortality among individuals with colorectal cancer: results from the European Prospective Investigation into Cancer and Nutrition study.
Pham, T.T., Nimptsch, K., Aleksandrova, K., Jenab, M., Fedirko, V., Wu, K., Eriksen, A.K., Tjønneland, A., Severi, G., Rothwell, J., Kaaks, R., Katzke, V., Catalano, A., Agnoli, C., Masala, G., De Magistris, M.S., Tumino, R., Vermeulen, R., Aizpurua, A., Trobajo-Sanmartín, C., Chirlaque, M.D., Sánchez, M.J., Lu, S.S.M., Cross, A.J., Christakoudi, S., Weiderpass, E. and Pischon, T.
International Journal of Cancer 154 (9): 1596-1606. 1 May 2024

Autophagy acts as a brake on obesity-related fibrosis by controlling purine nucleoside signalling.
Piletic, K., Kayvanjoo, A.H., Richter, F.C., Borsa, M., Lechuga-Vieco, A.V., Popp, O., Grenet, S., Ko, J.K.L., Zec, K., Kyriazi, M., Koneva, L., Sansom, S., Mertins, P., Powrie, F., Alsaleh, G. and Simon, A.K.
bioRxiv : 2024.09.17.613382. 17 September 2024

Identifying chromosome movement patterns during meiosis using ChroMo.
Pinto-Cruz, J., Correas, M., Mendoza-Madrigal, R., León-Periñán, D. and Fernández-Álvarez, A.
Methods in Molecular Biology 2818 : 271-288. 2024

Spontaneous single-nucleotide substitutions and microsatellite mutations have distinct distributions of fitness effects.
Plavskin, Y., de Biase, M.S., Ziv, N., Janská, L., Zhu, Y.O., Hall, D.W., Schwarz, R.F., Tranchina, D. and Siegal, M.L.
PLoS Biology 22 (7): e3002698. 1 July 2024

Intergenic risk variant rs56258221 skews the fate of naive CD4(+) T cells via miR4464-BACH2 interplay in primary sclerosing cholangitis.
Poch, T., Bahn, J., Casar, C., Krause, J., Evangelakos, I., Gilladi, H., Kunzmann, L.K., Laschtowitz, A., Iuso, N., Schäfer, A.M., Liebig, L.A., Steinmann, S., Sebode, M., Folseraas, T., Engesæter, L.K., Karlsen, T.H., Franke, A., Hubner, N., Schlein, C., Galun, E., Huber, S., Lohse, A.W., Gagliani, N., Schwinge, D. and Schramm, C.
Cell Reports Medicine 5 (7): 101620. 16 July 2024

Gain-of-function variants in CLCN7 cause hypopigmentation and lysosomal storage disease.
Polovitskaya, M.M., Rana, T., Ullrich, K., Murko, S., Bierhals, T., Vogt, G., Stauber, T., Kubisch, C., Santer, R. and Jentsch, T.J.
Journal of Biological Chemistry 300 (7): 107437. July 2024

A future of AI-driven personalized care for people with multiple sclerosis.
Praet, J., Anderhalten, L., Comi, G., Horakova, D., Ziemssen, T., Vermersch, P., Lukas, C., van Leemput, K., Steppe, M., Aguilera, C., Kadas, E.M., Bertrand, A., van Rampelbergh, J., de Boer, E., Zingler, V., Smeets, D., Ribbens, A. and Paul, F.
Frontiers in Immunology 15 : 1446748. 19 August 2024

Hif-2α programs oxygen chemosensitivity in chromaffin cells.
Prange-Barczynska, M., Jones, H.A., Sugimoto, Y., Cheng, X., Lima, J.D., Ratnayaka, I., Douglas, G., Buckler, K.J., Ratcliffe, P.J., Keeley, T.P. and Bishop, T.
Journal of Clinical Investigation 134 (18): e174661. 6 August 2024

Scalable image-based visualization and alignment of spatial transcriptomics datasets.
Preibisch, S., Innerberger, M., León-Periñán, D., Karaiskos, N. and Rajewsky, N.
bioRxiv : 2021.12.07.471629v3. 7 October 2024

IA-PACS-CFS: a double-blinded, randomized, sham-controlled, exploratory trial of immunoadsorption in patients with chronic fatigue syndrome (CFS) including patients with post-acute COVID-19 CFS (PACS-CFS).
Preßler, H., Machule, M.L., Ufer, F., Bünger, I., Li, L.Y., Buchholz, E., Werner, C., Beraha, E., Wagner, F., Metz, M., Burock, S., Bruckert, L., Franke, C., Wilck, N., Krüger, A., Reshetnik, A., Eckardt, K.U., Endres, M. and Prüss, H.
Trials 25 (1): 172. 7 March 2024

Urinary CD4(+) T cells predict renal relapse in ANCA-associated vasculitis: results of the PRE-FLARED study.
Prskalo, L., Skopnik, C.M., Goerlich, N., Freund, P., Wagner, L., Grothgar, E., Mirkheshti, P., Klocke, J., Sonnemann, J., Metzke, D., Schneider, U., Hiepe, F., Eckardt, K.U., Salama, A.D., Bieringer, M., Schreiber, A. and Enghard, P.
Journal of the American Society of Nephrology 35 (4): 483-494. April 2024

Novel ectopic expression of zona pellucida 3 glycoprotein in lung cancer promotes tumor growth.
Pulawska-Moon, K., Ponikwicka-Tyszko, D., Lebiedzinska, W., Pilaszewicz-Puza, A., Bernaczyk, P., Koda, M., Lupu, O., Milewska, G., Huang, C.C.J., Zheng, H., Schiele, P., Na, I.K., Frentsch, M., Li, X., Toppari, J., Wolczynski, S., Coelingh Bennink, H.J.T., Huhtaniemi, I. and Rahman, N.A.
International Journal of Cancer 155 (10): 1846-1857. 15 November 2024

Oropharyngeal microbial ecosystem perturbations influence the risk for acute respiratory infections in common variable immunodeficiency.
Pulvirenti, F., Giufrè, M., Pentimalli, T.M., Camilli, R., Milito, C., Villa, A., Sculco, E., Cerquetti, M., Pantosti, A. and Quinti, I.
Frontiers in Immunology 15 : 1371118. 30 May 2024

Elimusertib has antitumor activity in preclinical patient-derived pediatric solid tumor models.
Pusch, F.F., Dorado Garcia, H., Xu, R., Gürgen, D., Bei, Y., Brückner, L., Röefzaad, C., von Stebut, J., Bardinet, V., Chamorro Gonzalez, R., Eggert, A., Schulte, J.H., Hundsdörfer, P., Seifert, G., Haase, K., Schäfer, B.W., Wachtel, M., Kühl, A.A., Ortiz, M.V., Wengner, A.M., Scheer, M. and Henssen, A.G.
Molecular Cancer Therapeutics 23 (4): 507-519. 2 April 2024

MHC Hammer reveals genetic and non-genetic HLA disruption in cancer evolution.
Puttick, C., Jones, T.P., Leung, M.M., Galvez-Cancino, F., Liu, J., Varas-Godoy, M., Rowan, A., Pich, O., Martinez-Ruiz, C., Bentham, R., Dijkstra, K.K., Black, J.R.M., Rosenthal, R., Kanu, N., Litchfield, K., Salgado, R., Moore, D.A., Van Loo, P., Jamal-Hanjani, M., Quezada, S.A., Swanton, C. and McGranahan, N.
Nature Genetics 56 (10): 2121-2131. October 2024

Comparison of Xrn1 and Rat1 5′ → 3′ exoribonucleases in budding yeast supports the specific role of Xrn1 in cotranslational mRNA decay.
Pérez-Ortín, J.E., Jordán-Pla, A., Zhang, Y., Moreno-García, J., Bassot, C., Barba-Aliaga, M., de Campos-Mata, L., Choder, M., Díez, J., Piazza, I., Pelechano, V. and García-Martínez, J.
Yeast 41 (7): 458-472. July 2024

Q

Delegation of the primary responsibility for MRI informed consent to technical assistants—findings from the NAKO health study.
Quinsten, A.S., Haubold, J., Kröncke, T., Friedrich, L., Pischon, T., Niendorf, T., Forsting, M., Hosten, N., Völzke, H., Bamberg, F., Schlett, C.L., Kauczor, H.U., Brandelik, S. and Theysohn, J.
Deutsches Ärzteblatt international 121 (7): 228-229. 5 April 2024

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Proteomic and transcriptomic profiling of brainstem, cerebellum and olfactory tissues in early- and late-phase COVID-19.
Radke, J., Meinhardt, J., Aschman, T., Chua, R.L., Farztdinov, V., Lukassen, S., Ten, F.W., Friebel, E., Ishaque, N., Franz, J., Huhle, V.H., Mothes, R., Peters, K., Thomas, C., Schneeberger, S., Schumann, E., Kawelke, L., Jünger, J., Horst, V., Streit, S., von Manitius, R., Körtvélyessy, P., Vielhaber, S., Reinhold, D., Hauser, A.E., Osterloh, A., Enghard, P., Ihlow, J., Elezkurtaj, S., Horst, D., Kurth, F., Müller, M.A., Gassen, N.C., Melchert, J., Jechow, K., Timmermann, B., Fernandez-Zapata, C., Böttcher, C., Stenzel, W., Krüger, E., Landthaler, M., Wyler, E., Corman, V., Stadelmann, C., Ralser, M., Eils, R., Heppner, F.L., Mülleder, M., Conrad, C. and Radbruch, H.
Nature Neuroscience 27 (3): 409-420. March 2024

Selection on synonymous sites: the unwanted transcript hypothesis.
Radrizzani, S., Kudla, G., Izsvák, Z. and Hurst, L.D.
Nature Reviews Genetics 25 (6): 431-448. June 2024

The IBEX Knowledge-Base: Achieving more together with open science.
Radtke, A.J., Anidi, I., Arakkal, L., Arroyo-Mejias, A., Beuschel, R.T., Börner, K., Chu, C.J., Clark, B., Clatworthy, M.R., Colautti, J., Croteau, J., Denha, S., Dever, R., Dutra, W.O., Fritzsche, S., Fullam, S., Gerner, M.Y., Gola, A., Gollob, K.J., Hernandez, J.M., Hor, J.L., Ichise, H., Jing, Z., Jonigk, D., Kandov, E., Kastenmüller, W., Koenig, J.F.E., Kothurkar, A., Kreins, A.Y., Lamborn, I., Lin, Y., Luciano Pereira Morais, K., Lunich, A., Luz, J.C.S., MacDonald, R.B., Makranz, C., Maltez, V.I., Moriaty, R.V., Ocampo-Godinez, J.M., Olyntho, V.M., Padhan, K., Remmert, K., Richoz, N., Schrom, E.C., Shang, W., Shi, L., Shih, R.M., Speranza, E., Stierli, S., Teichmann, S.A., Veres, T.Z., Vierhout, M., Wachter, B.T., Wade-Vallance, A.K., Williams, M., Zangger, N., Germain, R.N. and Yaniv, Z.
arXiv : 2407.19059v1. 26 July 2024

Helmet radio frequency phased array applicators enhance thermal magnetic resonance of brain tumors.
Rahimi, F., Nurzed, B., Eigentler, T.W., Berangi, M., Oberacker, E., Kuehne, A., Ghadjar, P., Millward, J.M., Schuhmann, R. and Niendorf, T.
Bioengineering 11 (7): 733. July 2024

Metadata-guided feature disentanglement for functional genomics.
Rakowski, A., Monti, R., Huryn, V., Lemanczyk, M., Ohler, U. and Lippert, C.
Bioinformatics 40 (Suppl 2): ii4-ii10. September 2024

TransferGWAS of T1-weighted brain MRI data from UK Biobank.
Rakowski, A., Monti, R. and Lippert, C.
PLoS Genetics 20 (12): e1011332. 13 December 2024 (In Press)

The proteogenomic landscape of multiple myeloma reveals insights into disease biology and therapeutic opportunities.
Ramberger, E., Sapozhnikova, V., Ng, Y.L.D., Dolnik, A., Ziehm, M., Popp, O., Sträng, E., Kull, M., Grünschläger, F., Krüger, J., Benary, M., Müller, S., Gao, X., Murgai, A., Haji, M., Schmidt, A., Lutz, R., Nogai, A., Braune, J., Laue, D., Langer, C., Khandanpour, C., Bassermann, F., Döhner, H., Engelhardt, M., Straka, C., Hundemer, M., Beule, D., Haas, S., Keller, U., Einsele, H., Bullinger, L., Knop, S., Mertins, P. and Krönke, J.
Nature Cancer 5 (8): 1267-1284. August 2024

Multilayer nanocarrier for the codelivery of interferons: a promising strategy for biocompatible and long-acting antiviral treatment.
Ramos, T.I., Villacis-Aguirre, C.A., Sandoval, F.S., Martin-Solano, S., Manrique-Suárez, V., Rodríguez, H., Santiago-Padilla, L., Debut, A., Gómez-Gaete, C., Arias, M.T., Montesino, R., Lamazares, E., Cabezas, I., Hugues, F., Parra, N.C., Altamirano, C., Ramos, O.S., Santiago-Vispo, N. and Toledo, J.R.
Pharmaceutics 16 (11): 1349. 22 October 2024

Single-cell genomics-based immune and disease monitoring in blood malignancies.
Rathgeber, A.C., Ludwig, L.S. and Penter, L.
Clinical Hematology International 6 (2): 62-84. 14 June 2024

Liam tackles complex multimodal single-cell data integration challenges.
Rautenstrauch, P. and Ohler, U.
Nucleic Acids Research 52 (12): e52. 8 July 2024

JUN mediates the senescence associated secretory phenotype and immune cell recruitment to prevent prostate cancer progression.
Redmer, T., Raigel, M., Sternberg, C., Ziegler, R., Probst, C., Lindner, D., Aufinger, A., Limberger, T., Trachtova, K., Kodajova, P., Högler, S., Schlederer, M., Stoiber, S., Oberhuber, M., Bolis, M., Neubauer, H.A., Miranda, S., Tomberger, M., Harbusch, N.S., Garces de Los Fayos Alonso, I., Sternberg, F., Moriggl, R., Theurillat, J.P., Tichy, B., Bystry, V., Persson, J.L., Mathas, S., Aberger, F., Strobl, B., Pospisilova, S., Merkel, O., Egger, G., Lagger, S. and Kenner, L.
Molecular Cancer 23 (1): 114. 29 May 2024

Barriers in healthcare to the use of optical coherence tomography angiography in multiple sclerosis.
Reeß, L.G., Salih, H., Delikaya, M., Paul, F. and Oertel, F.C.
Neurology and Therapy 5 November 2024 (In Press)

Sex- and site-specific associations of circulating lipocalin 2 and incident colorectal cancer: Results from the EPIC cohort.
Reichmann, R., Nimptsch, K., Pischon, T., Gunter, M.J., Jenab, M., Eriksen, A.K., Tjonneland, A., Janke, J., Katzke, V., Kaaks, R., Schulze, M.B., Eichelmann, F., Masala, G., Sieri, S., Pasanisi, F., Tumino, R., Giraudo, M.T., Rothwell, J., Severi, G., Jakszyn, P., Sanchez-Perez, M.J., Amiano, P., Colorado-Yohar, S.M., Guevara, M., van Guelpen, B., Aglago, E.K., Heath, A.K., Smith-Byrne, K., Weiderpass, E. and Aleksandrova, K.
International Journal of Cancer 7 November 2024 (In Press)

Biomarker signatures associated with ageing free of major chronic diseases: results from a population-based sample of the EPIC-Potsdam cohort.
Reichmann, R., Schulze, M.B., Pischon, T., Weikert, C. and Aleksandrova, K.
Age and Ageing 53 (Supplement_2): ii60-ii69. May 2024

Cellular senescence: Neither irreversible nor reversible.
Reimann, M., Lee, S. and Schmitt, C.A.
Journal of Experimental Medicine 221 (4): e20232136. 1 April 2024

Understanding metric-related pitfalls in image analysis validation.
Reinke, A., Tizabi, M.D., Baumgartner, M., Eisenmann, M., Heckmann-Nötzel, D., Kavur, A.E., Rädsch, T., Sudre, C.H., Acion, L., Antonelli, M., Arbel, T., Bakas, S., Benis, A., Buettner, F., Cardoso, M.J., Cheplygina, V., Chen, J., Christodoulou, E., Cimini, B.A., Farahani, K., Ferrer, L., Galdran, A., van Ginneken, B., Glocker, B., Godau, P., Hashimoto, D.A., Hoffman, M.M., Huisman, M., Isensee, F., Jannin, P., Kahn, C.E., Kainmueller, D., Kainz, B., Karargyris, A., Kleesiek, J., Kofler, F., Kooi, T., Kopp-Schneider, A., Kozubek, M., Kreshuk, A., Kurc, T., Landman, B.A., Litjens, G., Madani, A., Maier-Hein, K., Martel, A.L., Meijering, E., Menze, B., Moons, K.G.M., Müller, H., Nichyporuk, B., Nickel, F., Petersen, J., Rafelski, S.M., Rajpoot, N., Reyes, M., Riegler, M.A., Rieke, N., Saez-Rodriguez, J., Sánchez, C.I., Shetty, S., Summers, R.M., Taha, A.A., Tiulpin, A., Tsaftaris, S.A., Van Calster, B., Varoquaux, G., Yaniv, Z.R., Jäger, P.F. and Maier-Hein, L.
Nature Methods 21 (2): 182–194. February 2024

Protease-activated receptor-1 IgG autoantibodies in patients with COVID-19.
Reinshagen, L., Nageswaran, V., Heidecke, H., Schulze-Forster, K., Wilde, A.C.B., Ramezani Rad, P., Poller, W., Asmus, E., Simmons, S., Kuebler, W.M., Witzenrath, M., Markó, L., Jakobs, K., Puccini, M., Leistner, D.M., Rauch-Kröhnert, U., Kränkel, N., Forslund, S.K., Landmesser, U., Müller, D.N. and Haghikia, A.
Thrombosis and Haemostasis 124 (12): 1164-1166. December 2024

USP10 drives cancer stemness and enables super-competitor signalling in colorectal cancer.
Reissland, M., Hartmann, O., Tauch, S., Bugter, J.M., Prieto-Garcia, C., Schulte, C., Loebbert, S., Solvie, D., Bitman-Lotan, E., Narain, A., Jacomin, A.C., Schuelein-Voelk, C., Fuss, C.T., Pahor, N., Ade, C., Buck, V., Potente, M., Li, V., Beliu, G., Wiegering, A., Grossmann, T., Eilers, M., Wolf, E., Maric, H., Rosenfeldt, M., Maurice, M.M., Dikic, I., Gallant, P., Orian, A. and Diefenbacher, M.E.
Oncogene 43 (50): 3645-3659. 2 December 2024

Abnormal biomarkers predict complex FAS or FADD defects missed by exome sequencing.
Rensing-Ehl, A., Lorenz, M.R., Führer, M., Willenbacher, W., Willenbacher, E., Sopper, S., Abinun, M., Maccari, M.E., König, C., Haegele, P., Fuchs, S., Castro, C., Kury, P., Pelle, O., Klemann, C., Heeg, M., Thalhammer, J., Wegehaupt, O., Fischer, M., Goldacker, S., Schulte, B., Biskup, S., Chatelain, P., Schuster, V., Warnatz, K., Grimbacher, B., Meinhardt, A., Holzinger, D., Oommen, P.T., Hinze, T., Hebart, H., Seeger, K., Lehmberg, K., Leahy, T.R., Claviez, A., Vieth, S., Schilling, F.H., Fuchs, I., Groß, M., Rieux-Laucat, F., Magerus, A., Speckmann, C., Schwarz, K. and Ehl, S.
Journal of Allergy and Clinical Immunology 153 (1): 297-308. January 2024

PITX2 deficiency leads to atrial mitochondrial dysfunction.
Reyat, J.S., Sommerfeld, L.C., O'Reilly, M., Cardoso, V.R., Thiemann, E., Khan, A.O., O'Shea, C., Harder, S., Müller, C., Barlow, J., Stapley, R.J., Chua, W., Kabir, S.N., Grech, O., Hummel, O., Hübner, N., Kääb, S., Mont, Ll., Hatem, S.N., Winters, J., Zeemering, S., Morgan, N.V., Rayes, J., Gehmlich, K., Stoll, M., Brand, T., Schweizer, M., Piasecki, A., Schotten, U., Gkoutos, G.V., Lorenz, K., Cuello, F., Kirchhof, P. and Fabritz, L.
Cardiovascular Research 120 (15): 1907-1923. November 2024

Renal extramedullary hematopoiesis in mast cell leukemia with bone marrow fibrosis.
Rieke, D.T., Schmalbrock, L.K., Ihlow, J., Kleo, K., von Brünneck, A.C., Nolte, F., Keller, U. and Ochsenreither, S.
Case Reports in Hematology 2024 : 1-6. 3 January 2024

Eculizumab use in neuromyelitis optica spectrum disorders: routine clinical care data from a european cohort.
Ringelstein, M., Asseyer, S., Lindenblatt, G., Fischer, K., Pul, R., Skuljec, J., Revie, L., Giglhuber, K., Häußler, V., Karenfort, M., Hellwig, K., Paul, F., Bellmann-Strobl, J., Otto, C., Ruprecht, K., Ziemssen, T., Emmer, A., Rothhammer, V., Nickel, F.T., Angstwurm, K., Linker, R., Laurent, S.A., Warnke, C., Jarius, S., Korporal-Kuhnke, M., Wildemann, B., Wolff, S., Seipelt, M., Yalachkov, Y., Retzlaff, N., Zettl, U.K., Rommer, P.S., Kowarik, M.C., Wickel, J., Geis, C., Hümmert, M.W., Trebst, C., Senel, M., Gold, R., Klotz, L., Kleinschnitz, C., Meuth, S.G., Aktas, O., Berthele, A. and Ayzenberg, I.
Neurology 103 (9): e209888. 12 November 2024

Serotonin drives aggression and social behaviours of laboratory mice in a semi-natural environment.
Rivalan, M., Alonso, L., Mosienko, V., Bey, P., Hyde, A., Bader, M., Winter, Y. and Alenina, N.
Frontiers in Behavioral Neuroscience 18 18 September 2024

Renin is essential for angiotensin II formation in the brain.
Rodrigues, A.F., Domenig, O., Garrelds, I.M., Danser, J.A.H., Alenina, N., Poglitsch, M. and Bader, M.
Journal of the American Heart Association 13 (22): e034209. 19 November 2024

Angiotensin-(1-12): does it exist? A critical evaluation in humans, rats, and mice.
Rodrigues, A.F., Domenig, O., Poglitsch, M., Bader, M. and Danser, A.H.J.
Hypertension 81 (8): 1776-1784. August 2024

Functional and evolutionary significance of unknown genes from uncultivated taxa.
Rodríguez Del Río, Á., Giner-Lamia, J., Cantalapiedra, C.P., Botas, J., Deng, Z., Hernández-Plaza, A., Munar-Palmer, M., Santamaría-Hernando, S., Rodríguez-Herva, J.J., Ruscheweyh, H.J., Paoli, L., Schmidt, T.S.B., Sunagawa, S., Bork, P., López-Solanilla, E., Coelho, L.P. and Huerta-Cepas, J.
Nature 626 (7998): 377-384. 8 February 2024

Shedding light on the D1‐like receptors: a fluorescence‐based toolbox for visualization of the D1 and D5 receptors.
Rosier, N., Moennich, D., Nagl, M., Schihada, H., Sirbu, A., Konar, N., Reyes-Resina, I., Navarro, G., Franco, R., Kolb, P., Annibale, P. and Pockes, S.
ChemBioChem 25 (2): e202300658. 15 January 2024

Structural analysis of PLD3 reveals insights into the mechanism of lysosomal 5' exonuclease-mediated nucleic acid degradation.
Roske, Y., Cappel, C., Cremer, N., Hoffmann, P., Koudelka, T., Tholey, A., Heinemann, U., Daumke, O. and Damme, M.
Nucleic Acids Research 52 (1): 370-384. 11 January 2024

Sociality shapes mitochondrial adaptations supporting hypoxia tolerance.
Rossi, A., Ruwolt, M., Kakouri, P., Kosten, T., Kunz, S., Puchkov, D., Reznick, J., Purfürst, B., Omerbašić, D., Méndez Aranda, D., Carai, G., Mastrobuoni, G., Hart, D.W., Carraro, M., Tommasin, L., Bennett, N.C., Bégay, V., Faelber, K., Daumke, O., Bernardi, P., Park, T.J., Kempa, S., Liu, F. and Lewin, G.R.
bioRxiv : 2024.09.30.615914. 2 October 2024

Does age protect against loss of tonotopy after acute deafness in adulthood?
Rosskothen-Kuhl, N., Green, S. and Jakob, T.F.
bioRxiv : 2024.05.03.592347. 3 May 2024

Normal male fertility in a mouse model of KPNA2 deficiency.
Rother, F., Abu Hweidi, D., Hartmann, E. and Bader, M.
PLoS ONE 19 (10): e0304189. 18 October 2024

Karyopherin α2 is a maternal effect gene required for early embryonic development and female fertility in mice.
Rother, F., Depping, R., Popova, E., Huegel, S., Heiler, A., Hartmann, E. and Bader, M.
FASEB Journal 38 (8): e23623. 30 April 2024

Pathogenic mutations of human phosphorylation sites affect protein–protein interactions.
Rrustemi, T., Meyer, K., Roske, Y., Uyar, B., Akalin, A., Imami, K., Ishihama, Y., Daumke, O. and Selbach, M.
Nature Communications 15 (1): 3146. 11 April 2024

Evolution of translational control and the emergence of genes and open reading frames in human and non-human primate hearts.
Ruiz-Orera, J., Miller, D.C., Greiner, J., Genehr, C., Grammatikaki, A., Blachut, S., Mbebi, J., Patone, G., Myronova, A., Adami, E., Dewani, N., Liang, N., Hummel, O., Mücke, M.B., Hildebrandt, T.B., Fritsch, G., Schrade, L., Zimmermann, W.H., Kondova, I., Diecke, S., van Heesch, S. and Hübner, N.
Nature Cardiovascular Research 3 (10): 1217-1235. October 2024

Comprehensive characterization of the viscoelastic properties of bovine submaxillary mucin (BSM) hydrogels and the effect of additives.
Rulff, H., Schmidt, R.F., Wei, L.F., Fentker, K., Kerkhoff, Y., Mertins, P., Mall, M.A., Lauster, D. and Gradzielski, M.
Biomacromolecules 25 (7): 4014-4029. 8 July 2024

Automated classification of cellular expression in multiplexed imaging data with Nimbus.
Rumberger, J.L., Greenwald, N.F., Ranek, J.S., Boonrat, P., Walker, C., Franzen, J., Varra, S.R., Kong, A., Sowers, C., Liu, C.C., Averbukh, I., Piyadasa, H., Vanguri, R., Nederlof, I., Wang, X.J., Van Valen, D., Kok, M., Hollmann, T.J., Kainmueller, D. and Angelo, M.
bioRxiv : 2024.06.02.597062. 3 June 2024

Content-based image retrieval assists radiologists in diagnosing eye and orbital mass lesions in MRI.
Rumberger, J.L., Lim, W., Wildfeuer, B., Sodemann, E.B., Lecler, A., Stemplinger, S., Issever, A.S., Sepahdari, A.R., Langner, S., Kainmueller, D., Hamm, B. and Erg-Eigner, K.
medRxiv : 2024.07.24.24310920. 24 July 2024

IL-33 controls IL-22-dependent antibacterial defense by modulating the microbiota.
Röwekamp, I., Maschirow, L., Rabes, A., Fiocca Vernengo, F., Hamann, L., Heinz, G.A., Mashreghi, M.F., Caesar, S., Milek, M., Fagundes Fonseca, A.C., Wienhold, S.M., Nouailles, G., Yao, L., Mousavi, S., Bruder, D., Boehme, J.D., Puzianowska-Kuznicka, M., Beule, D., Witzenrath, M., Löhning, M., Klose, C.S.N., Heimesaat, M.M., Diefenbach, A. and Opitz, B.
Proceedings of the National Academy of Sciences of the United States of America 121 (22): e2310864121. 28 May 2024

Measurable residual disease monitoring in AML with FLT3-ITD treated with intensive chemotherapy plus midostaurin.
Rücker, F.G., Bullinger, L., Cocciardi, S., Skambraks, S., Luck, T.J., Weber, D., Krzykalla, J., Pozek, E., Schneider, I.J., Corbacioglu, A., Gaidzik, V.I., Meid, A., Aicher, S., Stegelmann, F., Schrade, A., Theis, F., Fiedler, W., Salih, H.R., Wulf, G.G., Salwender, H.J., Schroeder, T., Götze, K.S., Kühn, M.W.M., Lübbert, M., Schlenk, R.F., Benner, A., Thol, F.R., Heuser, M., Ganser, A., Döhner, H. and Döhner, K.
Blood Advances 8 (23): 6067-6080. 10 December 2024

Refinement of the prognostic impact of somatic CEBPA bZIP domain mutations in acute myeloid leukemia: Results of the AML Study Group (AMLSG).
Rücker, F.G., Corbacioglu, A., Krzykalla, J., Cocciardi, S., Lengerke, C., Germing, U., Wulf, G., Samra, M.A., Teichmann, L.L., Lübbert, M., Kühn, M.W.M., Bentz, M., Westermann, J., Bullinger, L., Gaidzik, V.I., Meid, A., Aicher, S., Stegelmann, F., Weber, D., Schrade, A., Thol, F., Heuser, M., Ganser, A., Benner, A., Döhner, H. and Döhner, K.
HemaSphere 8 (7): e123. July 2024

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Autoantigen-specific CD4(+) T cells acquire an exhausted phenotype and persist in human antigen-specific autoimmune diseases.
Saggau, C., Bacher, P., Esser, D., Rasa, M., Meise, S., Mohr, N., Kohlstedt, N., Hutloff, A., Schacht, S.S., Dargvainiene, J., Martini, G.R., Stürner, K.H., Schröder, I., Markewitz, R., Hartl, J., Hastermann, M., Duchow, A., Schindler, P., Becker, M., Bautista, C., Gottfreund, J., Walter, J., Polansky, J.K., Yang, M., Naghavian, R., Wendorff, M., Schuster, E.M., Dahl, A., Petzold, A., Reinhardt, S., Franke, A., Wieczorek, M., Henschel, L., Berger, D., Heine, G., Holtsche, M., Häußler, V., Peters, C., Schmidt, E., Fillatreau, S., Busch, D.H., Wandinger, K.P., Schober, K., Martin, R., Paul, F., Leypoldt, F. and Scheffold, A.
Immunity 57 (10): 2416-2432.e8. 8 October 2024

Systematic mapping of antibiotic cross-resistance and collateral sensitivity with chemical genetics.
Sakenova, N., Cacace, E., Orakov, A., Huber, F., Varik, V., Kritikos, G., Michiels, J., Bork, P., Cossart, P., Goemans, C.V. and Typas, A.
Nature Microbiology 2 December 2024 (In Press)

Targeted proteomics reveals quantitative differences in low-abundance glycosyltransferases of patients with congenital disorders of glycosylation.
Sakson, R., Beedgen, L., Bernhard, P., Alp, K.M., Lübbehusen, N., Röth, R., Niesler, B., Luzarowski, M., Shevchuk, O., Mayer, M.P., Thiel, C. and Ruppert, T.
International Journal of Molecular Sciences 25 (2): 1191. 18 January 2024

Protocol of a prospective multicenter study on comorbidity impact on multiple sclerosis and antibody-mediated diseases of the central nervous system (COMMIT).
Samadzadeh, S., Adnan, R., Berglova, P., Barzegar, M., Debrabant, B., Roikjaer, S.G., Levy, M., Petzold, A., Palace, J., Flanagan, E.P., Mariotto, S., Skou, S.T., Froelich, A., Lotan, I., Messina, S., Geraldes, R., Asseyer, S., Stiebel-Kalish, H., Oertel, F.C., Shaygannejad, V., Sahraian, M.A., Kim, H.J., Bennett, J.L., Böttcher, C., Zimmermann, H.G., Weinshenker, B.G., Paul, F. and Asgari, N.
Frontiers in Immunology 15 : 1380025. 2 July 2024

High socioeconomic impact on prescription behavior despite unrestricted access to disease-modifying therapies in people with multiple sclerosis.
Samadzadeh, S., Havla, J., Lepka, K., Brinks, R., Meuth, S.G., Klotz, L. and Albrecht, P.
Frontiers in Immunology 15 : 1458458. 15 August 2024

Sub-type specific connectivity between CA3 pyramidal neurons may underlie their sequential activation during sharp waves.
Sammons, R.P., Masserini, S., Moreno-Velasquez, L., Metodieva, V.D., Cano, G., Sannio, A., Orlando, M., Maier, N., Kempter, R. and Schmitz, D.
bioRxiv : 2024.04.16.589773. 22 April 2024

Structure and function of the hippocampal CA3 module.
Sammons, R.P., Vezir, M., Moreno-Velasquez, L., Cano, G., Orlando, M., Sievers, M., Grasso, E., Metodieva, V.D., Kempter, R., Schmidt, H. and Schmitz, D.
Proceedings of the National Academy of Sciences of the United States of America 121 (6): e2312281120. 6 February 2024

A novel developmental critical period of orexinergic signaling in the primary visual thalamus.
Sanetra, A.M., Jeczmien-Lazur, J.S., Pradel, K., Klich, J.D., Palus-Chramiec, K., Janik, M.E., Bajkacz, S., Izowit, G., Nathan, C., Piggins, H.D., Delogu, A., Belle, M.D.C., Lewandowski, M.H. and Chrobok, L.
iScience 27 (7): 110352. 19 July 2024

Multiomic spatial landscape of innate immune cells at human central nervous system borders.
Sankowski, R., Süß, P., Benkendorff, A., Böttcher, C., Fernandez-Zapata, C., Chhatbar, C., Cahueau, J., Monaco, G., Gasull, A.D., Khavaran, A., Grauvogel, J., Scheiwe, C., Shah, M.J., Heiland, D.H., Schnell, O., Markfeld-Erol, F., Kunze, M., Zeiser, R., Priller, J. and Prinz, M.
Nature Medicine 30 (1): 186-198. January 2024

Targeting HFpEF: unlocking the potential of glucagon receptor blockade.
Santiago Padilla, L. and Schiattarella, G.G.
Circulation Research 135 (5): 629-631. 16 August 2024

Discovery of antimicrobial peptides in the global microbiome with machine learning.
Santos-Júnior, C.D., Torres, M.D.T., Duan, Y., Rodríguez Del Río, Á., Schmidt, T.S.B., Chong, H., Fullam, A., Kuhn, M., Zhu, C., Houseman, A., Somborski, J., Vines, A., Zhao, X.M., Bork, P., Huerta-Cepas, J., de la Fuente-Nunez, C. and Coelho, L.P.
Cell 187 (14): 3761-3778. 11 July 2024

Making sense of proprioception.
Santuz, A. and Zampieri, N.
Trends in Genetics 40 (1): 20-23. January 2024

Mapping DHPS evolvability: identification of novel evolutionarily critical sub-structure through evolutionary and structural analyses of DHPS.
Sanyal, D., Shivram, A., Banerjee, S., Uversky, V.N., Chivukula, A., Chattopadhyay, K. and Chowdhury, S.
bioRxiv : 2024.10.16.618629. 18 October 2024

Cell-type specific prediction of RNA stability from RNA-protein interactions.
Saran, S., Lebedeva, S., Hirsekorn, A. and Ohler, U.
bioRxiv : 2024.11.19.624283. 19 November 2024

CompassDock: Comprehensive accurate assessment approach for deep learning-based molecular docking in inference and fine-tuning.
Sariguen, A., Franke, V., Uyar, B. and Akalin, A.
arXiv : 2406.06841. 1 October 2024

Basal delamination during mouse gastrulation primes pluripotent cells for differentiation.
Sato, N., Rosa, V.S., Makhlouf, A., Kretzmer, H., Sampath Kumar, A., Grosswendt, S., Mattei, A.L., Courbot, O., Wolf, S., Boulanger, J., Langevin, F., Wiacek, M., Karpinski, D., Elosegui-Artola, A., Meissner, A., Zernicka-Goetz, M. and Shahbazi, M.N.
Developmental Cell 59 (10): 1252-1268. 20 May 2024

Regimens and response assessment in minimally invasive image-guided therapies for vascular malformations: insights from a large cohort study at a tertiary-care hospital.
Savic, G.D., Torsello, G.F., Frisch, A., Wieners, G., Fehrenbach, U., Auer, T.A., Lüdemann, W.M., Gebauer, B. and Savic, L.J.
Life 14 (10): 1270. 5 October 2024

Associations of C-reactive protein with depressive symptoms over time after mild to moderate ischemic stroke in the PROSCIS-B cohort.
Schaeff, V.L.K., Sperber, P.S., Piper, S.K., Giesers, N.K., Gertz, K., Heuschmann, P.U., Endres, M. and Liman, T.G.
Journal of Neurology 271 (2): 909-917. February 2024

TTF-1 status in early-stage lung adenocarcinoma is an independent predictor of relapse and survival superior to tumor grading.
Schallenberg, S., Dernbach, G., Dragomir, M.P., Schlachtenberger, G., Boschung, K., Friedrich, C., Standvoss, K., Ruff, L., Anders, P., Grohé, C., Randerath, W., Merkelbach-Bruse, S., Quaas, A., Heldwein, M., Keilholz, U., Hekmat, J.K., Rückert, C., Büttner, R., Horst, D., Klauschen, F. and Frost, N.
European Journal of Cancer 197 : 113474. January 2024

Twisted-plywood-like tissue formation in vitro. Does curvature do the twist?
Schamberger, B., Ehrig, S., Dechat, T., Spitzer, S., Bidan, C.M., Fratzl, P., Dunlop, J.W.C. and Roschger, A.
PNAS Nexus 3 (4): pgae121. April 2024

Review of preclinical data on hyperthermia treatment in lymphomas and its potential for clinical application.
Scharr, M.V., Damm, F., Krahl, P., Dieper, A., Veltsista, P.D., Hansch, A., Beck, M., Gerster, D., Giovannelli, A.C., Bullinger, L., Zips, D. and Ghadjar, P.
International Journal of Hyperthermia 41 (1): 2418427. 3 November 2024

Propagation of sharp wave-ripple activity in the mouse hippocampal CA3 subfield in vitro.
Schieferstein, N., Del Toro, A., Evangelista, R., Imbrosci, B., Swaminathan, A., Schmitz, D., Maier, N. and Kempter, R.
Journal of Physiology 602 (19): 5039-5059. 1 October 2024

Comparative single-cell analyses reveal evolutionary repurposing of a conserved gene program in bat wing development.
Schindler, M., Feregrino, C., Aldrovandi, S., Lo, B.W., Monaco, A.A., Ringel, A.R., Morales, A., Zehnder, T., Behncke, R.Y., Glaser, J., Barclay, A., Andrey, G., Kragesteen, B.K., Hägerling, R., Haas, S., Vingron, M., Ulitsky, I., Marti-Renom, M., Hechavarria, J., Fasel, N., Hiller, M., Lupianez, D.G., Mundlos, S. and Real, F.M.
bioRxiv : 2024.10.10.617585. 13 October 2024

Longitudinal change of serum NfL as disease activity biomarker candidate in MOGAD: a descriptive cohort study.
Schindler, P., Bellmann-Strobl, J., Kuhle, J., Wildemann, B., Jarius, S., Paul, F. and Ruprecht, K.
Multiple Sclerosis and Related Disorders 88 : 105729. August 2024

Inebilizumab for neuromyelitis optica spectrum disorders.
Schindler, P. and Paul, F.
touchREVIEWS in Neurology 20 (1): 16-22. 2024

Validity constraints for data analysis workflows.
Schintke, F., Belhajjame, K., De Mecquenem, N., Frantz, D., Guarino, V.E., Hilbrich, M., Lehmann, F., Missier, P., Sattler, R., Sparka, J.A., Speckhard, D.T., Stolte, H., Vu, A.D. and Leser, U.
Future Generation Computer Systems 157 : 82-97. August 2024

Decision-tree models indicative of microvascular invasion on MRI predict survival in patients with hepatocellular carcinoma following tumor ablation.
Schmidt, R., Hamm, C.A., Rueger, C., Xu, H., He, Y., Gottwald, L.A., Gebauer, B. and Savic, L.J.
Journal of Hepatocellular Carcinoma 11 : 1279-1293. 3 July 2024

The proteomic composition and organization of constitutive heterochromatin in mouse tissues.
Schmidt, A., Zhang, H., Schmitt, S., Rausch, C., Popp, O., Chen, J., Cmarko, D., Butter, F., Dittmar, G., Lermyte, F. and Cardoso, M.C.
Cells 13 (2): 139. 11 January 2024

SPIRE: a Searchable, Planetary-scale mIcrobiome REsource.
Schmidt, T.S.B., Fullam, A., Ferretti, P., Orakov, A., Maistrenko, O.M., Ruscheweyh, H.J., Letunic, I., Duan, Y., Van Rossum, T., Sunagawa, S., Mende, D.R., Finn, R.D., Kuhn, M., Pedro Coelho, L. and Bork, P.
Nucleic Acids Research 52 (D1): D777-D783. 5 January 2024

Oncogene inactivation-induced senescence facilitates tumor relapse.
Schmitt, P., Hönig, K., Milojkovic, A., Anders, K., Schröck, E., Sauer, S., Uyar, B., Akalin, A., Martínez-Reyes, I. and Blankenstein, T.
bioRxiv : 2024.07.13.603369. 17 July 2024

Cortical cellular encoding of thermotactile integration.
Schnepel, P., Paricio-Montesinos, R., Ezquerra-Romano, I., Haggard, P. and Poulet, J.F.A.
Current Biology 34 (8): 1718-1730. 22 April 2024

Muscle stiffness indicating mission crew health in space.
Schoenrock, B., Muckelt, P.E., Hastermann, M., Albracht, K., MacGregor, R., Martin, D., Gunga, H.C., Salanova, M., Stokes, M.J., Warner, M.B. and Blottner, D.
Scientific Reports 14 (1): 4196. 20 February 2024

Host weight, seasonality and anthropogenic factors contribute to parasite community differences between urban and rural foxes.
Scholz, C., Jarquín-Díaz, V.H., Planillo, A., Radchuk, V., Scherer, C., Schulze, C., Ortmann, S., Kramer-Schadt, S. and Heitlinger, E.
Science of the Total Environment 936 : 173355. August 2024

High-dose chemotherapy and autologous haematopoietic stem-cell transplantation in older, fit patients with primary diffuse large B-cell CNS lymphoma (MARTA): a single-arm, phase 2 trial.
Schorb, E., Isbell, L.K., Kerkhoff, A., Mathas, S., Braulke, F., Egerer, G., Röth, A., Schliffke, S., Borchmann, P., Brunnberg, U., Kroschinsky, F., Möhle, R., Rank, A., Wellnitz, D., Kasenda, B., Pospiech, L., Wendler, J., Scherer, F., Deckert, M., Henkes, E., von Gottberg, P., Gmehlin, D., Backenstraß, M., Jensch, A., Burger-Martin, E., Grishina, O., Fricker, H., Malenica, N., Orbán, A., Duyster, J., Ihorst, G., Finke, J. and Illerhaus, G.
Lancet Haematology 11 (3): e196-e205. March 2024

Open-ST: high-resolution spatial transcriptomics in 3D.
Schott, M., León-Periñán, D., Splendiani, E., Strenger, L., Licha, J.R., Pentimalli, T.M., Schallenberg, S., Alles, J., Samut Tagliaferro, S., Boltengagen, A., Ehrig, S., Abbiati, S., Dommerich, S., Pagani, M., Ferretti, E., Macino, G., Karaiskos, N. and Rajewsky, N.
Cell 187 (15): 3953-3972.e26. 25 July 2024

A standardized nomenclature design for systematic referencing and identification of animal cellular material.
Schrade, L., Mah, N., Bandrowski, A., Chen, Y., Dewender, J., Diecke, S., Hiepen, C., Lancaster, M.A., Marques-Bonet, T., Martinez, S., Mueller, S.C., Navara, C., Prigione, A., Seltmann, S., Sochacki, J., Sutcliffe, M.A., Zywitza, V., Hildebrandt, T.B. and Kurtz, A.
Animals 14 (11): 1541. 1 June 2024

Measurement of forces acting on single T-cell receptors.
Schrangl, L., Göhring, J., Kellner, F., Huppa, J.B. and Schütz, G.J.
In: Imaging cell signaling. Methods in Molecular Biology, 2800 . Humana New York, NY, New York, NY, USA, 147-165. ISBN 978-1-0716-3834-7 7 May 2024

TLIMB - a transfer learning framework for image analysis of the brain.
Schulz, M.A., Albrecht, J.P., Yilmaz, A., Koch, A., Kainmüller, D., Leser, U. and Ritter, K.
In: Workshops of the EDBT/ICDT 2024 Joint Conference, EDBT/ICDT-WS 2024, 25-28 March 2024, Paestum, Italy. 25 March 2024

Protein intake and type 2 diabetes mellitus: an umbrella review of systematic reviews for the evidence-based guideline for protein intake of the German Nutrition Society.
Schulze, M.B., Haardt, J., Amini, A.M., Kalotai, N., Lehmann, A., Schmidt, A., Buyken, A.E., Egert, S., Ellinger, S., Kroke, A., Kühn, T., Louis, S., Nimptsch, K., Schwingshackl, L., Siener, R., Zittermann, A., Watzl, B. and Lorkowski, S.
European Journal of Nutrition 63 (1): 33-50. February 2024

Apheresis therapies in MOGAD: a retrospective study of 117 therapeutic interventions in 571 attacks.
Schwake, C., Ladopoulos, T., Häußler, V., Kleiter, I., Ringelstein, M., Aktas, O., Kümpfel, T., Engels, D., Havla, J., Hümmert, M.W., Kretschmer, J.R., Tkachenko, D., Trebst, C., Ayroza Galvão Ribeiro Gomes, A.B., Pröbstel, A.K., Korporal-Kuhnke, M., Wildemann, B., Jarius, S., Pul, R., Pompsch, M., Krämer, M., Then Bergh, F., Gödel, C., Schwarz, P., Kowarik, M.C., Rommer, P.S., Vardakas, I., Senel, M., Winkelmann, A., Retzlaff, N., Weber, M.S., Husseini, L., Walter, A., Schindler, P., Bellmann-Strobl, J., Paul, F., Gold, R. and Ayzenberg, I.
Journal of Neurology, Neurosurgery, and Psychiatry 4 November 2024 (In Press)

Induction of circulating ABCB1 transcripts under platinum-based chemotherapy indicates poor prognosis and a bone micrometastatic phenotype in ovarian cancer patients.
Schwarz, F.M., Kuhlmann, J.D., Kämpfer, J., Klimova, A., Klotz, D.M., Freitag, L., Herrmann, P., Zinnow, V., Smith, J., Scheller, T., Walther, W., Wimberger, P. and Stein, U.
Molecular Cancer 23 (1): 174. 23 August 2024

MACC1 revisited - an in-depth review of a master of metastasis.
Schöpe, P.C., Torke, S., Kobelt, D., Kortüm, B., Treese, C., Dumbani, M., Güllü, N., Walther, W. and Stein, U.
Biomarker Research 12 (1): 146. 23 November 2024

Structural basis of Fusobacterium nucleatum adhesin Fap2 interaction with receptors on cancer and immune cells.
Schöpf, F., Marongiu, G.L., Milaj, K., Sprink, T., Kikhney, J., Moter, A. and Roderer, D.
bioRxiv : 2024.02.28.582045. 1 March 2024

ciRS-7 and miR-7 regulate ischemia-induced neuronal death via glutamatergic signaling.
Scoyni, F., Sitnikova, V., Giudice, L., Korhonen, P., Trevisan, D.M., Hernandez de Sande, A., Gomez-Budia, M., Giniatullina, R., Ugidos, I.F., Dhungana, H., Pistono, C., Korvenlaita, N., Välimäki, N.N., Kangas, S.M., Hiltunen, A.E., Gribchenko, E., Kaikkonen-Määttä, M.U., Koistinaho, J., Ylä-Herttuala, S., Hinttala, R., Venø, M.T., Su, J., Stoffel, M., Schaefer, A., Rajewsky, N., Kjems, J., LaPierre, M.P., Piwecka, M., Jolkkonen, J., Giniatullin, R., Hansen, T.B. and Malm, T.
Cell Reports 43 (3): 113862. 26 March 2024

Impairment of the adrenergic reserve associated with exercise intolerance in a murine model of heart failure with preserved ejection fraction.
Semmler, L., Jeising, T., Huettemeister, J., Bathe-Peters, M., Georgoula, K., Roshanbin, R., Sander, P., Fu, S., Bode, D., Hohendanner, F., Pieske, B., Annibale, P., Schiattarella, G.G., Oeing, C.U. and Heinzel, F.R.
Acta Physiologica 240 (4): e14124. April 2024

Routing of Kv7.1 to endoplasmic reticulum plasma membrane junctions.
Serrano-Novillo, C., Estadella, I., Navarro-Pérez, M., Oliveras, A., de Benito-Bueno, A., Socuéllamos, P.G., Bosch, M., Coronado, M.J., Sastre, D., Valenzuela, C., Soeller, C. and Felipe, A.
Acta Physiologica 240 (3): e14106. March 2024

Advancing research and treatment: an overview of clinical trials in myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) and future perspectives.
Seton, K.A., Espejo-Oltra, J.A., Giménez-Orenga, K., Haagmans, R., Ramadan, D.J. and Mehlsen, J.
Journal of Clinical Medicine 13 (2): 325. 6 January 2024

A mouse model of X-linked chronic granulomatous disease for the development of CRISPR/Cas9 gene therapy.
Sevim-Wunderlich, S., Dang, T., Rossius, J., Schnütgen, F. and Kuehn, R.
Genes 15 (6): 706. June 2024

lncRNA CDKN2B-AS1 regulates collagen expression.
Shi, W., Song, J., Weiner, J.M., Chopra, A., Dommisch, H., Beule, D. and Schaefer, A.S.
Human Genetics 143 (7): 907-919. July 2024

Safety and efficacy of glofitamab for relapsed/refractory large B-cell lymphoma in a multinational real-world study.
Shumilov, E., Wurm-Kuczera, R., Kerkhoff, A., Wang, M., Melchardt, T., Holtick, U., Bacher, U., Staber, P.B., Mazzeo, P., Leng, C., Böckle, D., Hölscher, A.S., Kauer, J., Rotter, N., Vucinic, V., Rudzki, J.D., Nachbaur, D., Bücklein, V.L., Schnetzke, U., Krämer, I., Wille, K., Hasse, A., von Tresckow, B., Hänel, M., Koenecke, C., Velazquez, G.F., Viardot, A., Schmid, C., Thurner, L., Wolf, D., Subklewe, M., Dreyling, M., Dreger, P., Dietrich, S., Keller, U., Jäger, U., Greil, R., Pabst, T., Lenz, G. and Chapuy, B.
Blood Advances : bloodadvances.2024014903. 11 December 2024 (In Press)

Do transformers and CNNs learn different concepts of brain age?
Siegel, N.T., Kainmueller, D., Deniz, F., Ritter, K. and Schulz, M.A.
bioRxiv : 2024.08.09.607321. 9 August 2024

Medium term (> 12 months) outcomes after laparoscopic hiatal hernia repair without conventional fundoplication using PH4B‑mesh implant (Phasix™) in 176 reflux patients: experience and technique.
Siemssen, B., Dahlke, P.M., Behrens, F., Hentschel, F. and Ibach, M.J.
Hernia 28 (5): 1641-1647. October 2024

Scale for the assessment and rating of ataxia (SARA): Übersetzung und kulturelle Anpassung an den deutschsprachigen Raum.
Silberbauer, J., Schidl, S., Diermayr, G., Schmitz-Hübsch, T. and Greisberger, A.
Wiener Medizinische Wochenschrift 174 (5-6): 111-122. April 2024

Cortical matrix remodeling as a hallmark of relapsing-remitting neuroinflammation in MR elastography and quantitative MRI.
Silva, R.V., Morr, A.S., Herthum, H., Koch, S.P., Mueller, S., Batzdorf, C.S., Bertalan, G., Meyer, T., Tzschätzsch, H., Kühl, A.A., Boehm-Sturm, P., Braun, J., Scheel, M., Paul, F., Infante-Duarte, C. and Sack, I.
Acta Neuropathologica 147 (1): 8. 4 January 2024

Huntingtin protein–protein interactions: From biology to therapeutic targets.
Silva Ramos, E., Greco, T.M., Cristea, I.M. and Wanker, E.E.
In: Huntington's Disease. Elsevier, New York, NY, USA, 159-186. ISBN pub.1168955041 16 February 2024

From regulation of cell fate decisions towards patient-specific treatments, insights from mechanistic models of signalling pathways.
Simon, M., Konrath, F. and Wolf, J.
Current Opinion in Systems Biology 39 : 100533. December 2024

Das visuelle System als Modell in der translationalen Forschung [The visual system as a model in translational research].
Sindi, M., Oertel, F.C., Paul, F., Meuth, S.G. and Albrecht, P.
Klinische Neurophysiologie 55 (03): 139-146. September 2024

Cell swelling enhances ligand-driven β-adrenergic signaling.
Sirbu, A., Bathe-Peters, M., Kumar, J.L.M, Inoue, A., Lohse, M.J. and Annibale, P.
Nature Communications 15 (1): 7822. 7 September 2024

Cell swelling enhances canonical β-adrenergic signaling.
Sirbu, A., Bathe-Peters, M., Kumar, J.L.M., Inoue, A., Lohse, M. and Annibale, P.
bioRxiv : 2023.06.23.544496v5. 23 August 2024

Outcomes with intensive treatment for acute myeloid leukemia: an analysis of two decades of data from the HARMONY Alliance.
Sobas, M.A., Turki, A.T., Ramiro, A.V., Sánchez, A.H., Elicegui, J.M., González, T., Melchor, R.A., Abáigar, M., Tur, L., Dall'Olio, D., Sträng, E., Tettero, J.M., Castellani, G., Benner, A., Döhner, K., Thiede, C., Metzeler, K.H., Haferlach, T., Damm, F., Ayala, R., Martínez-López, J., Mills, K.I., Sierra, J., Lehmann, S., Porta, M.G.D., Mayer, J., Reinhardt, D., Medina, R.V., Schulze-Rath, R., Barbus, M., Hernández-Rivas, J.M., Huntly, B.J.P., Ossenkoppele, G., Döhner, H. and Bullinger, L.
Haematologica 7 November 2024 (In Press)

Architecture of the Sap S-layer of Bacillus anthracis revealed by integrative structural biology.
Sogues, A., Leigh, K., Halingstad, E.V., Van der Verren, S.E., Cecil, A.J., Fioravanti, A., Pak, A.J., Kudryashev, M. and Remaut, H.
Proceedings of the National Academy of Sciences of the United States of America 121 (51): e2415351121. 17 December 2024

Targeted H3K9 acetylation at lncSox1 promoter by cell type-specific epigenome editing promotes intermediate progenitor proliferation in developing mouse cortex.
Sokpor, Godwin, Ulmke, P.A., Nguyen, H.D., Pham, L., Kakani, P., Chu, V.T., Arnold, S.J., Brand-Saberi, B., Nguyen, H.P. and Tuoc, T.
bioRxiv : 2024.11.05.621758. 5 November 2024

Pyjacker identifies enhancer hijacking events in acute myeloid leukemia including MNX1 activation via deletion 7q.
Sollier, E., Riedel, A., Toprak, U.H., Wierzbinska, J.A., Weichenhan, D., Schmid, J.P., Hakobyan, M., Touzart, A., Jahn, E., Vick, B., Brown-Burke, F., Kelly, K., Kelekci, S., Pejkovska, A., Goyal, A., Baehr, M., Breuer, K., Chen, M.J.M., Llamazares-Prada, M., Hartmann, M., Schoenung, M., Correia, N., Trumpp, A., Abdullah, Y., Klingmueller, U., Mughal, S.S., Brors, B., Westermann, F., Schlesner, M., Vosberg, S., Herold, T., Greif, P.A., Pfeifer, D., Luebbert, M., Fischer, T., Heidel, F., Gebhard, C., Walter, W., Haferlach, T., Eisfeld, A.K., Mrozek, K., Nicolet, D., Bullinger, L., Smeenk, L., Erpelinck, C., Mulet-Lazaro, R., Delwel, R., Ernst, A., Scherer, M., Lutsik, P., Jeremias, I., Doehner, K., Doehner, H., Lipka, D.B. and Plass, C.
bioRxiv : 2024.09.11.611224. 13 September 2024

Angiotensin-(1-5) is a potent endogenous angiotensin AT(2)-receptor agonist.
Souza-Silva, I.M., Peluso, A.A., Elsaafien, K., Nazarova, A.L., Assersen, K.B., Rodrigues-Ribeiro, L., Mohammed, M., Rodrigues, A.F., Nawrocki, A., Johansen, L.A., Jensen, P., de Kloet, A.D., Krause, E.G., DelBorgo, M., Maslov, I., Widdop, R.E., Santos, R.A., Bader, M., Larsen, M.R., Verano-Braga, T., Katritch, V., Sumners, C. and Steckelings, U.M.
bioRxiv : 2024.04.05.588367v2. 18 April 2024

Telemonitoring for chronic heart failure: narrative review of the 20-year journey from concept to standard care in Germany.
Spethmann, S., Hindricks, G., Koehler, K., Stoerk, S., Angermann, C.E., Böhm, M., Assmus, B., Winkler, S., Mökel, M., Mittermaier, M., Lelgemann, M., Reuter, D., Bosch, R., Albrecht, A., von Haehling, S., Helms, T.M., Sack, S., Bekfani, T., Gröschel, J.W., Koehler, M., Melzer, C., Wintrich, J., Zippel-Schultz, B., Ertl, G., Vogelmeier, C., Dagres, N., Zernikow, J. and Koehler, F.
Journal of medical Internet research 26 : e63391. 4 December 2024

Targeting KDM1A in neuroblastoma with NCL-1 induces a less aggressive phenotype and suppresses angiogenesis.
Sprüssel, A., Suzuki, T., Miyata, N., Astrahantseff, K., Szymansky, A., Toedling, J., Thole-Kliesch, T.M., Ballagee, A., Lodrini, M., Künkele, A., Truss, M., Heukamp, L.C., Mathia, S., Hertwig, F., Rosenberger, C., Eggert, A., Deubzer, H.E. and Schulte, J.H.
Journal of Clinical Medicine 13 (20): 6081. October 2024

Lessons from a negative gene therapy trial for Duchenne muscular dystrophy.
Spuler, S., Borasio, G.D. and Grittner, U.
Nature Medicine 9 October 2024 (In Press)

Hypertensive disorders of pregnancy and cardiovascular disease risk.
Staff, A.C., Dechend, R. and Jacobsen, D.P.
In: Manual of Cardiovascular Disease in Women. Springer Nature Switzerland, Cham, Switzerland, 119-141. ISBN 978-3-031-65952-2 28 September 2024

Hypertensive disorders of pregnancy and long-term maternal cardiovascular risk: bridging epidemiological knowledge into personalized postpartum care and follow-up.
Staff, A.C., Costa, M.L., Dechend, R., Jacobsen, D.P. and Sugulle, M.
Pregnancy Hypertension 36 : 101127. June 2024

Antibodies and complement are key drivers of thrombosis.
Stark, K., Kilani, B., Stockhausen, S., Busse, J., Schubert, I., Tran, T.D., Gaertner, F., Leunig, A., Pekayvaz, K., Nicolai, L., Fumagalli, V., Stermann, J., Stephan, F., David, C., Müller, M.B., Heyman, B., Lux, A., da Palma Guerreiro, A., Frenzel, L.P., Schmidt, C.Q., Dopler, A., Moser, M., Chandraratne, Sue, von Brühl, M.L., Lorenz, M., Korff, T., Rudelius, M., Popp, O., Kirchner, M., Mertins, P., Nimmerjahn, F., Iannacone, M., Sperandio, M., Engelmann, B., Verschoor, A. and Massberg, S.
Immunity 57 (9): 2140-2156.e10. 10 September 2024

The challenges of research data management in cardiovascular science: a DGK and DZHK position paper-executive summary.
Steffens, S., Schröder, K., Krüger, M., Maack, C., Streckfuss-Bömeke, K., Backs, J., Backofen, R., Baeßler, B., Devaux, Y., Gilsbach, R., Heijman, J., Knaus, J., Kramann, R., Linz, D., Lister, A.L., Maatz, H., Maegdefessel, L., Mayr, M., Meder, B., Nussbeck, S.Y., Rog-Zielinska, E.A., Schulz, M.H., Sickmann, A., Yigit, G. and Kohl, P.
Clinical Research in Cardiology 113 (5): 672-679. May 2024

Cryosectioning-enabled super-resolution microscopy for studying nuclear architecture at the single protein level.
Stein, J., Ericsson, M., Nofal, M., Magni, L., Aufmkolk, S., McMillan, R.B., Breimann, L., Herlihy, C.P., Lee, S.D., Willemin, A., Wohlmann, J., Arguedas-Jimenez, L., Yin, P., Pombo, A., Church, G.M. and Wu, C.T.
bioRxiv : 2024.02.05.576943. 5 February 2024

Differences in anthropometric measures based on sex, age, and health status: findings from the German National Cohort (NAKO).
Stein, M.J., Fischer, B., Bohmann, P., Ahrens, W., Berger, K., Brenner, H., Günther, K., Harth, V., Heise, J.K., Karch, A., Klett-Tammen, C.J., Koch-Gallenkamp, L., Krist, L., Lieb, W., Meinke-Franze, C., Michels, K.B., Mikolajczyk, R., Nimptsch, K., Obi, N., Peters, A., Pischon, T., Schipf, S., Schmidt, B., Stang, A., Thierry, S., Willich, S.N., Wirkner, K., Leitzmann, M.F. and Sedlmeier, A.M.
Deutsches Arzteblatt International 121 : 207-13. 5 April 2024

Subcellular mRNA kinetic modeling reveals nuclear retention as rate-limiting.
Steinbrecht, D., Minia, I., Milek, M., Meisig, J., Blüthgen, N. and Landthaler, M.
Molecular Systems Biology 20 (12): 1346-1371. 2 December 2024

Systems biology approach uncovers candidates for liver-heart interorgan crosstalk in HFpEF.
Strocchi, S., Liu, L., Wang, R., Häseli, S.P., Capone, F., Bode, D., Nambiar, N., Eroglu, T., Santiago Padilla, L., Farrelly, C., Vacca, A., Mascagni, M., Oeing, C.U., Kintscher, U., Jung, S., Diezel, S.A., Liévano Contreras, S.V., Zhou, M., Seldin, M. and Schiattarella, G.G.
Circulation Research 135 (8): 873-876. 27 September 2024

Titin's cardiac-specific N2B element is critical to mechanotransduction during volume overload of the heart.
Strom, J., Bull, M., Gohlke, J., Saripalli, C., Methawasin, M., Gotthardt, M. and Granzier, H.
Journal of Molecular and Cellular Cardiology 191 : 40-49. June 2024

Central intra-lesional iron deposits as a possible novel imaging marker at 7 Tesla MRI in Susac Syndrome - an exploratory study.
Strunk, D., Sinnecker, T., Kleffner, I., Doerr, J., Ringelstein, M., Gross, C.C., Deuschl, C., Maderwald, S., Quick, H.H., Yamac, E., Wrede, K.H. and Kraemer, M.
BMC Medical Imaging 24 (1): 4. 2 January 2024

Therapy adherence after interdisciplinary tumour board discussion is associated with improved outcome in soft tissue sarcoma: a Charité Comprehensive Cancer Centre analysis.
Strönisch, A., Rau, D., Wittenberg, S., Kaul, D., Koulaxouzidis, G., Öllinger, R., von Laffert, M., Jarosch, A., Schäfer, F., Keilholz, U., Bullinger, L., Märdian, S., Striefler, J. and Flörcken, A.
International Journal of Cancer 16 October 2024 (In Press)

Intercellular extrachromosomal DNA copy-number heterogeneity drives neuroblastoma cell state diversity.
Stöber, M.C., Chamorro González, R., Brückner, L., Conrad, T., Wittstruck, N., Szymansky, A., Eggert, A., Schulte, J.H., Koche, R.P., Henssen, A.G., Schwarz, R.F. and Haase, K.
Cell Reports 43 (9): 114711. 24 September 2024

Molecular subtyping of head and neck cancer - Clinical applicability and correlations with morphological characteristics.
Stögbauer, F., Otto, R., Jöhrens, K., Tinhofer, I., Keilholz, U., Poremba, C., Keller, U., Leser, U., Weichert, W., Boxberg, M. and Klinghammer, K.
Oral Oncology 149 : 106678. February 2024

Brain lesion characteristics in Chinese multiple sclerosis patients: a 7-T MRI cohort study.
Su, L., Zhang, Z., Gao, C., Guo, A., Zhang, M., Shi, X., Liu, X., Song, T., Xu, W., Wang, H., Kuchling, J., Jing, J., Tian, D.C., Liu, Y., Duan, Y., Paul, F. and Shi, F.D.
Annals of Clinical and Translational Neurology 22 November 2024 (In Press)

Herpes simplex virus type 1 modifies the protein composition of extracellular vesicles to promote neurite outgrowth and neuroinfection.
Sun, G., Kropp, K.A., Kirchner, M., Plückebaum, N., Selich, A., Serrero, M., Dhingra, A., Cabrera, J.R., Ritter, B., Bauerfeind, R., Wyler, E., Landthaler, M., Schambach, A., Sodeik, B., Mertins, P. and Viejo-Borbolla, A.
mBio 15 (2): e0330823. 14 February 2024

Intermittent fasting and health outcomes: an umbrella review of systematic reviews and meta-analyses of randomised controlled trials.
Sun, M.L., Yao, W., Wang, X.Y., Gao, S., Varady, K.A., Forslund, S.K., Zhang, M., Shi, Z.Y., Cao, F., Zou, B.J., Sun, M.H., Liu, K.X., Bao, Q., Xu, J., Qin, X., Xiao, Q., Wu, L., Zhao, Y.H., Zhang, D.Y., Wu, Q.J. and Gong, T.T
EClinicalMedicine 70 : 102519. April 2024

EU-LIFE charter of independent life science research institutes.
Superti-Furga, G., Agostinho, M., Bury, J., Cook, S., Durinx, C., Ender, A., van Luenen, H., Lund, A.H., Medema, R.H., Miączyńska, M., Nickel, D., Pelicci, P.G., Puisieux, A., Ripatti, S., Sander, M., Schubeler, D., Serrano, L., Sommer, T., Sonne-Hansen, K., Tomančák, P., Vives, J., Vontas, J. and Bettencourt-Dias, M.
FEBS Letters 598 (7): 719-724. April 2024

Macrocephaly and digital anomalies expand the phenotypic spectrum of PGAP2 variants in hyperphosphatasia with impaired intellectual development syndrome 3 (HPMRS3).
Susgun, S., Ben-Mahmoud, A., Rüschendorf, F., Ku, B., Hussain, S.I., Schulz, S., Puk, O., Biskup, S., Labonne, J.D.J., Don, D.W., Gupta, V., Choi, T.I., Khan, S., Wasif, N., Lacassie, Y., Layman, L.C., Ugur Iseri, S.A., Kim, C.H. and Kim, H.G.
Human Mutation 2024 : 1-13. 5 January 2024

Interleukin 11 therapy causes acute left ventricular dysfunction.
Sweeney, M., O’Fee, K., Villanueva-Hayes, C., Rahman, E., Lee, M., Tam, C.N., Pascual-Navarro, E., Maatz, H., Lindberg, E.L., Vanezis, K., Ramachandra, C.J., Andrew, Iv., Jennings, E.R., Lim, W.W., Widjaja, A.A., Carling, D., Hausenloy, D.J., Hubner, N., Barton, P.J.R. and Cook, S.A.
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Plasma NGAL levels in stable kidney transplant recipients and the risk of allograft loss.
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Nephrology Dialysis Transplantation 39 (3): 483-495. March 2024

A single dose of cocaine rewires the 3D genome structure of midbrain dopamine neurons.
Szabó, D., Franke, V., Bianco, S., Batiuk, M.Y., Paul, E.J., Kukalev, A., Pfisterer, U.G., Irastorza-Azcarate, I., Chiariello, A.M., Demharter, S., Zea-Redondo, L., Lopez-Atalaya, J.P., Nicodemi, M., Akalin, A., Khodosevich, K., Ungless, M.A., Winick-Ng, W. and Pombo, A.
bioRxiv : 2024.05.10.593308. 12 May 2024

Antibiotic-perturbed microbiota and the role of probiotics.
Szajewska, H., Scott, K.P., de Meij, T., Forslund-Startceva, S.K., Knight, R., Koren, O., Little, P., Johnston, B.C., Łukasik, J., Suez, J., Tancredi, D.J. and Sanders, M.E.
Nature Reviews Gastroenterology & Hepatology 11 December 2024 (In Press)

The STRING database in 2025: protein networks with directionality of regulation.
Szklarczyk, D., Nastou, K., Koutrouli, M., Kirsch, R., Mehryary, F., Hachilif, R., Hu, D., Peluso, M.E., Huang, Q., Fang, T., Doncheva, N.T., Pyysalo, S., Bork, P., Jensen, L.J. and von Mering, C.
Nucleic Acids Research 18 November 2024 (In Press)

Piezo2 voltage-block regulates mechanical pain sensitivity.
Sánchez-Carranza, O., Chakrabarti, S., Kühnemund, J., Schwaller, F., Bégay, V., García-Contreras, J.A., Wang, Lin and Lewin, G.R.
Brain 147 (10): 3487-3500. October 2024

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Surface modification of lipid nanoparticles for gene therapy.
Tafech, B., Mohabatpour, F. and Hedtrich, S.
Journal of Gene Medicine 26 (1): e3642. January 2024

Exploring mechanisms of lipid nanoparticle-mucus interactions in healthy and cystic fibrosis conditions.
Tafech, B., Rokhforouz, M.R., Leung, J., Sung, M.M., Lin, P.J., Sin, D.D., Lauster, D., Block, S., Quon, B.S., Tam, Y., Cullis, P., Feng, J.J. and Hedtrich, S.
Advanced Healthcare Materials 13 (18): e2304525. 17 July 2024

Protein biomarkers of adverse clinical features and events in sarcomeric hypertrophic cardiomyopathy.
Tahir, U.A., Kolm, P., Kwong, R.Y., Desai, M.Y., Dolman, S.F., Deng, S., Appelbaum, E., Desvigne-Nickens, P., DiMarco, J.P., Tiwari, G., Friedrich, M.G., Zelaya-Portillo, J.H., Jerosch-Herold, M., Kim, D.Y., Maron, M.S., Piechnik, S.K., Schulz-Menger, J., Watkins, H., Weintraub, W.S., Neubauer, S., Kramer, C.M., Jarolim, P., Gerszten, R.E. and Ho, C.Y.
Circulation Heart Failure 17 (12): e011707. December 2024

DNA virus infections shape transposable elements activity in vitro and in vivo.
Tan, J., Franke, V., Neugebauer, E., Lagisquet, J., Kuderna, A.K., Walter, S., Landthaler, M., Ensser, A., Stamminger, T., Gramberg, T., Akalin, A., Wyler, E. and Full, F.
bioRxiv : 2024.04.18.589901. 19 April 2024

Targeting complement C3a receptor resolves mitochondrial hyperfusion and subretinal microglial activation in progranulin-deficient frontotemporal dementia.
Tan, L.X., Oertel, F.C., Cheng, A., Cobigo, Y., Keihani, A., Bennett, D.J., Abdelhak, A., Montes, S.C., Chapman, M., Chen, R.Y., Cordano, C., Ward, M.E., Casaletto, K., Kramer, J.H., Rosen, H.J., Boxer, A., Miller, B.L., Green, A.J., Elahi, F.M. and Lakkaraju, A.
bioRxiv : 2024.05.29.595206. 1 June 2024

In vivo monitoring of renal tubule volume fraction using dynamic parametric MRI.
Tasbihi, E., Gladytz, T., Millward, J.M., Periquito, J.S., Starke, L., Waiczies, S., Cantow, K., Seeliger, E. and Niendorf, T.
Magnetic Resonance in Medicine 91 (6): 2532-2545. June 2024

Arabidopsis uses a molecular grounding mechanism and a biophysical circuit breaker to limit floral abscission signaling.
Taylor, I.W., Patharkar, O.R., Mijar, M., Hsu, C.W., Baer, J., Niederhuth, C.E., Ohler, U., Benfey, P.N. and Walker, J.C.
Proceedings of the National Academy of Sciences of the United States of America 121 (44): e2405806121. 29 October 2024

Protective role of the HSP90 inhibitor, STA-9090, in lungs of SARS-CoV-2-infected Syrian golden hamsters.
Teixeira Alves, L.G., Baumgardt, M., Langner, C., Fischer, M., Maria Adler, J., Bushe, J., Firsching, T.C., Mastrobuoni, G., Grobe, J., Hoenzke, K., Kempa, S., Gruber, A.D., Hocke, A.C., Trimpert, J., Wyler, E. and Landthaler, M.
BMJ Open Respiratory Research 11 (1) 29 February 2024

Precision fMRI and cluster-failure in the individual brain.
Tellez Ceja, I.F., Gladytz, T., Starke, L., Tabelow, K., Niendorf, T. and Reimann, H.M.
Human Brain Mapping 45 (12): e26813. 15 August 2024

RNF20-mediated transcriptional pausing and VEGFA splicing orchestrate vessel growth.
Tetik-Elsherbiny, N., Elsherbiny, A., Setya, A., Gahn, J., Tang, Y., Gupta, P., Dou, Y., Serke, H., Wieland, T., Dubrac, A., Heineke, J., Potente, M., Cordero, J., Ola, R. and Dobreva, G.
Nature Cardiovascular Research 3 (10): 1199-1216. October 2024

Acute myeloid leukemia: does sex matter?
Tettero, J.M., Cloos, J. and Bullinger, L.
Leukemia 38 (11): 2329-2331. November 2024

New phenanthrenequinones from Cymbidium ensifolium roots and their anti-inflammatory activity on lipopolysaccharide-activated BV2 microglial cells.
Thant, M.T., Hasriadi, H., Poldorn, P., Jungsuttiwong, S., Rojsitthisak, P., Böttcher, C., Towiwat, P. and Sritularak, B.
RSC Advances 14 (39): 28390-28400. 5 September 2024

New phenolic glycosides from Coelogyne fuscescens Lindl. var. brunnea and their cytotoxicity against human breast cancer cells.
Thant, M.T., Bhummaphan, N., Wuttiin, J., Puttipanyalears, C., Chaichompoo, W., Rojsitthisak, P., Punpreuk, Y., Böttcher, C., Likhitwitayawuid, K. and Sritularak, B.
ACS Omega 9 (7): 7679−7691. 20 February 2024

Review: Opportunities and barriers for omics-based biomarker discovery in steatotic liver diseases.
Thiele, M., Villesen, I.., Niu, L., Johansen, S., Sulek, K., Nishijima, S., Van Espen, L., Keller, M., Israelsen, M., Suvitaival, T., de Zawadzki, A., Juel, H.B., Brol, M.J., Stinson, S.E., Huang, Y., Alvarez Silva, M.C., Kuhn, M., Anastasiadou, E., Leeming, D.J., Karsdal, M., Matthijnssens, J., Arumugam, M., Dalgaard, L.T., Legido-Quigley, C., Mann, M., Trebicka, J., Bork, P., Jensen, L.J., Hansen, T. and Krag, A.
Journal of Hepatology 81 (2): 345-359. August 2024

A systematic review of observational studies on the association between diet quality patterns and visceral adipose tissue.
Thimm, A., Maskarinec, G., Guillermo, C., Nimptsch, K. and Pischon, T.
British Journal of Nutrition 12 November 2024 (In Press)

Genome-wide screening identifies Trim33 as an essential regulator of dendritic cell differentiation.
Tiniakou, I., Hsu, P.F., Lopez-Zepeda, L.S., Garipler, G., Esteva, E., Adams, N.M., Jang, G., Soni, C., Lau, C.M., Liu, F., Khodadadi-Jamayran, A., Rodrick, T.C., Jones, D., Tsirigos, A., Ohler, U., Bedford, M.T., Nimer, S.D., Kaartinen, V., Mazzoni, E.O. and Reizis, B.
Science Immunology 9 (94): eadi1023. 12 April 2024

Immune response and metastasis-links between the metastasis driver MACC1 and cancer immune escape strategies.
Torke, S., Walther, W. and Stein, U.
Cancers 16 (7): 1330. 28 March 2024

Proteomic insights into circadian transcription regulation: novel E-box interactors revealed by proximity labeling.
Torres, M., Kirchner, M., Marks, C.G., Mertins, P. and Kramer, A.
Genes & Development 38 (21-24): 1020-1032. November 2024

Cellular landscape of adrenocortical carcinoma at single-nuclei resolution.
Tourigny, D.S., Altieri, B., Secener, A.K., Sbiera, S., Schauer, M.P., Arampatzi, P., Herterich, S., Sauer, S., Fassnacht, M. and Ronchi, C.L.
Molecular and Cellular Endocrinology 590 : 112272. 1 September 2024

Long-term follow-up of the prospective randomized AATT study (autologous or allogeneic transplantation in patients with peripheral T-cell lymphoma).
Tournilhac, O., Altmann, B., Friedrichs, B., Bouabdallah, K., Leclerc, M., Cartron, G., Turlure, P., Reimer, P., Wagner-Drouet, E., Sanhes, L., Houot, R., Roussel, M., Kroschinsky, F., Dreger, P., Viardot, A., de Leval, L., Rosenwald, A., Gaulard, P., Wulf, G., Villate, A., Latiere, C., Elmaagacli, A., Glass, B., Poeschel, V., Damaj, G., Sibon, D., Durot, E., Bilger, K., Banos, A., Haenel, M., Dreyling, M., Keller, U., Tiab, M., Drenou, B., Cornillon, J., Nguyen, S., Robin, M., Nickelsen, M., Trümper, L., Lenz, G., Ziepert, M. and Schmitz, N.
Journal of Clinical Oncology 42 (32): 3788-3794. 10 November 2024

In vivo CRISPR/Cas9-mediated screen reveals a critical function of TFDP1 and E2F4 transcription factors in hematopoiesis.
Tran, N.T., Graf, R., Acevedo-Ochoa, E., Trombke, J., Weber, T., Sommermann, T., Salomon, C., Kühn, R., Rajewsky, K. and Chu, V.T.
Leukemia 38 (9): 2003-2015. September 2024

A quantitative multi-parameter mapping protocol standardized for clinical research in multiple sclerosis.
Trang, H., Hartung, T.J., Chen, Q., Hetzer, S., Chien, C., Sperber, P.S., Schmitz-Hübsch, T., Asseyer, S., Rust, R., Mewes, D., Anderhalten, L., Sy, M., Brandt, A.U., Finke, C. and Paul, F.
Scientific Reports 14 (1): 30481. 16 December 2024

Comparable CD8(+) T-cell responses to SARS-CoV-2 vaccination in single-cell transcriptomics of recently allogeneic transplanted patients and healthy individuals.
Tranter, Eva, Frentsch, Marco, Hütter-Krönke, Marie Luise, Vuong, Giang Lam, Busch, David, Loyal, Lucie, Henze, Larissa, Rosnev, Stanislav, Blau, Igor-Wolfgang, Thiel, Andreas, Beule, D., Bullinger, L., Obermayer, B. and Na, I.K.
Journal of Medical Virology 96 (3): e29539. March 2024

The influence of post-processing software on quantitative results in 4D flow cardiovascular magnetic resonance examinations.
Trauzeddel, R.F., Müller, M., Demir, A., Wiesemann, S., Daud, E., Schmitter, S., Viezzer, D., Hadler, T. and Schulz-Menger, J.
Frontiers in Cardiovascular Medicine 11 : 1465554. 27 September 2024

AI-guided pipeline for protein-protein interaction drug discovery identifies an SARS-CoV-2 inhibitor.
Trepte, P., Secker, C., Olivet, J., Blavier, J., Kostova, S., Maseko, S.B., Minia, I., Silva Ramos, E., Cassonnet, P., Golusik, S., Zenkner, M., Beetz, S., Liebich, M.J., Scharek, N., Schutz, A., Sperling, M., Lisurek, M., Wang, Y., Spirohn, K., Hao, T., Calderwood, M.A., Hill, D.E., Landthaler, M., Choi, S.G., Twizere, J.C., Vidal, M. and Wanker, E.E.
Molecular Systems Biology 20 (4): 428-457. 2 April 2024

Robust detection of clinically relevant features in single-cell RNA profiles of patient-matched fresh and formalin-fixed paraffin-embedded (FFPE) lung cancer tissue.
Trinks, A., Milek, M., Beule, D., Kluge, J., Florian, S., Sers, C., Horst, D., Morkel, M. and Bischoff, P.
Cellular Oncology 47 (4): 1221-1231. August 2024

Histone H3.3 lysine 9 and 27 control repressive chromatin at cryptic enhancers and bivalent promoters.
Trovato, M., Bunina, D., Yildiz, U., Fernandez-Novel Marx, N., Uckelmann, M., Levina, V., Perez, Y., Janeva, A., Garcia, B.A., Davidovich, C., Zaugg, J.B. and Noh, K.M.
Nature Communications 15 (1): 7557. 30 August 2024

KCNQ5 controls perivascular adipose tissue–mediated vasodilation.
Tsvetkov, D., Schleifenbaum, J., Wang, Y., Kassmann, M., Polovitskaya, M.M., Ali, M., Schütze, S., Rothe, M., Luft, F.C., Jentsch, T.J. and Gollasch, M.
Hypertension 81 (3): 561-571. March 2024

Bimodal dendritic processing in basket cells drives distinct memory-related oscillations.
Tzilivaki, A., Larkum, M.E. and Schmitz, D.
bioRxiv : 2024.09.11.612262. 14 September 2024

Plasmapheresis effectively abrogates severe liver toxicity of pegaspargase in a patient with acute lymphoblastic leukemia.
Tölle, M., Gökbuget, N., Habringer, S., Keller, U. and Schwartz, S.
Annals of Hematology 103 (8): 3269-3271. August 2024

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Modulating the mucosal drug delivery efficiency of polymeric nanogels tuning their redox response and surface charge.
Udabe, J., Muñoz‐Juan, A., Tafech, B., Orellano, M.S., Hedtrich, S., Laromaine, A. and Calderón, M.
Advanced Functional Materials 34 (45): 2407044. 5 November 2024

Regulation of lymphoid-myeloid lineage bias through Regnase-1/3-mediated control of Nfkbiz.
Uehata, T., Yamada, S., Ori, D., Vandenbon, A., Giladi, A., Jelinski, A., Murakawa, Y., Watanabe, H., Takeuchi, K., Toratani, K., Mino, T., Kiryu, H., Standley, D.M., Tsujimura, T., Ikawa, T., Kondoh, G., Landthaler, M., Kawamoto, H., Rodewald, H.R., Amit, I., Yamamoto, R., Miyazaki, M. and Takeuchi, O.
Blood 143 (3): 243-257. 18 January 2024

Microglial sex differences in innate high anxiety and modulatory effects of minocycline.
Ugursu, B., Sah, A., Sartori, S., Popp, O., Mertins, P., Dunay, I.R., Kettenmann, H., Singewald, N. and Wolf, S.A.
Brain Behavior and Immunity 119 : 465-481. July 2024

Quantification of microglial engulfment of synaptic material using flow cytometry.
Ugursu, B. and Wolf, S.A.
Journal of Visualized Experiments (207) 31 May 2024

Flexynesis: A deep learning framework for bulk multi-omics data integration for precision oncology and beyond.
Uyar, B., Savchyn, T., Wurmus, R., Sarigun, A., Shaik, M.M., Franke, V. and Akalin, A.
bioRxiv : 2024.07.16.603606. 18 July 2024

NMOSD and MOGAD: an evolving disease spectrum.
Uzawa, A., Oertel, F.C., Mori, M., Paul, F. and Kuwabara, S.
Nature Reviews Neurology 20 (10): 602-619. October 2024

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Lifestyle interventions in cardiometabolic HFpEF: dietary and exercise modalities.
Vacca, A., Wang, R., Nambiar, N., Capone, F., Farrelly, C., Mostafa, A., Sechi, L.A. and Schiattarella, G.G.
Heart Failure Reviews 16 September 2024 (In Press)

From gut to heart: role of indole-3-propionic acid in HFpEF.
Vacca, A. and Schiattarella, G.G.
Circulation Research 134 (4): 390-392. 16 February 2024

Loss of cardiac splicing regulator RBM20 is associated with early-onset atrial fibrillation.
Vad, O.B., Angeli, E., Liss, M., Ahlberg, G., Andreasen, L., Christophersen, I.E., Hansen, C.C., Møller, S., Hellsten, Y., Haunsoe, S., Tveit, A., Svendsen, J.H., Gotthardt, M., Lundegaard, P.R. and Olesen, M.S.
JACC: Basic to Translational Science 9 (2): 163-180. February 2024

Bifidobacterium and lactobacillus probiotics and gut dysbiosis in preterm infants: the PRIMAL randomized clinical trial.
Van Rossum, T., Haiß, A., Knoll, R.L., Marißen, J., Podlesny, D., Pagel, J., Bleskina, M., Vens, M., Fortmann, I., Siller, B., Ricklefs, I., Klopp, J., Hilbert, K., Meyer, C., Thielemann, R., Goedicke-Fritz, S., Kuntz, M., Wieg, C., Teig, N., Körner, T., Kribs, A., Hudalla, H., Knuf, M., Stein, A., Gille, C., Bagci, S., Dohle, F., Proquitté, H., Olbertz, D.M., Schmidt, E., Koch, L., Pirr, S., Rupp, J., Spiegler, J., Kopp, M.V., Göpel, W., Herting, E., Forslund, S.K., Viemann, D., Zemlin, M., Bork, P., Gehring, S., König, I.R., Henneke, P. and Härtel, C.
JAMA Pediatrics 178 (10): 985-995. October 2024

Poxviruses induce a nuclear environment in the cytoplasm to promote viral replication.
Veratti, P., Wyler, E., Read, C., Scherer, M., Tan, J., Walther, P., Wider, S., Weidl, D. and Full, F.
bioRxiv : 2024.11.21.624458. 22 November 2024

Expression of mGluR5 in pediatric Hodgkin and Non-Hodgkin lymphoma-a comparative analysis of immunohistochemical and clinical findings regarding the association between tumor and paraneoplastic neurological disease.
Viezens, I., Knierim, E., Deubzer, H.E., Hauptmann, K., Fassbender, J., Morales-Gonzalez, S., Kaindl, A.M., Schuelke, M. and Nikolaus, M.
Cancers 16 (13): 2452. 4 July 2024

Reslice3Dto2D: Introduction of a software tool to reformat 3D volumes into reference 2D slices in cardiovascular magnetic resonance imaging.
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BMC Research Notes 17 (1): 270. 17 September 2024

Post-hoc standardisation of parametric T1 maps in cardiovascular magnetic resonance imaging: a proof-of-concept.
Viezzer, D., Hadler, T., Gröschel, J., Ammann, C., Blaszczyk, E., Kolbitsch, C., Hufnagel, S., Kranzusch-Groß, R., Lange, S. and Schulz-Menger, J.
EBioMedicine 102 : 105055. April 2024

Cognitive reserve against Alzheimer's pathology is linked to brain activity during memory formation.
Vockert, N., Machts, J., Kleineidam, L., Nemali, A., Incesoy, E.I., Bernal, J., Schütze, H., Yakupov, R., Peters, O., Gref, D., Schneider, L.S., Preis, L., Priller, J., Spruth, E.J., Altenstein, S., Schneider, A., Fliessbach, K., Wiltfang, J., Rostamzadeh, A., Glanz, W., Teipel, S., Kilimann, I., Goerss, D., Laske, C., Munk, M.H., Spottke, A., Roy, N., Heneka, M.T., Brosseron, F., Wagner, M., Wolfsgruber, S., Dobisch, L., Dechent, P., Hetzer, S., Scheffler, K., Zeidman, P., Stern, Y., Schott, B.H., Jessen, F., Düzel, E., Maass, A. and Ziegler, G.
Nature Communications 15 (1): 9815. 13 November 2024

Simultaneous spectral illumination of microplates for high-throughput optogenetics and photobiology.
Vogt, A., Paulat, R., Parthier, D., Just, V., Szczepek, M., Scheerer, P., Xu, Q., Möglich, A., Schmitz, D., Rost, B.R. and Wenger, N.
Biological Chemistry 23 September 2024 (In Press)

Diagnostic value of inter-eye difference metrics on OCT for myelin oligodendrocyte glycoprotein antibody-associated optic neuritis.
Volpe, G., Jurkute, N., Girafa, G., Zimmermann, H.G., Motamedi, S., Bereuter, C., Pandit, L., D'Cunha, A., Yeaman, M.R., Smith, T.J., Cook, L.J., Brandt, A.U., Paul, F., Petzold, A. and Oertel, F.C.
Neurology Neuroimmunology & Neuroinflammation 11 (6): e200291. November 2024

Acute promyelocytic leukemia: long-term outcomes from the HARMONY project.
Voso, M.T., Guarnera, L., Lehmann, S., Döhner, K., Döhner, H., Platzbecker, U., Russell, N.H., Dillon, R.J., Thomas, I., Ossenkoppele, G.J., Haferlach, T., Vignetti, M., La Sala, E., Piciocchi, A., Fazi, P., Villaverde Ramiro, Á., Tur Giménez, L., Gurnari, C., Bullinger, L. and Hernandez, J.M.
Blood 8 November 2024 (In Press)

Sensitive dissection of a genomic regulatory landscape using bulk and targeted single-cell activation.
Vučićević, D., Hsu, C.W., Lopez Zepeda, L.S., Burkert, M., Hirsekorn, A., Bilić, I., Kastelić, N., Landthaler, M., Lacadie, S.A. and Ohler, U.
bioRxiv : 2024.09.12.612198. 12 September 2024

Spike-in enhanced phosphoproteomics uncovers synergistic signaling responses to MEK inhibition in colon cancer cells.
van Bentum, M., Klinger, B., Sieber, A., Lehmann, N., Haji, M., Naghiloo, S., Niquet, S., Mertins, P., Blüthgen, N. and Selbach, M.
bioRxiv : 2024.05.13.593849. 15 May 2024

Neuromuscular dysfunction in patient-derived FUS(R244RR)-ALS iPSC model via axonal downregulation of neuromuscular junction proteins.
von Kuegelgen, N., Ludwik, K., Mendonsa, S., Roemer, C., Becher, E., Breimann, L., Strauch, M., Mari, T., Mongellaz, S., Zuckerman, B., Grexa, N., Oliveras-Martinez, A., Woehler, A., Selbach, M., La Bella, V., Ulitsky, I. and Chekulaeva, M.
bioRxiv : 2024.08.17.607965. 17 August 2024

The (un)answered question: a data science powered music experiment.
von Kurnatowski, L., Wolff, B., Kernchen, S., Klapproth-Rieger, A., Heidrich, D., Haupt, C., Schreiber, A., Niendorf, T., Kosmider, A., Lobbes, M. and Hennecke, M.
Lecture Notes in Computer Science 14717 : 233-246. 2 June 2024

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Breakthrough infections in SARS-CoV-2-vaccinated multiple myeloma patients improve cross-protection against omicron variants.
Wagner, A., Garner-Spitzer, E., Auer, C., Gattinger, P., Zwazl, I., Platzer, R., Orola-Taus, M., Pichler, P., Amman, F., Bergthaler, A., Huppa, J.B., Stockinger, H., Zielinski, C.C., Valenta, R., Kundi, M. and Wiedermann, U.
Vaccines 12 (5): 518. 9 May 2024

The IsletTester mouse: an immunodeficient model with stable hyperglycemia for the study of human islets.
Waite, E.L., Tigue, M., Yu, M., Lahori, D., Kelly, K., May, C.L., Naji, A., Roman, J., Doliba, N., Avrahami, D., Nguyen-Ngoc, K.V., Sander, M., Glaser, B. and Kaestner, K.H.
Diabetes : db230887. 21 November 2024 (In Press)

Editorial: The MACC1 network in cancer.
Walther, W., Siegel, F. and Stein, U.
Frontiers in Oncology 13 : 1343812. 5 July 2024

TransTACs: novel heterobispecific antibodies for targeted protein degradation in cancer therapy.
Walther, W., Torke, S. and Stein, U.
Signal Transduction and Targeted Therapy 9 (1): 331. 26 November 2024

K48- and K63-linked ubiquitin chain interactome reveals branch- and length-specific ubiquitin interactors.
Waltho, A., Popp, O., Lenz, C., Pluska, L., Lambert, M., Dötsch, V., Mertins, P. and Sommer, T.
Life Science Alliance 7 (8): e202402740. August 2024

Generation and downstream analysis of single-cell and single-nuclei transcriptomes in brain organoids.
Wandres, M., Aigner, D., Kastelic, N., Boltengagen, A., Rybak-Wolf, A. and Rajewsky, N.
Journal of Visualized Experiments (205): e66225. 29 March 2024

Socio-affective communication in Tph2-deficient rat pups: communal nesting aggravates growth retardation despite ameliorating maternal affiliation deficits.
Wang, T., Homberg, J.R., Boreggio, L., Samina, M.C.F., Castro, R.C.R., Kolk, S.M., Alenina, N., Bader, M., Dai, J. and Wöhr, M.
Molecular Autism 15 (1): 50. 29 November 2024

Association of neurogranin and BACE1 with clinical cognitive decline in individuals with subjective cognitive decline.
Wang, X., Freiesleben, S.D., Schneider, L.S., Preis, L., Priller, J., Spruth, E.J., Altenstein, S., Schneider, A., Fliessbach, K., Wiltfang, J., Hansen, N., Jessen, F., Rostamzadeh, A., Duzel, E., Glanz, W., Incesoy, E.I., Buerger, K., Janowitz, D., Ewers, M., Perneczky, R., Rauchmann, B.S., Teipel, S.J., Kilimann, I., Goerss, D., Laske, C., Munk, M.H.J., Spottke, A., Roy-Kluth, N., Heneka, M.T., Brosseron, F., Wagner, M., Wolfsgruber, S., Ramirez, A., Kleineidam, L., Stark, M. and Peters, O.
Neurology 103 (8): e209806. 22 October 2024

Cross-platform clinical proteomics using the Charité Open Standard for Plasma Proteomics (OSPP).
Wang, Z., Farztdinov, V., Sinn, L.R., Tober-Lau, P., Ludwig, D., Freiwald, A., Amari, F., Textoris-Taube, K., Niewienda, A., Welter, A.S., Wei, A.A.J., Luckau, L., Kurth, F., Selbach, M., Hartl, J., Mülleder, M. and Ralser, M.
medRxiv : 2024.05.10.24307167. 10 May 2024

Anti-angiogenesis and anti-immunosuppression gene therapy through targeting COUP-TFII in an in situ glioblastoma mouse model.
Wang, F., Zhang, S., Sun, F., Chen, W., Liu, C., Dong, H., Cui, B., Li, L., Sun, C., Du, W., Liu, B., Fan, W., Deng, J., Schmitt, C.A., Wang, X. and Du, J.
Cancer Gene Therapy 31 (8): 1135-1150. August 2024

Differentiation between Parkinson’s disease and the parkinsonian subtype of multiple system atrophy using the magnetic resonance T1w/T2w ratio in the middle cerebellar peduncle.
Wang, J., Sugiyama, A., Yokota, H., Hirano, S., Yamamoto, T., Yamanaka, Y., Araki, N., Ito, S., Paul, F. and Kuwabara, S.
Diagnostics 14 (2): 201. January 2024

Tackling metabolic defects in HFpEF.
Wang, R. and Schiattarella, G.G.
European Heart Journal 45 (17): 1494-1496. 1 May 2024

Incidence of Parkinson’s disease in Germany based on prevalence data from 70 million patients of the statutory health insurance.
Wattenbach, C., Ellrichmann, G., Feinkohl, I., Voß, S. and Brinks, R.
BMC Neurology 24 (1): 221. 27 June 2024

The STRIPAK complex is required for radial sorting and laminin receptor expression in Schwann cells.
Weaver, M.R., Shkoruta, D., Pellegatta, M.R., Berti, C., Palmisano, M., Ferguson, S., Hurley, E., French, J., Patel, S., Belin, S., Selbach, M., Paul, F.E., Sim, F., Poitelon, Y. and Feltri, M.L.
bioRxiv : 2024.10.30.620661v1. 31 October 2024

Large‑scale assessment of physical activity in a population using high‑resolution hip‑worn accelerometry: the German National Cohort (NAKO).
Weber, A., van Hees, V.T., Stein, M.J., Gastell, S., Steindorf, K., Herbolsheimer, F., Ostrzinski, S., Pischon, T., Brandes, M., Krist, L., Marschollek, M., Greiser, K.H., Nimptsch, K., Brandes, B., Jochem, C., Sedlmeier, A.M., Berger, K., Brenner, H., Buck, C., Castell, S., Dörr, M., Emmel, C., Fischer, B., Flexeder, C., Harth, V., Hebestreit, A., Heise, J.K., Holleczek, B., Keil, T., Koch-Gallenkamp, L., Lieb, W., Meinke-Franze, C., Michels, K.B., Mikolajczyk, R., Kluttig, A., Obi, N., Peters, A., Schmidt, B., Schipf, S., Schulze, M.B., Teismann, H., Waniek, S., Willich, S.N., Leitzmann, M.F. and Baurecht, H.
Scientific Reports 14 (1): 7927. 4 April 2024

High-confidence calling of normal epithelial cells allows identification of a novel stem-like cell state in the colorectal cancer microenvironment.
Wei, T.T., Blanc, E., Peidli, S., Bischoff, P., Trinks, A., Horst, D., Sers, C., Blüthgen, N., Beule, D., Morkel, M. and Obermayer, B.
International Journal of Cancer 155 (9): 1655-1669. 1 November 2024

Altered enhancer-promoter interaction leads to MNX1 expression in pediatric acute myeloid leukemia with t(7;12)(q36;p13).
Weichenhan, D., Riedel, A., Sollier, E., Toprak, U.H., Hey, J., Breuer, K.H., Wierzbinska, J.A., Touzart, A., Lutsik, P., Bähr, M., Östlund, A., Nilsson, T., Jacobsson, S., Waraky, A., Behrens, Y.L., Göhring, G., Schlegelberger, B., Steinek, C., Harz, H., Leonhardt, H., Dolnik, A., Reinhardt, D., Bullinger, L., Palmqvist, L., Lipka, D.B. and Plass, C.
Blood Advances 8 (19): 5100-5111. 8 October 2024

Structural insights into the activation mechanism of antimicrobial GBP1.
Weismehl, M., Chu, X., Kutsch, M., Lauterjung, P., Herrmann, C., Kudryashev, M. and Daumke, O.
EMBO Journal 43 (4): 615-636. 15 February 2024

Combining Data Independent Acquisition with spike-in SILAC (DIA-SiS) improves proteome coverage and quantification.
Welter, A.S., Gerwien, M., Kerridge, R., Alp, K.M., Mertins, P. and Selbach, M.
Molecular & Cellular Proteomics 23 (10): 100839. October 2024

HLA-C*04:09N is expressed at the cell surface and triggers peptide-specific T-cell activation.
Welters, C., Welters, M.L., Stadler, S., Bullinger, L., Strobel, J., Hackstein, H., Dhamodaran, A., Blankenstein, T. and Hansmann, L.
Haematologica 109 (4): 1121-1127. April 2024

Oligonucleotide library screening for identification of virus-specific T-cell receptors.
Welters, M.L., Stadler, S., Anastasopoulou, V., Bullinger, L., Leisegang, M., Kammertöns, T., Welters, C. and Hansmann, L.
European Journal of Immunology 56 (6): e2350908. June 2024

CXCR4-gerichtete Theranostics in der Hämato-Onkologie: Möglichkeiten und Herausforderungen [CXCR4-targeted theranostics in hematooncology: opportunities and challenges].
Werner, R., Haug, A., Buske, C., Heidegger, S., Illert, A.L., Bassermann, F., Herhaus, P., Buck, A., Duell, J., Topp, M.S., Kraus, S., Einsele, H., Lapa, C., Raderer, M., Lenz, G., Habringer, S., von Tresckow, B. and Keller, U.
Nuklearmedizin 63 (2): 57-61. April 2024

IFT88 maintains sensory function by localising signalling proteins along Drosophila cilia.
Werner, S., Okenve-Ramos, P., Hehlert, P., Zitouni, S., Priya, P., Mendonça, S., Sporbert, A., Spalthoff, C., Göpfert, M.C., Jana, S.C. and Bettencourt-Dias, M.
Life Science Alliance 7 (5): e202302289. May 2024

TPT-004, a next-generation inhibitor of tryptophan hydroxylase, ameliorates pulmonary arterial hypertension in rats.
Wesolowski, R., Pleimes, D., Specker, E. and Bader, M.
Journal of the American Heart Association 13 (10): e034240. 21 May 2024

Inhibition of IL-11 signalling extends mammalian healthspan and lifespan.
Widjaja, A.A., Lim, W.W., Viswanathan, S., Chothani, S., Corden, B., Dasan, C.M., Goh, J.W.T., Lim, R., Singh, B.K., Tan, J., Pua, C.J., Lim, S.Y., Adami, E., Schafer, S., George, B.L., Sweeney, M., Xie, C., Tripathi, M., Sims, N.A., Hübner, N., Petretto, E., Withers, D.J., Ho, L., Gil, J., Carling, D. and Cook, S.A.
Nature 632 (8023): 157-165. 1 August 2024

Visualizing the modification landscape of the human 60S ribosomal subunit at close to atomic resolution.
Wiechert, F., Unbehaun, A., Sprink, T., Seibel, H., Bürger, J., Loerke, J., Mielke, T., Diebolder, C.A., Schacherl, M. and Spahn, C.M.T.
Nucleic Acids Research : gkae1191. 10 December 2024 (In Press)

Health service use among migrants in the German National Cohort - the role of birth region and language skills.
Wiessner, C., Licaj, S., Klein, J., Bohn, B., Brand, T., Castell, S., Führer, A., Harth, V., Heier, M., Heise, J.K., Holleczek, B., Jaskulski, S., Jochem, C., Koch-Gallenkamp, L., Krist, L., Leitzmann, M., Lieb, W., Meinke-Franze, C., Mikolajczyk, R., Moreno Velásquez, I., Obi, N., Pischon, T., Schipf, S., Thierry, S., Willich, S.N., Zeeb, H. and Becher, H.
International Journal of Public Health 69 : 1606377. 6 March 2024

A bistable inhibitory optoGPCR for multiplexed optogenetic control of neural circuits.
Wietek, J., Nozownik, A., Pulin, M., Saraf-Sinik, I., Matosevich, N., Gowrishankar, R., Gat, A., Malan, D., Brown, B.J., Dine, J., Imambocus, B.N., Levy, R., Sauter, K., Litvin, A., Regev, N., Subramaniam, S., Abrera, K., Summarli, D., Goren, E.M., Mizrachi, G., Bitton, E., Benjamin, A., Copits, B.A., Sasse, P., Rost, B.R., Schmitz, D., Bruchas, M.R., Soba, P., Oren-Suissa, M., Nir, Y., Wiegert, J.S. and Yizhar, O.
Nature Methods 21 (7): 1275-1287. July 2024

Clinical characterization and ancillary tests in Susac syndrome: a systematic review.
Wilf-Yarkoni, A., Zmira, O., Tolkovsky, A., Pflantzer, B., Gofrit, S.G., Kleffner, I., Paul, F. and Dörr, J.
Neurology Neuroimmunology & Neuroinflammation 11 (3): e200209. May 2024

Epigenetic regulatory layers in the 3D nucleus.
Willemin, A., Szabo, D. and Pombo, A.
Molecular Cell 84 (3): 415-428. 1 February 2024

Metformin modulates microbiota and improves blood pressure and cardiac remodeling in a rat model of hypertension.
Wimmer, M.I., Bartolomaeus, H., Anandakumar, H., Chen, C.Y., Vecera, V., Kedziora, S., Kamboj, S., Schumacher, F., Pals, S., Rauch, A., Meisel, J., Potapenko, O., Yarritu, A., Bartolomaeus, T.U.P., Samaan, M., Thiele, A., Stürzbecher, L., Geisberger, S.Y., Kleuser, B., Oefner, P.J., Haase, N., Löber, U., Gronwald, W., Forslund-Startceva, S.K., Muller, D.N. and Wilck, N.
Acta Physiologica 240 (11): e14226. November 2024

The cycling and aging mouse female reproductive tract at single-cell resolution.
Winkler, I., Tolkachov, A., Lammers, F., Lacour, P., Daugelaite, K., Schneider, N., Koch, M.L., Panten, J., Grünschläger, F., Poth, T., Ávila, B.M.d., Schneider, A., Haas, S., Odom, D.T. and Gonçalves, Â.
Cell 187 (4): 981-998. 15 February 2024

A realistic benchmark for differential abundance testing and confounder adjustment in human microbiome studies.
Wirbel, J., Essex, M., Forslund, S.K. and Zeller, G.
Genome Biology 25 (1): 247. 25 September 2024

A hypoxia-epigenetics axis drives EMT in pancreatic cancer.
Wirth, M. and Schneider, G.
Cancer Research 84 (11): 1739-1741. 1 June 2024

Gastric stem cell biology and helicobacter pylori infection.
Wizenty, J. and Sigal, M.
Current Topics in Microbiology and Immunology 444 : 1-24. 18 January 2024

Trophoblast side-population markers are dysregulated in preeclampsia and fetal growth restriction.
Wong, G.P., Hartmann, S., Simmons, D.G., Ellis, S., Nonn, O., Cannon, P., Nguyen, T.V., Nguyen, A., Bartho, L.A., Tong, S., Hannan, N.J. and Kaitu'u-Lino, T.J.
Stem Cell Reviews and Reports 20 (7): 1954-1970. October 2024

Metabolic control of adaptive β-cell proliferation by the protein deacetylase SIRT2.
Wortham, M., Ramms, B., Zeng, C., Benthuysen, J.R., Sai, S., Pollow, D.P., Liu, F., Schlichting, M., Harrington, A.R., Liu, B., Prakash, T.P., Pirie, E.C., Zhu, H., Baghdasarian, S., Auwerx, J., Shirihai, O.S. and Sander, M.
bioRxiv : 2024.02.24.581864. 28 February 2024

Intranasal delivery of low-dose anti-CD124 antibody enhances treatment of chronic rhinosinusitis with nasal polyps.
Wu, J., Jones, N., Chao, P.H., Chan, V., Hohenwarter, L., Wu, A., Bergamo, M., Rodríguez-Rodríguez, C., Saatchi, K., Liang, A., Häfeli, U.O., Tan, Z., Hedtrich, S., Andrew, L.J. and Li, S.D.
Biomaterials 308 : 122567. July 2024

Systemic delivery of proteins using novel peptides via the sublingual route.
Wu, J., Jones, N., Hohenwarter, L., Zhao, F., Chan, V., Tan, Z., Carlaw, T., Morin, T., Li, J., Kaur, T., Andrew, L.J., Ross, C.J.D., Hedtrich, S. and Li, S.D.
Journal of Controlled Release 368 : 290-302. April 2024

Single-cell RNA-sequencing of RVFV infection.
Wyler, E.
Methods in Molecular Biology 2824 : 361-372. August 2024

Pathogen dynamics and discovery of novel viruses and enzymes by deep nucleic acid sequencing of wastewater.
Wyler, E., Lauber, C., Manukyan, A., Deter, A., Quedenau, C., Teixeira Alves, L.G., Wylezich, C., Borodina, T., Seitz, S., Altmüller, J. and Landthaler, M.
Environment International 190 : 108875. August 2024

Spatial omics of acute myocardial infarction reveals a novel mode of immune cell infiltration.
Wünnemann, F., Sicklinger, F., Bestak, K., Nimo, J., Thiemann, T., Amrute, J., Nordbeck, M., Hartmann, N., Ibarra-Arellano, M.A., Tanevski, J., Heine, C., Frey, N., Lavine, K.J., Coscia, F., Saez-Rodriguez, J., Leuschner, F. and Schapiro, D.
bioRxiv : 2024.05.20.594955. 21 May 2024

X

Fetal growth restriction induced by maternal gal-3 deficiency is associated with altered gut-placenta axis.
Xie, Y., Zhao, F., Wang, Y., Borowski, S., Freitag, N., Tirado-Gonzalez, I., Hofsink, N., Matschl, U., Plösch, T., Garcia, M.G. and Blois, S.M.
Cell Death & Disease 15 (8): 575. 8 August 2024

PDGFRA is a conserved HAND2 effector during early cardiac development.
Xu, Y., Gehlot, R., Capon, S.J., Albu, M., Gretz, J., Bloomekatz, J., Mattonet, K., Vucicevic, D., Talyan, S., Kikhi, K., Günther, S., Looso, M., Firulli, B.A., Sanda, M., Firulli, A.B., Lacadie, S.A., Yelon, D. and Stainier, D.Y.R.
Nature Cardiovascular Research 3 (12): 1531-1548. December 2024

Y

Transient high salt intake promotes T-cell-mediated hypertensive vascular injury.
Yakoub, M., Rahman, M., Kleimann, P., Hoffe, J., Feige, M., Bouvain, P., Alter, C., Kluczny, J.I., Reidel, S., Nederlof, R., Hering, L., Argov, D., Arifaj, D., Kantauskaite, M., Meister, J., Kleinewietfeld, M., Rump, L.C., Jantsch, J., Flögel, U., Müller, D.N., Temme, S. and Stegbauer, J.
Hypertension 81 (12): 2415-2429. December 2024

Tumor associated microglia/macrophages utilize GPNMB to promote tumor growth and alter immune cell infiltration in glioma.
Yalcin, F., Haneke, H., Efe, I.E., Kuhrt, L.D., Motta, E., Nickl, B., Flüh, C., Synowitz, M., Dzaye, O., Bader, M. and Kettenmann, H.
Acta Neuropathologica Communications 12 (1): 50. 2 April 2024

Cellular atlases are unlocking the mysteries of the human body.
Yanai, I., Haas, S., Lippert, C. and Kretzmer, H.
Nature 635 (8039): 553-555. November 2024

Insights into therapeutic discovery through the Kelch domain structure of Keap1 at ambient temperature.
Yilmaz, M., Sever, B., Kutlu, Y., Gul, M., Okuducu, C., Tavli, S., Otsuka, M., Fujita, M., Haliloglu, T., Ciftci, H. and DeMirci, H.
bioRxiv : 2024.07.30.605796. 2 August 2024

Model guidance via explanations turns image classifiers into segmentation models.
Yu, X., Franzen, J., Samek, W., Höhne, M.M.C. and Kainmueller, D.
In: Second World Conference, xAI 2024, July 17–19, 2024, Valletta, Malta. 10 July 2024

Grainyhead-like 2 deficiency and kidney cyst growth in a mouse model.
Yurtdas, Z.Y., Kilic, E., Boor, P., Wyler, E., Landthaler, M., Jung, K. and Schmidt-Ott, K.M.
Journal of the American Society of Nephrology 35 (7): 838-853. July 2024

Z

The significant impact of experimental variables on the gut microbiome.
Zakarauskas-Seth, B.I. and Sawamiphak, S.
Cardiovascular Research 120 (10): 1100-1101. July 2024

Effects of a 6-week treadmill training with and without virtual reality on frailty in people with multiple sclerosis: Frailty rehabilitation in multiple sclerosis.
Zanotto, T., Galperin, I., Kumar, D.P., Mirelman, A., Yehezkyahu, S., Regev, K., Karni, A., Schmitz-Hübsch, T., Paul, F., Lynch, S.G., Akinwuntan, A.E., He, J., Troen, B.R., Devos, H., Hausdorff, J.M. and Sosnoff, J.J.
Archives of Physical Medicine and Rehabilitation 26 September 2024 (In Press)

Specific nanoprobe design for MRI: targeting laminin in the blood-brain barrier to follow alteration due to neuroinflammation.
Zapata-Acevedo, J.F., Losada-Barragán, M., Osma, J.F., Cruz, J.C., Reiber, A., Petry, K.G., Caillard, A., Sauldubois, A., Llamosa Pérez, D., Morillo Zárate, A.J., Muñoz, S.B., Daza Moreno, A., Silva, R.V., Infante-Duarte, C., Chamorro-Coral, W., González-Reyes, R.E. and Vargas-Sánchez, K.
PLoS ONE 19 (4): e0302031. 11 April 2024

Interlaboratory comparison of standardised metabolomics and lipidomics analyses in human and rodent blood using the MxP® Quant 500 kit.
Zararsiz, G.E., Lintelmann, J., Cecil, A., Kirwan, J., Poschet, G., Gegner, H.M., Schuchardt, S., Guan, X.L., Saigusa, D., Wishart, D., Zheng, J., Mandal, R., Adams, K., Thompson, J.W., Snyder, M.P., Contrepois, K., Chen, S., Ashrafi, N., Akyol, S., Yilmaz, A., Graham, S.F., O'Connell, T.M., Kalecký, K., Bottiglieri, T., Limonciel, A., Pham, H.T., Koal, T., Adamski, J. and Kastenmüller, G.
bioRxiv : 2024.11.13.619447. 14 November 2024

The global patient-reported outcomes for multiple sclerosis initiative: bridging the gap between clinical research and care – updates at the 2023 plenary event.
Zaratin, P., Samadzadeh, S., Seferoğlu, M., Ricigliano, V., Dos Santos Silva, J., Tunc, A., Brichetto, G., Coetzee, T., Helme, A., Khan, U., McBurney, R., Peryer, G., Weiland, H., Baneke, P., Battaglia, M.A., Block, V., Capezzuto, L., Carment, L., Cortesi, P.A., Cutter, G., Leocani, L., Hartung, H.P., Hillert, J., Hobart, J., Immonen, K., Kamudoni, P., Middleton, R., Moghames, P., Montalban, X., Peeters, L., Sormani, M.P., van Tonder, S., White, A., Comi, G. and Vermersch, P.
Frontiers in Neurology 15 : 1407257. 2024

The Calmodulin-interacting peptide Pcp4a regulates feeding state-dependent behavioral choice in zebrafish.
Zaupa, M., Nagaraj, N., Sylenko, A., Baier, H., Sawamiphak, S. and Filosa, A.
Neuron 112 (7): 1150-1164.e6. 3 April 2024

Lysozyme 1 inflamed CCR2(+) macrophages promote obesity-induced cardiac dysfunction.
Zhang, L., Han, H., Xu, A., Sathe, A., Fu, S., Zhao, J., Cai, W., Yang, Y., Liu, J., Bai, H., Ben, J., Zhu, X., Li, X., Yang, Q., Wang, Z., Gu, Y., Xing, C., Schiattarella, G.G., Cheng, S.Y., Zhang, H. and Chen, Q.
Circulation Research 135 (5): 596-613. 16 August 2024

Noninvasive assessment of diabetic kidney disease with MRI: hype or hope?
Zhao, K., Seeliger, E., Niendorf, T. and Liu, Z.
Journal of Magnetic Resonance Imaging 59 (5): 1494-1513. May 2024

Atypical KCNQ1/Kv7 channel function in a neonatal diabetes patient: hypersecretion preceded the failure of pancreatic β-cells.
Zhou, Z., Gong, M., Pande, A., Margineanu, A., Lisewski, U., Purfürst, B., Zhu, H., Liang, L., Jia, S., Froehler, S., Zeng, C., Kühnen, P., Khodaverdi, S., Krill, W., Röpke, T., Chen, W., Raile, K., Sander, M. and Izsvák, Z.
iScience 27 (7): 110291. 19 July 2024

Neighborhood-level inequalities and influencing factors of COVID-19 incidence in berlin based on Bayesian spatial modelling.
Zhuang, S., Wolf, K., Schmitz, T., Roth, A., Sun, Y., Savaskan, N. and Lakes, T.
Sustainable Cities and Society 104 : 105301. May 2024

DCGG: drug combination prediction using GNN and GAE.
Ziaee, S.S., Rahmani, H., Tabatabaei, M., Vlot, A.H.C. and Bender, A.
Progress in Artificial Intelligence 13 : 17-30. March 2024

Die Herausforderung der Lupusnephritis: aktuelle Erkenntnisse und Behandlungsansätze.
Zimmermann, J. and Schreiber, A.
Nephrologie aktuell 28 (6): 248-256. July 2024

Avacopan in anti-neutrophil cytoplasmic autoantibodies–associated vasculitis in a real-world setting.
Zimmermann, J., Sonnemann, J., Jabs, W.J., Schönermarck, U., Vielhauer, V., Bieringer, M., Schneider, U., Kettritz, R. and Schreiber, A.
Kidney International Reports 9 (9): 2803-2808. September 2024

Everolimus and mycophenolate mofetil effectively prevent GvHD in children with severe acute kidney injury undergoing allogeneic HSCT.
Zirngibl, F., Gebert, P., Materne, B., Launspach, M., Künkele, A., Hundsdoerfer, P., Cyrull, S., Deubzer, H.E., Kühl, J.S., Eggert, A., Lang, P., Oevermann, L., von Stackelberg, A. and Schulte, J.H.
medRxiv : 2024.03.14.24304155. 16 March 2024

Ö

Long-term impact of scheduled regular endoscopic interventions for patients with primary sclerosing cholangitis.
Özdirik, B., Veltzke-Schlieker, W., Nicklaus, J.M., Berger, H., Schmidt, D., Leonhardt, S., Penndorf, V., Adler, A., Müller, T., Wree, A., Tacke, F. and Sigal, M.
Hepatology Communications 8 (9): e0494. September 2024

Č

Transgenic rat with ubiquitous expression of angiotensin-(1-7)-producing fusion protein: a new tool to study the role of protective arm of the renin-angiotensin system in the pathophysiology of cardio-renal diseases.
Červenka, L., Husková, Z., Kikerlová, S., Gawrys, O., Vacková, Š., Škaroupková, P., Sadowski, J., Miklovič, M., Molnár, M., Táborský, M., Melenovský, V. and Bader, M.
Hypertension Research 13 November 2024 (In Press)

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