2026

Global quantification of mammalian gene expression noise.
Welter, Anna Sophie ORCID: https://orcid.org/0009-0003-9846-3889, Mutschler, Florian ORCID: https://orcid.org/0009-0002-0992-7171, Simon, Mareike ORCID: https://orcid.org/0000-0001-7213-9499, Giacomelli, Chiara ORCID: https://orcid.org/0000-0003-1466-1371, Branscheid, Ann-Christin, Manukyan, Artur ORCID: https://orcid.org/0000-0002-0441-9517, Teixeira Alves, Luiz Gustavo ORCID: https://orcid.org/0000-0002-5822-4168, Gerwien, Maximilian ORCID: https://orcid.org/0000-0002-2884-4155, Kerridge, Robert, Landthaler, Markus ORCID: https://orcid.org/0000-0002-1075-8734, Wolf, Jana ORCID: https://orcid.org/0000-0003-3254-5868 and Selbach, Matthias ORCID: https://orcid.org/0000-0003-2454-8751
bioRxiv : 2026.05.11.724258. 14 May 2026

Processed data and code for Manuscript: Global quantification of mammalian gene expression noise.
Welter, Anna Sopie ORCID: https://orcid.org/0009-0003-9846-3889, Mutschler, Florian ORCID: https://orcid.org/0009-0002-0992-7171, Simon, Mareike ORCID: https://orcid.org/0000-0001-7213-9499, Giacomelli, Chiara ORCID: https://orcid.org/0000-0003-1466-1371, Branscheid, Ann-Christin, Manukyan, Artur ORCID: https://orcid.org/0000-0002-0441-9517, Teixeira Alves, Luiz Gustavo ORCID: https://orcid.org/0000-0002-5822-4168, Gerwien, Maximilian ORCID: https://orcid.org/0000-0002-2884-4155, Kerridge, Robert, Landthaler, Markus ORCID: https://orcid.org/0000-0002-1075-8734, Wolf, Jana ORCID: https://orcid.org/0000-0003-3254-5868 and Selbach, Matthias ORCID: https://orcid.org/0000-0003-2454-8751
[Dataset] 14 May 2026

Autophagy selectively clears ER in TNF-α-induced muscle atrophy.
Dueren, Ursula K. ORCID: https://orcid.org/0009-0006-4407-9031, Wei, Alan An Jung ORCID: https://orcid.org/0000-0003-4255-9470, Gressler, A. Elisabeth ORCID: https://orcid.org/0000-0003-3229-1554, Rapp, Simon ORCID: https://orcid.org/0000-0002-5141-0611, Popp, Oliver ORCID: https://orcid.org/0000-0001-6240-4666, Kerridge, Robert, Buonomo, Viviana, Viviana, Paolo ORCID: https://orcid.org/0000-0002-9942-9389, Mertins, Philipp ORCID: https://orcid.org/0000-0002-2245-528X, Selbach, Matthias ORCID: https://orcid.org/0000-0003-2454-8751, Simon, Anna Katharina ORCID: https://orcid.org/0000-0002-4077-7995 and Sommer, Thomas ORCID: https://orcid.org/0000-0001-9990-5202
Autophagy Reports 5 (1): 2649064. 14 April 2026

Highlights from the Susan Lindquist School on Proteostasis-EMBO|FEBS Lecture Course, 16-19 September, 2025, Espoo, Finland.
van Weert, Emile, Giacomelli, Chiara ORCID: https://orcid.org/0000-0003-1466-1371, Stefani, Ioanna, Lopez-Bautista, Maria Li ORCID: https://orcid.org/0009-0000-5620-5644, Neumeier, Antonia-Viktoria, Paul, Pubali, Das, Anushka, Hari, Chetan and Gulgec, Ahmet Sadik ORCID: https://orcid.org/0000-0003-1172-8497
FEBS Letters 600 (3): 271-281. February 2026

C-COMPASS: a user-friendly neural network tool profiles cell compartments at protein and lipid levels.
Haas, Daniel T., Weindl, Daniel ORCID: https://orcid.org/0000-0001-9963-6057, Kakimoto, Pamela, Trautmann, Eva-Maria ORCID: https://orcid.org/0009-0002-0691-0489, Schessner, Julia P., Mao, Xia, Gerl, Mathias J. ORCID: https://orcid.org/0000-0002-8074-7221, Gerwien, Maximilian ORCID: https://orcid.org/0000-0002-2884-4155, Müller, Timo D., Klose, Christian, Cheng, Xiping, Hasenauer, Jan ORCID: https://orcid.org/0000-0002-4935-3312 and Krahmer, Natalie ORCID: https://orcid.org/0000-0003-4063-7367
Nature Methods 23 (1): 118-130. January 2026

2025

Cross-platform clinical proteomics using the Charité open standard for plasma proteomics (OSPP).
Wang, Ziyue ORCID: https://orcid.org/0000-0002-4121-4799, Farztdinov, Vadim, Sinn, Ludwig Roman, Tober-Lau, Pinkus ORCID: https://orcid.org/0000-0002-9148-3663, Ludwig, Daniela, Freiwald, Anja, Amari, Fatma, Textoris-Taube, Kathrin, Niewienda, Agathe, Welter, Anna Sophie ORCID: https://orcid.org/0009-0003-9846-3889, Wei, Alan An Jung ORCID: https://orcid.org/0000-0003-4255-9470, Luckau, Luise, Kurth, Florian ORCID: https://orcid.org/0000-0002-3807-473X, Selbach, Matthias ORCID: https://orcid.org/0000-0003-2454-8751, Hartl, Johannes ORCID: https://orcid.org/0000-0001-8470-5355, Mülleder, Michael ORCID: https://orcid.org/0000-0001-9792-3861 and Ralser, Markus ORCID: https://orcid.org/0000-0001-9535-7413
Nature Communications 16 (1): 11377. 23 December 2025

Additional file 10 of ERV3-MLT1 provides cis-regulatory elements for human placental functioning and are commonly dysregulated in human-specific preeclampsia.
Anwar, Rabia, Pande, Amit ORCID: https://orcid.org/0009-0008-0826-973X, Singh, Manvendra ORCID: https://orcid.org/0000-0002-8626-5418, Huang, Zhi ORCID: https://orcid.org/0000-0002-8993-4912, Hallett, Eve ORCID: https://orcid.org/0009-0002-8268-8074, Xie, Yiran, Gellhaus, Alexandra, Herse, Florian ORCID: https://orcid.org/0000-0002-9305-8134, Nonn, Olivia ORCID: https://orcid.org/0000-0001-6385-2866, Gauster, Martin, Raskó, Tamás, Selbach, Matthias ORCID: https://orcid.org/0000-0003-2454-8751, Verlohren, Stefan ORCID: https://orcid.org/0000-0003-3507-8636, Staff, Anne Cathrine, Dechend, Ralf ORCID: https://orcid.org/0000-0001-6636-3080, Pecks, Ulrich, Blois, Sandra M. ORCID: https://orcid.org/0000-0002-0434-2660, Hurst, Laurence D. and Izsvák, Zsuzsanna ORCID: https://orcid.org/0000-0002-2053-2384
[Dataset] 5 November 2025

ERV3-MLT1 provides cis-regulatory elements for human placental functioning and are commonly dysregulated in human-specific preeclampsia.
Anwar, Rabia, Pandey, Amit ORCID: https://orcid.org/0000-0002-8886-1694, Singh, Manvendra ORCID: https://orcid.org/0000-0002-8626-5418, Huang, Zhi ORCID: https://orcid.org/0000-0002-8993-4912, Hallett, Eve ORCID: https://orcid.org/0009-0002-8268-8074, Xie, Yiran, Gellhaus, Alexandra, Herse, Florian ORCID: https://orcid.org/0000-0002-9305-8134, Nonn, Olivia ORCID: https://orcid.org/0000-0001-6385-2866, Gauster, Martin, Raskó, Tamás, Selbach, Matthias ORCID: https://orcid.org/0000-0003-2454-8751, Verlohren, Stefan ORCID: https://orcid.org/0000-0003-3507-8636, Staff, Anne Cathrine, Dechend, Ralf ORCID: https://orcid.org/0000-0001-6636-3080, Pecks, Ulrich, Blois, Sandra M. ORCID: https://orcid.org/0000-0002-0434-2660, Hurst, Laurence D and Izsvák, Zsuzsanna ORCID: https://orcid.org/0000-0002-2053-2384
Genome Biology 26 (1): 364. 5 November 2025

Familial Alzheimer disease mutation in SORL1 impairs release of neurotrophic extracellular vesicles by microglia.
Sommer, Christian and Selbach, Matthias ORCID: https://orcid.org/0000-0003-2454-8751
[Dataset] 14 September 2025

Familial Alzheimer's disease mutation identifies novel role of SORLA in release of neurotrophic exosomes.
Juul-Madsen, Kristian ORCID: https://orcid.org/0000-0002-5309-5221, Rudolph, Ina-Maria ORCID: https://orcid.org/0000-0002-3903-0755, Gomes, Jemila P. ORCID: https://orcid.org/0009-0004-1027-8599, Meyer, Katrina ORCID: https://orcid.org/0000-0002-8244-6887, Ovesen, Peter L. ORCID: https://orcid.org/0000-0001-8801-4711, Gorniak-Walas, Malgorzata ORCID: https://orcid.org/0000-0003-1236-8622, Kokoli, Marianna ORCID: https://orcid.org/0000-0002-1411-3730, Telugu, Narasimha S. ORCID: https://orcid.org/0000-0003-4509-7056, vonTangen Sivertsen, Malthe, Febbraro, Fabia ORCID: https://orcid.org/0000-0001-8336-2776, Sutherland, Duncan S. ORCID: https://orcid.org/0000-0002-5045-9915, Palmfeldt, Johan ORCID: https://orcid.org/0000-0001-5585-639X, Diecke, Sebastian ORCID: https://orcid.org/0000-0002-5219-5992, Andersen, Olav M. ORCID: https://orcid.org/0000-0003-4226-3354, Selbach, Matthias ORCID: https://orcid.org/0000-0003-2454-8751 and Willnow, Thomas E. ORCID: https://orcid.org/0000-0001-9515-7921
Alzheimer's & Dementia 21 (9): e70591. 10 September 2025

Slice-PASEF: maximising ion utilisation in LC-MS proteomics.
Sinn, Ludwig R. ORCID: https://orcid.org/0000-0003-4692-0681, Szyrwiel, Lukasz ORCID: https://orcid.org/0000-0003-1983-2950, Grossmann, Justus, Lau, Kate, Faisst, Katharina, Qin, Di ORCID: https://orcid.org/0000-0002-9730-4072, Mutschler, Florian ORCID: https://orcid.org/0009-0002-0992-7171, Khoury, Luke ORCID: https://orcid.org/0000-0001-7794-6812, Leduc, Andrew ORCID: https://orcid.org/0000-0001-6234-0623, Ralser, Markus ORCID: https://orcid.org/0000-0001-9535-7413, Coscia, Fabian ORCID: https://orcid.org/0000-0002-2244-5081, Selbach, Matthias ORCID: https://orcid.org/0000-0003-2454-8751, Slavov, Nikolai ORCID: https://orcid.org/0000-0003-2035-1820, Nagaraj, Nagarjuna, Steger, Martin ORCID: https://orcid.org/0000-0003-1637-8190 and Demichev, Vadim ORCID: https://orcid.org/0000-0002-2424-9412
bioRxiv : 2022.10.31.514544v3. 2 September 2025

Retinoic acid-induced 2 deficiency impairs genomic stability in breast cancer.
Boettcher, Lena, Greimeier, Sarah, Borgmann, Kerstin, Mughal, Shabbir S, Ellinger, Bernhard, Bartkowiak, Kai, Zobiak, Bernd, Failla, Antonio V, Steffen, Pascal, Claus, Ellen, Besler, Katharina, Buccitelli, Christopher ORCID: https://orcid.org/0000-0002-2637-2131, Schaaf, Violetta, Ozga, Ann-Kathrin, Parretta, Simona, Schneegans, Svenja, Mansour, Wael Y, Korbel, Jan O, Schlueter, Hartmut, Brors, Benedikt, Pantel, Klaus, Wikman, Harriet and Werner, Stefan
Breast Cancer Research 27 (1): 137. 22 July 2025

Spike-in enhanced phosphoproteomics uncovers synergistic signaling responses to MEK inhibition in colon cancer cells.
van Bentum, M., Klinger, B. ORCID: https://orcid.org/0000-0003-0242-1506, Sieber, A. ORCID: https://orcid.org/0000-0001-6588-8547, Naghiloo, S. ORCID: https://orcid.org/0009-0001-7354-2930, Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Lehmann, N. ORCID: https://orcid.org/0009-0006-2588-2283, Haji, M., Niquet, S., Mertins, P. ORCID: https://orcid.org/0000-0002-2245-528X, Blüthgen, N. ORCID: https://orcid.org/0000-0002-0171-7447 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Nature Communications 16 (1): 4884. 27 May 2025

Familial Alzheimer disease mutation identifies novel role of SORLA in release of neurotrophic exosomes.
Juul-Madsen, K. ORCID: https://orcid.org/0000-0002-5309-5221, Rudolph, I.M. ORCID: https://orcid.org/0000-0002-3903-0755, Gomes, J.P., Meyer, K. ORCID: https://orcid.org/0000-0002-8244-6887, Ovesen, P.L. ORCID: https://orcid.org/0000-0001-8801-4711, Gorniak-Walas, M. ORCID: https://orcid.org/0000-0003-1236-8622, Kokoli, M. ORCID: https://orcid.org/0000-0002-1411-3730, Telugu, N.S. ORCID: https://orcid.org/0000-0003-4509-7056, Sivertsen, M.V.T., Sutherland, D., Palmfeldt, J.S, Diecke, S. ORCID: https://orcid.org/0000-0002-5219-5992, Andersen, O. ORCID: https://orcid.org/0000-0003-4226-3354, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Willnow, T.E. ORCID: https://orcid.org/0000-0001-9515-7921
bioRxiv : 2025.04.22.649924. 25 April 2025

An integrated landscape of mRNA and protein isoforms.
Kedan, A., Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Wang, M.R., Zhu, Q., Fang, L. ORCID: https://orcid.org/0000-0003-4502-1756, Chen, W. ORCID: https://orcid.org/0000-0003-3263-1627 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
bioRxiv : 2025.04.16.648713. 19 April 2025

Neuromuscular dysfunction in patient-derived FUS(R244RR)-ALS iPSC model via axonal downregulation of neuromuscular junction proteins.
von Kügelgen, N. ORCID: https://orcid.org/0000-0001-8116-9032, Ludwik, K.A. ORCID: https://orcid.org/0000-0002-9436-7270, Mendonsa, S. ORCID: https://orcid.org/0000-0001-9814-6662, Römer, C., Becher, E., Breimann, L. ORCID: https://orcid.org/0000-0001-7702-5749, Strauch, M., Mari, T. ORCID: https://orcid.org/0000-0001-6011-9386, Mongellaz, S., Zuckerman, B. ORCID: https://orcid.org/0000-0002-6216-011X, Efendic, F. ORCID: https://orcid.org/0000-0002-8462-0690, Grexa, N., Oliveras-Martinez, A. ORCID: https://orcid.org/0000-0002-5880-5245, Woehler, A. ORCID: https://orcid.org/0000-0001-5157-9313, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, La Bella, V., Ulitsky, I. ORCID: https://orcid.org/0000-0003-0555-6561 and Chekulaeva, M. ORCID: https://orcid.org/0000-0002-6868-7887
NAR Molecular Medicine 2 (2): ugaf005. April 2025

The STRIPAK complex is required for radial sorting and laminin receptor expression in Schwann cells.
Weaver, M.R., Shkoruta, D., Pellegatta, M., Berti, C., Palmisano, M., Ferguson, S., Hurley, E., French, J., Patel, S., Belin, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Paul, F.E. ORCID: https://orcid.org/0000-0001-5181-3122, Sim, F., Poitelon, Y. and Feltri, M.L.
Cell Reports 44 (3): 115401. 6 March 2025

2024

Combining Data Independent Acquisition with spike-in SILAC (DIA-SiS) improves proteome coverage and quantification.
Welter, A.S. ORCID: https://orcid.org/0009-0003-9846-3889, Gerwien, M. ORCID: https://orcid.org/0000-0002-2884-4155, Kerridge, R., Alp, K.M. ORCID: https://orcid.org/0000-0001-9919-9838, Mertins, P. ORCID: https://orcid.org/0000-0002-2245-528X and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular & Cellular Proteomics 23 (10): 100839. October 2024

Natural proteome diversity links aneuploidy tolerance to protein turnover.
Muenzner, J., Trébulle, P., Agostini, F., Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Messner, C.B., Steger, M., Kilian, C., Lau, K., Barthel, N., Lehmann, A., Textoris-Taube, K., Caudal, E., Egger, A.S., Amari, F., De Chiara, M., Demichev, V., Gossmann, T.I., Mülleder, M., Liti, G., Schacherer, J., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Berman, J. and Ralser, M.
Nature 630 (8015): 149-157. 6 June 2024

Pathogenic mutations of human phosphorylation sites affect protein–protein interactions.
Rrustemi, T. ORCID: https://orcid.org/0000-0002-9075-103X, Meyer, K. ORCID: https://orcid.org/0000-0002-8244-6887, Roske, Y. ORCID: https://orcid.org/0000-0001-6237-388X, Uyar, B. ORCID: https://orcid.org/0000-0002-3170-4890, Akalin, A. ORCID: https://orcid.org/0000-0002-0468-0117, Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Ishihama, Y., Daumke, O. ORCID: https://orcid.org/0000-0002-6190-1414 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Nature Communications 15 (1): 3146. 11 April 2024

ADAM19 cleaves the PTH receptor and associates with brachydactyly type E.
Aydin, A. ORCID: https://orcid.org/0000-0002-2890-0225, Klenk, C. ORCID: https://orcid.org/0000-0001-5199-7144, Nemec, K. ORCID: https://orcid.org/0000-0002-3555-5853, Işbilir, Ali ORCID: https://orcid.org/0000-0002-9629-1150, Martin, L.M. ORCID: https://orcid.org/0009-0006-7241-9435, Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Rrustemi, T. ORCID: https://orcid.org/0000-0002-9075-103X, Toka, H.R. ORCID: https://orcid.org/0000-0002-9973-4404, Schuster, H., Gong, M. ORCID: https://orcid.org/0000-0001-7384-3429, Stricker, S. ORCID: https://orcid.org/0000-0002-7174-5363, Bock, A. ORCID: https://orcid.org/0000-0002-6344-6494, Bähring, S. ORCID: https://orcid.org/0000-0001-8734-9755, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Lohse, M.J. ORCID: https://orcid.org/0000-0002-0599-3510 and Luft, F.C. ORCID: https://orcid.org/0000-0002-8635-1199
Life Science Alliance 7 (4): e202302400. April 2024

Targeted perturb-seq reveals EGR1 and FOS as key regulators of the transcriptional RAF-MAPK response.
El Kassem, G., Sieber, A., Klinger, B. ORCID: https://orcid.org/0000-0003-0242-1506, Uhlitz, F., Steinbrecht, D., van Bentum, M., Hillmer, J., von Schlichting, J., Schäfer, R., Blüthgen, N. ORCID: https://orcid.org/0000-0002-0171-7447 and Boettcher, M.
bioRxiv : 2024.01.13.575500. 15 January 2024

2023

HMGXB4 targets Sleeping Beauty transposition to germinal stem cells.
Devaraj, A. ORCID: https://orcid.org/0000-0002-8685-6728, Singh, M. ORCID: https://orcid.org/0000-0002-8626-5418, Narayanavari, S.A. ORCID: https://orcid.org/0000-0002-6997-4829, Yong, G. ORCID: https://orcid.org/0009-0003-3975-0474, Chen, J. ORCID: https://orcid.org/0000-0002-3671-553X, Wang, J. ORCID: https://orcid.org/0000-0002-7027-0298, Becker, M., Walisko, O., Schorn, A., Cseresznyés, Z. ORCID: https://orcid.org/0000-0002-6574-2588, Raskó, T., Radscheit, K., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Ivics, Z. ORCID: https://orcid.org/0000-0002-7803-6658 and Izsvak, Z. ORCID: https://orcid.org/0000-0002-2053-2384
International Journal of Molecular Sciences 24 (8): 7283. 14 April 2023

Cryo-EM captures early ribosome assembly in action.
Qin, B. ORCID: https://orcid.org/0000-0002-2503-7913, Lauer, S.M. ORCID: https://orcid.org/0000-0003-3518-5116, Balke, A. ORCID: https://orcid.org/0000-0001-8469-6911, Vieira-Vieira, C.H. ORCID: https://orcid.org/0000-0001-5443-4507, Bürger, J. ORCID: https://orcid.org/0000-0002-4326-5047, Mielke, T. ORCID: https://orcid.org/0000-0001-9275-3146, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Scheerer, P. ORCID: https://orcid.org/0000-0001-5028-2075, Spahn, C.M.T. ORCID: https://orcid.org/0000-0002-2939-9487 and Nikolay, R. ORCID: https://orcid.org/0000-0003-4713-2548
Nature Communications 14 (1): 898. 17 February 2023

Monitoring mitochondrial translation by pulse SILAC.
Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Ishihama, Y. ORCID: https://orcid.org/0000-0001-7714-203X
Journal of Biological Chemistry 299 (2): 102865. February 2023

Combining metabolic pulse labeling and quantitative proteomics to monitor protein synthesis upon viral infection.
Bogdanow, B. ORCID: https://orcid.org/0000-0002-9634-7353, Katsimani, N., Liu, F. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Methods in Molecular Biology 2610 : 149-165. 2023

2022

Mutant phosphodiesterase 3A protects from hypertension-induced cardiac damage.
Ercu, M., Mücke, M.B. ORCID: https://orcid.org/0000-0002-4957-3307, Pallien, T., Markó, L. ORCID: https://orcid.org/0000-0003-1888-5575, Sholokh, A. ORCID: https://orcid.org/0000-0002-1263-2078, Schächterle, C., Aydin, A. ORCID: https://orcid.org/0000-0002-2890-0225, Kidd, A., Walter, S. ORCID: https://orcid.org/0000-0002-2041-2921, Esmati, Y. ORCID: https://orcid.org/0000-0001-9010-8119, McMurray, B.J. ORCID: https://orcid.org/0000-0003-3394-0667, Lato, D.F. ORCID: https://orcid.org/0000-0002-9263-8532, Sunaga-Franze, D.Y. ORCID: https://orcid.org/0000-0002-6851-9162, Dierks, P.H. ORCID: https://orcid.org/0000-0001-5903-8343, Flores, B.I.M., Walker-Gray, R., Gong, M. ORCID: https://orcid.org/0000-0001-7384-3429, Merticariu, C., Zühlke, K., Russwurm, M., Liu, T., Batolomaeus, T.U.P. ORCID: https://orcid.org/0000-0002-5156-7184, Pautz, S., Schelenz, S., Taube, M., Napieczynska, H. ORCID: https://orcid.org/0000-0001-5091-1185, Heuser, A. ORCID: https://orcid.org/0000-0002-3334-960X, Eichhorst, J., Lehmann, M., Miller, D.C. ORCID: https://orcid.org/0000-0001-9852-677X, Diecke, S. ORCID: https://orcid.org/0000-0002-5219-5992, Qadri, F. ORCID: https://orcid.org/0000-0002-8500-489X, Popova, E. ORCID: https://orcid.org/0000-0002-3043-9650, Langanki, R., Movsesian, M.A., Herberg, F.W. ORCID: https://orcid.org/0000-0001-7117-7653, Forslund, S.K. ORCID: https://orcid.org/0000-0003-4285-6993, Müller, D.N. ORCID: https://orcid.org/0000-0003-3650-5644, Borodina, T. ORCID: https://orcid.org/0000-0002-6978-016X, Maass, P.G. ORCID: https://orcid.org/0000-0002-2742-8301, Bähring, S. ORCID: https://orcid.org/0000-0001-8734-9755, Hübner, N. ORCID: https://orcid.org/0000-0002-1218-6223, Bader, M. ORCID: https://orcid.org/0000-0003-4780-4164 and Klussmann, E. ORCID: https://orcid.org/0000-0003-4004-5003
Circulation 146 (23): 1758-1778. 6 December 2022

A critical period of translational control during brain development at codon resolution.
Harnett, D. ORCID: https://orcid.org/0000-0002-9190-128X, Ambrozkiewicz, M.C. ORCID: https://orcid.org/0000-0001-5225-5230, Zinnall, U. ORCID: https://orcid.org/0000-0002-0782-7751, Rusanova, A., Borisova, E., Drescher, A.N., Couce-Iglesias, M., Villamil, G. ORCID: https://orcid.org/0000-0001-6701-9505, Dannenberg, R., Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Münster-Wandowski, A., Fauler, B., Mielke, T., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734, Spahn, C.M.T., Tarabykin, V., Ohler, U. ORCID: https://orcid.org/0000-0002-0881-3116 and Kraushar, M.L.
Nature Structural & Molecular Biology 29 (12): 1277-1290. December 2022

Compound interaction screen on a photoactivatable cellulose membrane (CISCM) identifies drug targets.
Melder, F.T. ORCID: https://orcid.org/0000-0002-7181-9369, Lindemann, P. ORCID: https://orcid.org/0000-0002-8224-3764, Welle, A., Trouillet, V., Heißler, S., Nazaré, M. ORCID: https://orcid.org/0000-0002-1602-2330 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
ChemMedChem 17 (19): e202200346. 6 October 2022

A novel gene controls a new structure: piggyBac transposable element-derived 1, unique to mammals, controls mammal-specific neuronal paraspeckles.
Raskó, T., Pande, A. ORCID: https://orcid.org/0009-0008-0826-973X, Radscheit, K., Zink, A. ORCID: https://orcid.org/0000-0002-8489-6339, Singh, M. ORCID: https://orcid.org/0000-0002-8626-5418, Sommer, C., Wachtl, G., Kolacsek, O., Inak, G., Szvetnik, A., Petrakis, S., Bunse, M. ORCID: https://orcid.org/0000-0002-7554-2520, Bansal, V. ORCID: https://orcid.org/0000-0002-0944-7226, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Orbán, T.I., Prigione, A. ORCID: https://orcid.org/0000-0001-9457-1952, Hurst, L.D. ORCID: https://orcid.org/0000-0002-1002-1054 and Izsvák, Z. ORCID: https://orcid.org/0000-0002-2053-2384
Molecular Biology and Evolution 39 (10): msac175. October 2022

Physiological functions of intracellular protein degradation.
McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Annual Review of Cell and Developmental Biology 38 : 241-262. October 2022

Therapeutic targeting of ATR in alveolar rhabdomyosarcoma.
Dorado Garcia, H. ORCID: https://orcid.org/0000-0002-2578-3350, Pusch, F. ORCID: https://orcid.org/0000-0002-7152-080X, Bei, Y. ORCID: https://orcid.org/0000-0002-2104-8025, von Stebut, J. ORCID: https://orcid.org/0000-0001-9811-445X, Ibáñez, G., Guillan, K., Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Gürgen, D. ORCID: https://orcid.org/0000-0001-9241-6537, Rolff, J., Helmsauer, K. ORCID: https://orcid.org/0000-0003-0773-4114, Meyer-Liesener, S., Timme, N., Bardinet, V. ORCID: https://orcid.org/0000-0002-9583-7043, Chamorro González, R. ORCID: https://orcid.org/0000-0002-5653-7259, MacArthur, I.C. ORCID: https://orcid.org/0000-0003-1718-1349, Chen, C.Y. ORCID: https://orcid.org/0000-0002-1579-024X, Schulz, J., Wengner, A.M. ORCID: https://orcid.org/0009-0009-5772-1945, Furth, C., Lala, B., Eggert, A. ORCID: https://orcid.org/0000-0003-3476-8184, Seifert, G., Hundsoerfer, P., Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X, Mertins, P. ORCID: https://orcid.org/0000-0002-2245-528X, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Lissat, A., Dubois, F. ORCID: https://orcid.org/0000-0002-7654-6208, Horst, D., Schulte, J.H. ORCID: https://orcid.org/0000-0003-0671-1201, Spuler, S. ORCID: https://orcid.org/0000-0002-0155-1117, You, D., Dela Cruz, F., Kung, A.L. ORCID: https://orcid.org/0000-0002-9091-488X, Haase, K. ORCID: https://orcid.org/0000-0002-0944-5618, Di Virgilio, M. ORCID: https://orcid.org/0000-0001-5189-0793, Scheer, M., Ortiz, M.V. and Henssen, A.G. ORCID: https://orcid.org/0000-0003-1534-778X
Nature Communications 13 (1): 4297. 25 July 2022

GIMAP6 regulates autophagy, immune competence, and inflammation in mice and humans.
Yao, Y. ORCID: https://orcid.org/0000-0002-8890-2409, Du Jiang, P. ORCID: https://orcid.org/0000-0002-9900-8277, Chao, B.N. ORCID: https://orcid.org/0000-0002-0355-2332, Cagdas, D. ORCID: https://orcid.org/0000-0003-2213-4627, Kubo, S. ORCID: https://orcid.org/0000-0001-9693-9263, Balasubramaniyam, A. ORCID: https://orcid.org/0000-0003-4168-8617, Zhang, Y. ORCID: https://orcid.org/0000-0002-6904-0372, Shadur, B. ORCID: https://orcid.org/0000-0003-0245-894X, NaserEddin, A. ORCID: https://orcid.org/0000-0001-6995-3262, Folio, L.R., Schwarz, B. ORCID: https://orcid.org/0000-0002-5894-953X, Bohrnsen, E. ORCID: https://orcid.org/0000-0003-4327-5242, Zheng, L. ORCID: https://orcid.org/0000-0002-8838-8665, Lynberg, M. ORCID: https://orcid.org/0000-0003-1371-3002, Gottlieb, S. ORCID: https://orcid.org/0000-0003-0550-4761, Leney-Greene, M.A. ORCID: https://orcid.org/0000-0002-3259-1728, Park, A.Y. ORCID: https://orcid.org/0000-0002-0130-1521, Tezcan, I. ORCID: https://orcid.org/0000-0001-7257-4554, Akdogan, A., Gocmen, R. ORCID: https://orcid.org/0000-0002-0223-9336, Onder, S. ORCID: https://orcid.org/0000-0002-5523-0669, Rosenberg, A., Soilleux, E.J. ORCID: https://orcid.org/0000-0002-4032-7249, Johnson, E. ORCID: https://orcid.org/0000-0001-8435-9472, Jackson, P.K. ORCID: https://orcid.org/0000-0002-1742-2539, Demeter, J., Chauvin, S.D. ORCID: https://orcid.org/0000-0003-0232-751X, Paul, F. ORCID: https://orcid.org/0000-0001-5181-3122, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Bulut, H. ORCID: https://orcid.org/0000-0003-0262-6296, Clatworthy, M.R. ORCID: https://orcid.org/0000-0002-3340-9828, Tuong, Z.K. ORCID: https://orcid.org/0000-0002-6735-6808, Zhang, H., Stewart, B.J. ORCID: https://orcid.org/0000-0003-4522-0085, Bosio, C.M. ORCID: https://orcid.org/0000-0002-7332-9611, Stepensky, P. ORCID: https://orcid.org/0000-0002-4923-3660, Clare, S. ORCID: https://orcid.org/0000-0001-9368-6037, Ganesan, S. ORCID: https://orcid.org/0000-0003-1132-2016, Pascall, J.C. ORCID: https://orcid.org/0000-0002-9506-1441, Daumke, O. ORCID: https://orcid.org/0000-0002-6190-1414, Butcher, G.W. ORCID: https://orcid.org/0000-0002-3423-7124, McMichael, A.J. ORCID: https://orcid.org/0000-0002-9101-7478, Simon, A.K. ORCID: https://orcid.org/0000-0002-4077-7995 and Lenardo, M.J. ORCID: https://orcid.org/0000-0003-1584-468X
Journal of Experimental Medicine 219 (6): e20201405. 6 June 2022

In vitro Kinase-to-Phosphosite database (iKiP-DB) predicts kinase activity in phosphoproteomic datasets.
Mari, T. ORCID: https://orcid.org/0000-0001-6011-9386, Mösbauer, K., Wyler, E. ORCID: https://orcid.org/0000-0002-9884-1806, Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734, Drosten, C. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Journal of Proteome Research 21 (6): 1575-1587. 3 June 2022

Proteome-wide quantitative RNA-interactome capture identifies phosphorylation sites with regulatory potential in RBM20.
Vieira e Vieira, C.H. ORCID: https://orcid.org/0000-0001-5443-4507, Dauksaite, V. ORCID: https://orcid.org/0000-0002-9399-4731, Sporbert, A. ORCID: https://orcid.org/0000-0002-3738-1295, Gotthardt, M. ORCID: https://orcid.org/0000-0003-1788-3172 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular Cell 82 (11): 2069-2083. 2 June 2022

HDLBP binds ER-targeted mRNAs by multivalent interactions to promote protein synthesis of transmembrane and secreted proteins.
Zinnall, U. ORCID: https://orcid.org/0000-0002-0782-7751, Milek, M. ORCID: https://orcid.org/0000-0002-0803-8439, Minia, I. ORCID: https://orcid.org/0000-0003-1012-3373, Vieira-Vieira, C.H. ORCID: https://orcid.org/0000-0001-5443-4507, Müller, S., Mastrobuoni, G. ORCID: https://orcid.org/0000-0003-4509-1295, Hazapis, O.G., Del Giudice, S. ORCID: https://orcid.org/0000-0003-0194-3767, Schwefel, D. ORCID: https://orcid.org/0000-0002-2945-0908, Bley, N., Voigt, F., Chao, J.A. ORCID: https://orcid.org/0000-0002-5895-9156, Kempa, S. ORCID: https://orcid.org/0000-0002-0696-9299, Hüttelmaier, S. ORCID: https://orcid.org/0000-0001-9335-4227, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734
Nature Communications 13 (1): 2727. 18 May 2022

MYCN mediates cysteine addiction and sensitizes neuroblastoma to ferroptosis.
Alborzinia, H. ORCID: https://orcid.org/0000-0001-6903-3001, Flórez, A.F. ORCID: https://orcid.org/0000-0002-3063-0578, Kreth, S., Brückner, L.M., Yildiz, U. ORCID: https://orcid.org/0000-0002-7175-362X, Gartlgruber, M., Odoni, D.I., Poschet, G. ORCID: https://orcid.org/0000-0002-5344-0865, Garbowicz, K., Shao, C., Klein, C., Meier, J., Zeisberger, P., Nadler-Holly, M., Ziehm, M. ORCID: https://orcid.org/0000-0001-7074-4054, Paul, F., Burhenne, J., Bell, E., Shaikhkarami, M., Würth, R. ORCID: https://orcid.org/0000-0002-8156-6756, Stainczyk, S.A. ORCID: https://orcid.org/0000-0003-3746-7010, Wecht, E.M., Kreth, J., Büttner, M., Ishaque, N. ORCID: https://orcid.org/0000-0002-8426-901X, Schlesner, M., Nicke, B., Stresemann, C., Llamazares-Prada, M., Reiling, J.H., Fischer, M. ORCID: https://orcid.org/0000-0003-1363-1242, Amit, I. ORCID: https://orcid.org/0000-0003-2968-877X, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Herrmann, C. ORCID: https://orcid.org/0000-0003-4989-4722, Wölfl, S., Henrich, K.O., Höfer, T. ORCID: https://orcid.org/0000-0003-3560-8780, Trumpp, A. ORCID: https://orcid.org/0000-0003-1584-3636 and Westermann, F.
Nature Cancer 3 (4): 471-485. 28 April 2022

2021

SARS-CoV-2 infection triggers profibrotic macrophage responses and lung fibrosis.
Wendisch, D., Dietrich, O., Mari, T. ORCID: https://orcid.org/0000-0001-6011-9386, von Stillfried, S., Ibarra, I.L., Mittermaier, M., Mache, C., Chua, R.L., Knoll, R., Timm, S., Brumhard, S., Krammer, T., Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Hiller, A.L., Pascual-Reguant, A., Mothes, R., Bülow, R.D., Schulze, J., Leipold, A.M., Djudjaj, S., Erhard, F., Geffers, R., Pott, F., Kazmierski, J., Radke, J., Pergantis, P., Baßler, K., Conrad, C., Aschenbrenner, A.C., Sawitzki, B., Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734, Wyler, E. ORCID: https://orcid.org/0000-0002-9884-1806, Horst, D., Hippenstiel, S., Hocke, A., Heppner, F.L., Uhrig, A., Garcia, C., Machleidt, F., Herold, S., Elezkurtaj, S., Thibeault, C., Witzenrath, M., Cochain, C., Suttorp, N., Drosten, C., Goffinet, C., Kurth, F., Schultze, J.L., Radbruch, H., Ochs, M., Eils, R., Müller-Redetzky, H., Hauser, A.E., Luecken, M.D., Theis, F.J., Conrad, C., Wolff, T., Boor, P., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Saliba, A.E. and Sander, L.E.
Cell 184 (26): 6243-6261. 22 December 2021

Expanding the phenotype of NUP85 mutations beyond nephrotic syndrome to primary autosomal recessive microcephaly and Seckel syndrome spectrum disorders.
Ravindran, E. ORCID: https://orcid.org/0000-0002-0095-116X, Jühlen, R., Vieira-Vieira, C.H. ORCID: https://orcid.org/0000-0001-5443-4507, Ha, T., Salzberg, Y., Fichtman, B., Luise-Becker, L., Martins, N., Picker-Minh, S., Bessa, P., Arts, P., Jackson, M.R., Taranath, A., Kamien, B., Barnett, C., Li, N., Tarabykin, V., Stoltenburg-Didinger, G., Harel, A., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Dickmanns, A., Fahrenkrog, B., Hu, H., Scott, H. and Kaindl, A.M.
Human Molecular Genetics 30 (22): 2068-2081. 15 November 2021

Neuroblastoma signalling models unveil combination therapies targeting feedback-mediated resistance.
Dorel, M. ORCID: https://orcid.org/0000-0002-1663-2075, Klinger, B. ORCID: https://orcid.org/0000-0003-0242-1506, Mari, T. ORCID: https://orcid.org/0000-0001-6011-9386, Toedling, J. ORCID: https://orcid.org/0000-0003-1471-1295, Blanc, E. ORCID: https://orcid.org/0000-0002-4369-0254, Messerschmidt, C. ORCID: https://orcid.org/0000-0001-8632-656X, Nadler-Holly, M., Ziehm, M. ORCID: https://orcid.org/0000-0001-7074-4054, Sieber, A. ORCID: https://orcid.org/0000-0001-6588-8547, Hertwig, F. ORCID: https://orcid.org/0000-0003-4784-6516, Beule, D. ORCID: https://orcid.org/0000-0002-3284-0632, Eggert, A., Schulte, J.H. ORCID: https://orcid.org/0000-0003-0671-1201, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Blüthgen, N. ORCID: https://orcid.org/0000-0002-0171-7447
PLoS Computational Biology 17 (11): e1009515. 4 November 2021

An introduction to advanced targeted acquisition methods.
van Bentum, M. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular & Cellular Proteomics 20 : 100165. 18 October 2021

Cargo-specific recruitment in clathrin- and dynamin-independent endocytosis.
Moreno-Layseca, P. ORCID: https://orcid.org/0000-0002-9456-4178, Jäntti, N.Z. ORCID: https://orcid.org/0000-0003-1547-0390, Godbole, R., Sommer, C., Jacquemet, G. ORCID: https://orcid.org/0000-0002-9286-920X, Al-Akhrass, H. ORCID: https://orcid.org/0000-0002-9630-3000, Conway, J.R.W. ORCID: https://orcid.org/0000-0003-3787-277X, Kronqvist, P., Kallionpää, R.E. ORCID: https://orcid.org/0000-0003-0146-0060, Oliveira-Ferrer, L., Cervero, P. ORCID: https://orcid.org/0000-0002-9417-7733, Linder, S. ORCID: https://orcid.org/0000-0001-8226-2802, Aepfelbacher, M., Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Rae, J., Parton, R.G. ORCID: https://orcid.org/0000-0002-7494-5248, Disanza, A. ORCID: https://orcid.org/0000-0001-5101-2907, Scita, G. ORCID: https://orcid.org/0000-0001-7984-1889, Mayor, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Veltel, S. ORCID: https://orcid.org/0000-0002-4925-3776 and Ivaska, J. ORCID: https://orcid.org/0000-0002-6295-6556
Nature Cell Biology 23 (10): 1073-1084. October 2021

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules.
Cipriani, P.G. ORCID: https://orcid.org/0000-0001-9772-1012, Bay, O., Zinno, J., Gutwein, M., Gan, H.H., Mayya, V.K., Chung, G., Chen, J.X. ORCID: https://orcid.org/0000-0002-3671-553X, Fahs, H., Guan, Y., Duchaine, T.F., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Piano, F. and Gunsalus, K.C. ORCID: https://orcid.org/0000-0001-9769-4624
eLife 10 : e60833. 3 August 2021

Insulin mRNA is stored in RNA granules in resting beta cells.
Vasiljević, J. ORCID: https://orcid.org/0000-0001-5950-2011, Vasiljević, D., Ganß, K., Sönmez, A., Wegbrod, C., Quezada, E., Münster, C., Schöniger, E., Friedland, D., Kipke, N., Distler, M., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Solimena, M. ORCID: https://orcid.org/0000-0002-3653-8107
bioRxiv : 2021.05.07.443159v2. 29 June 2021

Opportunities and challenges in global quantification of RNA-protein interaction via UV cross-linking.
Vieira-Vieira, C.H. ORCID: https://orcid.org/0000-0001-5443-4507 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Frontiers in Molecular Biosciences 8 : 669939. 13 May 2021

MACC1 regulates clathrin-mediated endocytosis and receptor recycling of transferrin receptor and EGFR in colorectal cancer.
Imbastari, F. ORCID: https://orcid.org/0000-0001-8440-9847, Dahlmann, M. ORCID: https://orcid.org/0000-0002-0036-5283, Sporbert, A. ORCID: https://orcid.org/0000-0002-3738-1295, Ciolli Mattioli, C. ORCID: https://orcid.org/0000-0002-8499-1387, Mari, T. ORCID: https://orcid.org/0000-0001-6011-9386, Scholz, F. ORCID: https://orcid.org/0000-0002-0253-081X, Timm, L., Twamley, S., Migotti, R. ORCID: https://orcid.org/0000-0001-7183-1424, Walther, W. ORCID: https://orcid.org/0000-0003-2884-0231, Dittmar, G. ORCID: https://orcid.org/0000-0003-3647-8623, Rehm, A. ORCID: https://orcid.org/0000-0001-7490-1950 and Stein, U. ORCID: https://orcid.org/0000-0001-7006-282X
Cellular and Molecular Life Sciences 78 (7): 3525-3542. April 2021

Transcriptomic profiling of SARS-CoV-2 infected human cell lines identifies HSP90 as target for COVID-19 therapy.
Wyler, E. ORCID: https://orcid.org/0000-0002-9884-1806, Mösbauer, K., Franke, V. ORCID: https://orcid.org/0000-0003-3606-6792, Diag, A., Gottula, L.T., Arsiè, R. ORCID: https://orcid.org/0000-0002-7869-7624, Klironomos, F., Koppstein, D. ORCID: https://orcid.org/0000-0002-8618-7237, Hönzke, K., Ayoub, S. ORCID: https://orcid.org/0000-0001-5043-8922, Buccitelli, C. ORCID: https://orcid.org/0000-0002-2637-2131, Hoffmann, K., Richter, A., Legnini, I. ORCID: https://orcid.org/0000-0002-8984-5215, Ivanov, A. ORCID: https://orcid.org/0000-0002-4824-1925, Mari, T. ORCID: https://orcid.org/0000-0001-6011-9386, Del Giudice, S. ORCID: https://orcid.org/0000-0003-0194-3767, Papies, J., Praktiknjo, S. ORCID: https://orcid.org/0000-0002-0186-5271, Meyer, T.F., Müller, M.A., Niemeyer, D. ORCID: https://orcid.org/0000-0002-1897-6365, Hocke, A., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Akalin, A. ORCID: https://orcid.org/0000-0002-0468-0117, Rajewsky, N. ORCID: https://orcid.org/0000-0002-4785-4332, Drosten, C. and Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734
iScience 24 (3): 102151. 19 March 2021

Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization.
Nikolay, R., Hilal, T., Schmidt, S., Qin, B., Schwefel, D. ORCID: https://orcid.org/0000-0002-2945-0908, Vieira-Vieira, C.H. ORCID: https://orcid.org/0000-0001-5443-4507, Mielke, T., Bürger, J., Loerke, J. ORCID: https://orcid.org/0000-0002-3424-8536, Amikura, K., Flügel, T., Ueda, T., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Deuerling, E. and Spahn, C.M.T.
Molecular Cell 81 (6): 1200-1215. 18 March 2021

The UBA domain of conjugating enzyme Ubc1/Ube2K facilitates assembly of K48/K63‐branched ubiquitin chains.
Pluska, L. ORCID: https://orcid.org/0000-0002-8669-6533, Jarosch, E. ORCID: https://orcid.org/0000-0002-5897-3492, Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Kniss, A., Waltho, A. ORCID: https://orcid.org/0009-0000-0059-9357, Bagola, K. ORCID: https://orcid.org/0000-0003-0269-6454, von Delbrück, M., Löhr, F., Schulman, B.A. ORCID: https://orcid.org/0000-0002-3083-1126, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Dötsch, V. and Sommer, T. ORCID: https://orcid.org/0000-0001-9990-5202
EMBO Journal 40 (6): e106094. 15 March 2021

Alternative lengthening of telomeres in childhood neuroblastoma from genome to proteome.
Hartlieb, S.A. ORCID: https://orcid.org/0000-0003-3746-7010, Sieverling, L. ORCID: https://orcid.org/0000-0002-0595-4976, Nadler-Holly, M., Ziehm, M. ORCID: https://orcid.org/0000-0001-7074-4054, Toprak, U.H., Herrmann, C. ORCID: https://orcid.org/0000-0003-4989-4722, Ishaque, N. ORCID: https://orcid.org/0000-0002-8426-901X, Okonechnikov, K., Gartlgruber, M., Park, Y.G., Wecht, E.M., Savelyeva, L., Henrich, K.O., Rosswog, C., Fischer, M. ORCID: https://orcid.org/0000-0003-1363-1242, Hero, B., Jones, D.T.W., Pfaff, E., Witt, O., Pfister, S.M., Volckmann, Ri., Koster, J. ORCID: https://orcid.org/0000-0002-0890-7585, Kiesel, K., Rippe, K. ORCID: https://orcid.org/0000-0001-9951-9395, Taschner-Mandl, S. ORCID: https://orcid.org/0000-0002-1439-5301, Ambros, P., Brors, B. ORCID: https://orcid.org/0000-0001-5940-3101, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Feuerbach, L. ORCID: https://orcid.org/0000-0003-1503-437X and Westermann, F.
Nature Communications 12 (1): 1269. 24 February 2021

Protein synthesis in the developing neocortex at near-atomic resolution reveals Ebp1-mediated neuronal proteostasis at the 60S tunnel exit.
Kraushar, M.L. ORCID: https://orcid.org/0000-0002-7359-0318, Krupp, F. ORCID: https://orcid.org/0000-0002-0402-8647, Harnett, D. ORCID: https://orcid.org/0000-0002-9190-128X, Turko, P., Ambrozkiewicz, M.C. ORCID: https://orcid.org/0000-0001-5225-5230, Sprink, T. ORCID: https://orcid.org/0000-0002-0760-6828, Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Günnigmann, M., Zinnall, U. ORCID: https://orcid.org/0000-0002-0782-7751, Vieira-Vieira, C.H. ORCID: https://orcid.org/0000-0001-5443-4507, Schaub, T. ORCID: https://orcid.org/0000-0003-0790-5040, Münster-Wandowski, A., Bürger, J., Borisova, E., Yamamoto, H., Rasin, M.R., Ohler, U. ORCID: https://orcid.org/0000-0002-0881-3116, Beule, D. ORCID: https://orcid.org/0000-0002-3284-0632, Mielke, T., Tarabykin, V., Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734, Kramer, G., Vida, I., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Spahn, C.M.T.
Molecular Cell 81 (2): 304-322. 21 January 2021

2020

Murine cytomegalovirus M25 proteins sequester the tumor suppressor protein p53 in nuclear accumulations.
Kutle, I., Szymańska-de Wijs, K.M., Bogdanow, B. ORCID: https://orcid.org/0000-0002-9634-7353, Cuvalo, B., Steinbrück, L., Jonjić, S., Wagner, K., Niedenthal, R., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Wiebusch, L., Dezeljin, M. and Messerle, M.
Journal of Virology 94 (20): e00574-20. October 2020

mRNAs, proteins and the emerging principles of gene expression control.
Buccitelli, C. ORCID: https://orcid.org/0000-0002-2637-2131 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Nature Reviews Genetics 21 (10): 630-644. October 2020

Cross-regulation of viral kinases with cyclin A secures shutoff of host DNA synthesis.
Bogdanow, B. ORCID: https://orcid.org/0000-0002-9634-7353, Schmidt, M., Weisbach, H., Gruska, I. ORCID: https://orcid.org/0000-0002-9539-609X, Vetter, B., Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Ostermann, E. ORCID: https://orcid.org/0000-0002-7539-2155, Brune, W. ORCID: https://orcid.org/0000-0002-6078-5255, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Hagemeier, C. and Wiebusch, L. ORCID: https://orcid.org/0000-0002-7210-6731
Nature Communications 11 (1): 4845. 24 September 2020

Peptide-based interaction proteomics.
Meyer, K. ORCID: https://orcid.org/0000-0002-8244-6887 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular & Cellular Proteomics 19 (7): 1070-1075. July 2020

Phosphosite analysis of the cytomegaloviral mRNA export factor pUL69 reveals serines with critical importance for recruitment of cellular proteins Pin1 and UAP56/URH49.
Thomas, M., Müller, R., Horn, G., Bogdanow, B. ORCID: https://orcid.org/0000-0002-9634-7353, Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Milbradt, J., Steingruber, M., Marschall, M., Schilling, E.M., Fossen, T. and Stamminger, T.
Journal of Virology 94 (8): e02151-19. 31 March 2020

The human ZC3H3 and RBM26/27 proteins are critical for PAXT-mediated nuclear RNA decay.
Silla, T., Schmid, M., Dou, Y., Garland, W., Milek, M. ORCID: https://orcid.org/0000-0002-0803-8439, Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Johnsen, D., Polak, P., Andersen, J.S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734 and Jensen, T. ORCID: https://orcid.org/0000-0001-5127-1239
Nucleic Acids Research 48 (5): 2518-2530. 18 March 2020

Keeping the proportions of protein complex components in check.
Taggart, J.C., Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Li, G.W. and McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063
Cell Systems 10 (2): 125-132. 26 February 2020

2019

The dynamic proteome of influenza A virus infection identifies M segment splicing as a host range determinant.
Bogdanow, B. ORCID: https://orcid.org/0000-0002-9634-7353, Wang, X. ORCID: https://orcid.org/0000-0002-7572-6354, Eichelbaum, K., Sadewasser, A. ORCID: https://orcid.org/0000-0002-8491-3952, Husic, I., Paki, K., Budt, M., Hergeselle, M., Vetter, B., Hou, J., Chen, W. ORCID: https://orcid.org/0000-0003-3263-1627, Wiebusch, L. ORCID: https://orcid.org/0000-0002-7210-6731, Meyer, I.M. ORCID: https://orcid.org/0000-0002-4048-3479, Wolff, T. ORCID: https://orcid.org/0000-0001-7688-236X and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Nature Communications 10 (1): 5518. 4 December 2019

Identification of proteins and miRNAs that specifically bind an mRNA in vivo.
Theil, K. ORCID: https://orcid.org/0000-0002-7205-6308, Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982 and Rajewsky, N. ORCID: https://orcid.org/0000-0002-4785-4332
Nature Communications 10 (1): 4205. 16 September 2019

Recruitment of histone methyltransferase Ehmt1 to Foxp3 TSDR counteracts differentiation of induced regulatory T cells.
Karl, M., Sommer, C., Gabriel, C.H., Hecklau, K., Venzke, M., Hennig, A.F., Radbruch, A., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Baumgrass, R.
Journal of Molecular Biology 431 (19): 3606-3625. 6 September 2019

Wnt11/Fzd7 signaling compartmentalizes AKAP2/PKA to regulate L-type Ca(2+) channel.
Csalyi, K.D. ORCID: https://orcid.org/0000-0002-0853-8257, Rharass, T. ORCID: https://orcid.org/0000-0001-9406-1776, Schulz, M., Phan, M.H.Q., Wakula, P., Mhatre, K.N., Plotnick, D., Werdich, A.A., Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Sury, M.D., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Heinzel, F.R., Klussmann, E. ORCID: https://orcid.org/0000-0003-4004-5003 and Panakova, D. ORCID: https://orcid.org/0000-0002-8739-6225
bioRxiv : 741637. 20 August 2019

Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma.
von Hoff, L., Kärgel, E., Franke, V. ORCID: https://orcid.org/0000-0003-3606-6792, McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063, Schulz-Beiss, K.W., Patone, G. ORCID: https://orcid.org/0000-0002-7242-0341, Schleussner, N. ORCID: https://orcid.org/0009-0001-3549-5600, Kolesnichenko, M. ORCID: https://orcid.org/0000-0001-7366-9061, Hübner, N. ORCID: https://orcid.org/0000-0002-1218-6223, Daumke, O. ORCID: https://orcid.org/0000-0002-6190-1414, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Akalin, A. ORCID: https://orcid.org/0000-0002-0468-0117, Mathas, S. ORCID: https://orcid.org/0000-0001-9626-1413 and Scheidereit, C. ORCID: https://orcid.org/0000-0002-0446-6129
Blood 133 (13): 1489-1494. 28 March 2019

Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments.
Ciolli Mattioli, C. ORCID: https://orcid.org/0000-0002-8499-1387, Rom, A., Franke, V. ORCID: https://orcid.org/0000-0003-3606-6792, Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Arrey, G., Terne, M., Woehler, A. ORCID: https://orcid.org/0000-0001-5157-9313, Akalin, A. ORCID: https://orcid.org/0000-0002-0468-0117, Ulitsky, I. ORCID: https://orcid.org/0000-0003-0555-6561 and Chekulaeva, M. ORCID: https://orcid.org/0000-0002-6868-7887
Nucleic Acids Research 47 (5): 2560-2573. 18 March 2019

Purification of cross-linked RNA-protein complexes by phenol-toluol extraction.
Urdaneta, E.C. ORCID: https://orcid.org/0000-0001-7539-8154, Vieira-Vieira, C.H. ORCID: https://orcid.org/0000-0001-5443-4507, Hick, T., Wessels, H.H. ORCID: https://orcid.org/0000-0001-5551-404X, Figini, D., Moschall, R., Medenbach, J., Ohler, U. ORCID: https://orcid.org/0000-0002-0881-3116, Granneman, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Beckmann, B.M. ORCID: https://orcid.org/0000-0001-7566-4408
Nature Communications 10 (1): 990. 1 March 2019

Integrated phosphoproteome and transcriptome analysis reveals Chlamydia-induced epithelial-to-mesenchymal transition in host cells.
Zadora, P.K., Chumduri, C., Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Berger, H., Mi, Y., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Meyer, T.F. and Gurumurthy, R.K.
Cell Reports 26 (5): 1286-1302. 29 January 2019

2018

Phosphorylation of the ribosomal protein RPL12/uL11 affects translation during mitosis.
Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Milek, M. ORCID: https://orcid.org/0000-0002-0803-8439, Bogdanow, B. ORCID: https://orcid.org/0000-0002-9634-7353, Yasuda, T. ORCID: https://orcid.org/0000-0001-9997-6852, Kastelic, N., Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Ishihama, Y., Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular Cell 72 (1): 84-98. 4 October 2018

Mutations in disordered regions can cause disease by creating dileucine motifs.
Meyer, K. ORCID: https://orcid.org/0000-0002-8244-6887, Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X, Uyar, B. ORCID: https://orcid.org/0000-0002-3170-4890, Cheng, J.Y. ORCID: https://orcid.org/0000-0001-8942-0607, Russo, G., Hernandez-Miranda, L.R. ORCID: https://orcid.org/0000-0002-0498-708X, Szymborska, A. ORCID: https://orcid.org/0000-0003-1741-4106, Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Rudolph, I.M. ORCID: https://orcid.org/0000-0002-3903-0755, Willnow, T.E. ORCID: https://orcid.org/0000-0001-9515-7921, Akalin, A. ORCID: https://orcid.org/0000-0002-0468-0117, Haucke, V. ORCID: https://orcid.org/0000-0003-3119-6993, Gerhardt, H. ORCID: https://orcid.org/0000-0002-3030-0384, Birchmeier, C. ORCID: https://orcid.org/0000-0002-2041-8872, Kühn, R. ORCID: https://orcid.org/0000-0003-1694-9803, Krauss, M., Diecke, S. ORCID: https://orcid.org/0000-0002-5219-5992, Pascual, J.M. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Cell 175 (1): 239-253. 20 September 2018

Evolutionary plasticity in the innate immune function of Akirin.
Polanowska, J., Chen, J.X. ORCID: https://orcid.org/0000-0002-3671-553X, Soulé, J., Omi, S., Belougne, J. ORCID: https://orcid.org/0000-0003-1175-8119, Taffoni, C., Pujol, N. ORCID: https://orcid.org/0000-0001-8889-3197, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Zugasti, O. and Ewbank, J.J. ORCID: https://orcid.org/0000-0002-1257-6862
PLoS Genetics 14 (7): e1007494. 23 July 2018

Kinase-controlled phase transition of membraneless organelles in mitosis.
Rai, A.K., Chen, J.X. ORCID: https://orcid.org/0000-0002-3671-553X, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Pelkmans, L.
Nature 559 (7713): 211-216. July 2018

Maf links Neuregulin1 signaling to cholesterol synthesis in myelinating Schwann cells.
Kim, M. ORCID: https://orcid.org/0000-0002-6863-841X, Wende, H. ORCID: https://orcid.org/0000-0002-9168-8095, Walcher, J., Kühnemund, J., Cheret, C. ORCID: https://orcid.org/0000-0001-7382-0403, Kempa, S. ORCID: https://orcid.org/0000-0002-0696-9299, McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Lewin, G.R. ORCID: https://orcid.org/0000-0002-2890-6352 and Birchmeier, C. ORCID: https://orcid.org/0000-0002-2041-8872
Genes & Development 32 (9-10): 645-657. 10 May 2018

Picky: a simple online PRM and SRM method designer for targeted proteomics.
Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Nature Methods 15 (3): 156-157. 28 February 2018

2017

RNA localization is a key determinant of neurite-enriched proteome.
Zappulo, A., van den Bruck, D., Ciolli Mattioli, C. ORCID: https://orcid.org/0000-0002-8499-1387, Franke, V. ORCID: https://orcid.org/0000-0003-3606-6792, Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063, Moreno-Estelles, M., Calviello, L. ORCID: https://orcid.org/0000-0002-5600-0988, Filipchyk, A. ORCID: https://orcid.org/0000-0002-2029-8460, Peguero-Sanchez, E. ORCID: https://orcid.org/0000-0002-8317-5572, Müller, T. ORCID: https://orcid.org/0000-0001-8096-1853, Woehler, A. ORCID: https://orcid.org/0000-0001-5157-9313, Birchmeier, C. ORCID: https://orcid.org/0000-0002-2041-8872, Merino, E., Rajewsky, N. ORCID: https://orcid.org/0000-0002-4785-4332, Ohler, U. ORCID: https://orcid.org/0000-0002-0881-3116, Mazzoni, E.O., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Akalin, A. ORCID: https://orcid.org/0000-0002-0468-0117 and Chekulaeva, M. ORCID: https://orcid.org/0000-0002-6868-7887
Nature Communications 8 (1): 583. 19 September 2017

DDX54 regulates transcriptome dynamics during DNA damage response.
Milek, M. ORCID: https://orcid.org/0000-0002-0803-8439, Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Mukherjee, N. ORCID: https://orcid.org/0000-0003-0017-1400, De Bortoli, F., Zinnall, U. ORCID: https://orcid.org/0000-0002-0782-7751, Hazapis, O., Trahan, C., Oeffinger, M. ORCID: https://orcid.org/0000-0001-6427-1393, Heyd, F., Ohler, U. ORCID: https://orcid.org/0000-0002-0881-3116, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734
Genome Research 27 (8): 1344-1359. August 2017

Regulation of body weight and energy homeostasis by neuronal cell adhesion molecule 1.
Rathjen, T., Yan, X. ORCID: https://orcid.org/0000-0002-9135-7915, Kononenko, N.L., Ku, M.C. ORCID: https://orcid.org/0000-0003-0963-2461, Song, K. ORCID: https://orcid.org/0000-0001-6216-8157, Ferrarese, L. ORCID: https://orcid.org/0000-0001-9098-5357, Tarallo, V., Puchkov, D., Kochlamazashvili, G., Brachs, S., Varela, L., Szigeti-Buck, K., Yi, C.X., Schriever, S.C. ORCID: https://orcid.org/0000-0001-5461-3214, Tattikota, S.G. ORCID: https://orcid.org/0000-0003-0318-5533, Carlo, A.S., Moroni, M. ORCID: https://orcid.org/0000-0002-2389-3468, Siemens, J., Heuser, A. ORCID: https://orcid.org/0000-0002-3334-960X, van der Weyden, L., Birkenfeld, A.L. ORCID: https://orcid.org/0000-0003-1407-9023, Niendorf, T. ORCID: https://orcid.org/0000-0001-7584-6527, Poulet, J.F.A. ORCID: https://orcid.org/0000-0003-0296-5415, Horvath, T.L., Tschöp, M.H., Heinig, M. ORCID: https://orcid.org/0000-0002-5612-1720, Trajkovski, M., Haucke, V. ORCID: https://orcid.org/0000-0003-3119-6993 and Poy, M.N. ORCID: https://orcid.org/0000-0002-4904-2426
Nature Neuroscience 20 (8): 1096-1103. August 2017

Quantitative proteomic approach identifies Vpr binding protein as novel host factor supporting influenza A virus infections in human cells.
Sadewasser, A., Paki, K. ORCID: https://orcid.org/0000-0002-2402-6323, Eichelbaum, K., Bogdanow, B. ORCID: https://orcid.org/0000-0002-9634-7353, Saenger, S., Budt, M., Lesch, M., Hinz, K.P., Herrmann, A., Meyer, T.F., Karlas, A., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Wolff, T. ORCID: https://orcid.org/0000-0001-7688-236X
Molecular & Cellular Proteomics 16 (5): 728-742. 1 May 2017

Fructose-driven glycolysis supports anoxia resistance in the naked mole-rat.
Park, T.J., Reznick, J. ORCID: https://orcid.org/0000-0001-7921-5466, Peterson, B.L., Blass, G., Omerbašić, D. ORCID: https://orcid.org/0000-0003-1839-4856, Bennett, N.C., Kuich, P.H.J.L., Zasada, C. ORCID: https://orcid.org/0000-0003-1547-8317, Browe, B.M., Hamann, W., Applegate, D.T., Radke, M.H. ORCID: https://orcid.org/0000-0003-0112-9917, Kosten, T., Lutermann, H., Gavaghan, V., Eigenbrod, O. ORCID: https://orcid.org/0000-0003-0967-5664, Bégay, V. ORCID: https://orcid.org/0000-0002-9002-4211, Amoroso, V. G., Govind, V., Minshall, R.D., Smith, E.S.J. ORCID: https://orcid.org/0000-0002-2699-1979, Larson, J., Gotthardt, M. ORCID: https://orcid.org/0000-0003-1788-3172, Kempa, S. ORCID: https://orcid.org/0000-0002-0696-9299 and Lewin, G.R. ORCID: https://orcid.org/0000-0002-2890-6352
Science 356 (6335): 307-311. 21 April 2017

Deciphering the ubiquitin code.
Dittmar, G. ORCID: https://orcid.org/0000-0003-3647-8623 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular Cell 65 (5): 779-780. 2 March 2017

Conservation of miRNA-mediated silencing mechanisms across 600 million years of animal evolution.
Mauri, M. ORCID: https://orcid.org/0000-0003-0098-3900, Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X, Aharoni, R., Ciolli Mattioli, C. ORCID: https://orcid.org/0000-0002-8499-1387, van den Bruck, D., Gutkovitch, N., Modepalli, V., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Moran, Y. ORCID: https://orcid.org/0000-0001-9928-9294 and Chekulaeva, M. ORCID: https://orcid.org/0000-0002-6868-7887
Nucleic Acids Research 45 (2): 938-950. 25 January 2017

Quantitative GTPase affinity purification identifies Rho family protein interaction partners.
Paul, F. ORCID: https://orcid.org/0000-0001-5181-3122, Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, von Berg, L., Rocks, O. ORCID: https://orcid.org/0000-0001-6349-9193, Daumke, O. ORCID: https://orcid.org/0000-0002-6190-1414 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular & Cellular Proteomics 16 (1): 73-85. 1 January 2017

2016

Kinetic analysis of protein stability reveals age-dependent degradation.
McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063, Sin, C., Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Wells, J.N., Donnelly, N., Wang, X. ORCID: https://orcid.org/0000-0002-7572-6354, Hou, J., Chen, W. ORCID: https://orcid.org/0000-0003-3263-1627, Storchova, Z., Marsh, J.A., Valleriani, A. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Cell 167 (3): 803-815. 20 October 2016

Quantitative interaction mapping reveals an extended UBX domain in ASPL that disrupts functional p97 hexamers.
Arumughan, A., Roske, Y. ORCID: https://orcid.org/0000-0001-6237-388X, Barth, C., Lleras Forero, L., Bravo-Rodriguez, K., Redel, Al., Kostova, S. ORCID: https://orcid.org/0000-0002-6842-6732, McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063, Opitz, R. ORCID: https://orcid.org/0000-0003-3143-0997, Faelber, K., Rau, K., Mielke, T., Daumke, O. ORCID: https://orcid.org/0000-0002-6190-1414, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Sanchez-Garcia, E., Rocks, O. ORCID: https://orcid.org/0000-0001-6349-9193, Panáková, D. ORCID: https://orcid.org/0000-0002-8739-6225, Heinemann, U. ORCID: https://orcid.org/0000-0002-8191-3850 and Wanker, E.E. ORCID: https://orcid.org/0000-0001-8072-1630
Nature Communications 7 : 13047. 20 October 2016

Hypofunctional TrkA accounts for the absence of pain sensitization in the African naked mole-rat.
Omerbašić, D. ORCID: https://orcid.org/0000-0003-1839-4856, Smith, E.S.J. ORCID: https://orcid.org/0000-0002-2699-1979, Moroni, M. ORCID: https://orcid.org/0000-0002-2389-3468, Homfeld, J., Eigenbrod, O. ORCID: https://orcid.org/0000-0003-0967-5664, Bennett, N.C., Reznick, J. ORCID: https://orcid.org/0000-0001-7921-5466, Faulkes, C.G., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Lewin, G.R. ORCID: https://orcid.org/0000-0002-2890-6352
Cell Reports 17 (3): 748-758. 11 October 2016

Bimodal antagonism of PKA signalling by ARHGAP36.
Eccles, R.L. ORCID: https://orcid.org/0000-0002-8209-5650, Czajkowski, M.T. ORCID: https://orcid.org/0000-0002-0122-1943, Barth, C., Müller, P.M. ORCID: https://orcid.org/0000-0001-9056-4114, McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063, Grunwald, S. ORCID: https://orcid.org/0000-0003-3978-6277, Beaudette, P., Mecklenburg, N., Volkmer, R., Zühlke, K., Dittmar, G. ORCID: https://orcid.org/0000-0003-3647-8623, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Hammes, A. ORCID: https://orcid.org/0000-0003-1663-8378, Daumke, O. ORCID: https://orcid.org/0000-0002-6190-1414, Klussmann, E. ORCID: https://orcid.org/0000-0003-4004-5003, Urbé, S. and Rocks, O. ORCID: https://orcid.org/0000-0001-6349-9193
Nature Communications 7 : 12963. 7 October 2016

Systematic errors in peptide and protein identification and quantification by modified peptides.
Bogdanow, B. ORCID: https://orcid.org/0000-0002-9634-7353, Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular & Cellular Proteomics 15 (8): 2791-2801. 1 August 2016

The mRNA-bound proteome of the early fly embryo.
Wessels, H.H. ORCID: https://orcid.org/0000-0001-5551-404X, Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Baltz, A.G., Kolinski, M., Beldovskaya, A., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Small, S., Ohler, U. ORCID: https://orcid.org/0000-0002-0881-3116 and Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734
Genome Research 26 (7): 1000-1009. July 2016

In vivo interaction proteomics in Caenorhabditis elegans embryos provides new insights into P granule dynamics.
Chen, J.X. ORCID: https://orcid.org/0000-0002-3671-553X, Cipriani, P.G., Mecenas, D., Polanowska, J., Piano, F., Gunsalus, K.C. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular & Cellular Proteomics 15 (5): 1642-1657. 1 May 2016

Ataxin-10 is part of a cachexokine cocktail triggering cardiac metabolic dysfunction in cancer cachexia.
Schaefer, M., Oeing, C.U., Rohm, M., Baysal-Temel, E., Lehmann, L.H., Bauer, R., Volz, H.C., Boutros, M., Sohn, D., Sticht, C., Gretz, N., Eichelbaum, K., Werner, T., Hirt, M.N., Eschenhagen, T., Mueller-Decker, K., Strobel, O., Hackert, T., Krijgsveld, J., Katus, H.A., Berriel Diaz, M., Backs, J. ORCID: https://orcid.org/0000-0002-2322-2699 and Herzig, S.
Molecular Metabolism 5 (2): 67-78. February 2016

Detecting actively translated open reading frames in ribosome profiling data.
Calviello, L. ORCID: https://orcid.org/0000-0002-5600-0988, Mukherjee, N. ORCID: https://orcid.org/0000-0003-0017-1400, Wyler, E. ORCID: https://orcid.org/0000-0002-9884-1806, Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Hirsekorn, A., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734, Obermayer, B. ORCID: https://orcid.org/0000-0002-9116-630X and Ohler, U. ORCID: https://orcid.org/0000-0002-0881-3116
Nature Methods 13 (2): 165-170. February 2016

2015

PI3 kinase and FOXO1 transcription factor activity differentially control B cells in the germinal center light and dark zones.
Sander, S. ORCID: https://orcid.org/0000-0003-4645-3366, Chu, V.T. ORCID: https://orcid.org/0000-0003-1327-8696, Yasuda, T. ORCID: https://orcid.org/0000-0001-9997-6852, Franklin, A., Graf, R. ORCID: https://orcid.org/0000-0002-5400-9938, Calado, D.P. ORCID: https://orcid.org/0000-0001-8239-7184, Li, S., Imami, K. ORCID: https://orcid.org/0000-0002-7451-4982, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Di Virgilio, M. ORCID: https://orcid.org/0000-0001-5189-0793, Bullinger, L. ORCID: https://orcid.org/0000-0002-5890-5510 and Rajewsky, K. ORCID: https://orcid.org/0000-0002-6633-6370
Immunity 43 (6): 1075-1086. 15 December 2015

Isolation of human colon stem cells using surface expression of PTK7.
Jung, P., Sommer, C., Barriga, F.M., Buczacki, S.J., Hernando-Momblona, X., Sevillano, M., Duran-Frigola, M., Aloy, P., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Winton, D.J. and Batlle, E.
Stem Cell Reports 5 (6): 979-987. 8 December 2015

Extensive identification and analysis of conserved small ORFs in animals.
Mackowiak, S.D. ORCID: https://orcid.org/0000-0003-1673-5389, Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Bielow, C. ORCID: https://orcid.org/0000-0001-5756-3988, Thiel, D. ORCID: https://orcid.org/0000-0001-8677-2420, Kutz, K., Calviello, L. ORCID: https://orcid.org/0000-0002-5600-0988, Mastrobuoni, G. ORCID: https://orcid.org/0000-0003-4509-1295, Rajewsky, N. ORCID: https://orcid.org/0000-0002-4785-4332, Kempa, S. ORCID: https://orcid.org/0000-0002-0696-9299, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Obermayer, B. ORCID: https://orcid.org/0000-0002-9116-630X
Genome Biology 16 : 179. 14 September 2015

Cytoskeletal components define protein location to membrane microdomains.
Szymanski, W.G., Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Erban, A., Wu, X.N. and Schulze, W.X.
Molecular & Cellular Proteomics 14 (9): 2493-2509. September 2015

miR-184 regulates pancreatic β-cell function according to glucose metabolism.
Tattikota, S.G. ORCID: https://orcid.org/0000-0003-0318-5533, Rathjen, T., Hausser, J., Khedkar, A., Kabra, U.D., Pandey, V.K., Sury, M.D., Wessels, H.H. ORCID: https://orcid.org/0000-0001-5551-404X, Mollet, I.G., Eliasson, L., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Zinzen, R.P. ORCID: https://orcid.org/0000-0002-8638-5102, Zavolan, M., Kadener, S., Tschöp, M., Jastroch, M., Friedländer, M.R. ORCID: https://orcid.org/0000-0001-6577-4363 and Poy, M.N. ORCID: https://orcid.org/0000-0002-4904-2426
Journal of Biological Chemistry 290 (33): 20284-20294. 14 August 2015

Extensive allele-specific translational regulation in hybrid mice.
Hou, J., Wang, X. ORCID: https://orcid.org/0000-0002-7572-6354, McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063, Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Sun, W. ORCID: https://orcid.org/0000-0001-9607-1361, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Chen, W. ORCID: https://orcid.org/0000-0003-3263-1627
Molecular Systems Biology 11 (8): 825. 7 August 2015

Quantitative affinity purification mass spectrometry: a versatile technology to study protein-protein interactions.
Meyer, K. ORCID: https://orcid.org/0000-0002-8244-6887 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Frontiers in Genetics 6 : 237. July 2015

Quantitative interaction proteomics of neurodegenerative disease proteins.
Hosp, F. ORCID: https://orcid.org/0000-0002-2884-9335, Vossfeldt, H., Heinig, M. ORCID: https://orcid.org/0000-0002-5612-1720, Vasiljevic, D., Arumughan, A., Wyler, E. ORCID: https://orcid.org/0000-0002-9884-1806, Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734, Hubner, N. ORCID: https://orcid.org/0000-0002-1218-6223, Wanker, E.E. ORCID: https://orcid.org/0000-0001-8072-1630, Lannfelt, L., Ingelsson, M., Lalowski, M., Voigt, A. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Cell Reports 11 (7): 1134-1146. 19 May 2015

SILAC for biomarker discovery.
Dittmar, G. ORCID: https://orcid.org/0000-0003-3647-8623 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Proteomics Clinical Applications 9 (3-4): 301-306. April 2015

GABA blocks pathological but not acute TRPV1 pain signals.
Hanack, C., Moroni, M. ORCID: https://orcid.org/0000-0002-2389-3468, Lima, W.C., Wende, H. ORCID: https://orcid.org/0000-0002-9168-8095, Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X, Adelfinger, L., Schrenk-Siemens, K., Tappe-Theodor, A., Wetzel, C. ORCID: https://orcid.org/0000-0003-0587-8018, Kuich, P.H., Gassmann, M., Roggenkamp, D., Bettler, B., Lewin, G.R. ORCID: https://orcid.org/0000-0002-2890-6352, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Siemens, J.
Cell 160 (4): 759-770. 12 February 2015

Quantitative proteomics reveals dynamic interaction of c-Jun N-terminal kinase (JNK) with RNA transport granule proteins splicing factor proline- and glutamine-rich (Sfpq) and non-POU domain-containing octamer-binding protein (Nono) during neuronal differentiation.
Sury, M.D., McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063, Hernandez-Miranda, L.R. ORCID: https://orcid.org/0000-0002-0498-708X, Birchmeier, C. ORCID: https://orcid.org/0000-0002-2041-8872 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular & Cellular Proteomics 14 (1): 50-65. 1 January 2015

Investigation of heart proteome of different consomic mouse strains. Testing the effect of polymorphisms on the proteome-wide trans-variation of proteins.
Forler, S., Klein, O., Koehler, S., Robinson, P.N., Witt, H., Sultan, M., Eravci, M., Regitz-Zagrosek, V., Lehrach, H. and Klose, J.
EuPA Open Proteomics 7 : 27-42. 2015

2014

Assessment of serum protein dynamics by native SILAC flooding (SILflood).
Nolte, H., Hölper, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Braun, T. and Krüger, M.
Analytical Chemistry 86 (22): 11033-11037. 18 November 2014

Drep-2 is a novel synaptic protein important for learning and memory.
Andlauer, T.F.M., Scholz-Kornehl, S., Tian, R., Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X, Babikir, H.A., Depner, H., Loll, B., Quentin, C., Gupta, V.K., Holt, M.G., Dipt, S., Cressy, M., Wahl, M.C., Fiala, A., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Schwärzel, M. and Sigrist, S.J.
eLife 3 : e03895. 13 November 2014

Global characterization of the oocyte-to-embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism.
Stoeckius, M. ORCID: https://orcid.org/0000-0002-5658-029X, Grün, D., Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X, Ayoub, S. ORCID: https://orcid.org/0000-0001-5043-8922, Torti, F., Piano, F., Herzog, M., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Rajewsky, N. ORCID: https://orcid.org/0000-0002-4785-4332
EMBO Journal 33 (16): 1751-1766. 18 August 2014

RNA-binding protein RBM20 represses splicing to orchestrate cardiac pre-mRNA processing.
Maatz, H. ORCID: https://orcid.org/0000-0002-9232-6272, Jens, M. ORCID: https://orcid.org/0000-0002-6660-8743, Liss, M. ORCID: https://orcid.org/0000-0002-0585-7850, Schafer, S., Heinig, M. ORCID: https://orcid.org/0000-0002-5612-1720, Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X, Adami, E. ORCID: https://orcid.org/0000-0002-1813-6681, Rintisch, C., Dauksaite, V. ORCID: https://orcid.org/0000-0002-9399-4731, Radke, M.H. ORCID: https://orcid.org/0000-0003-0112-9917, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Barton, P.J.R., Cook, S.A., Rajewsky, N. ORCID: https://orcid.org/0000-0002-4785-4332, Gotthardt, M. ORCID: https://orcid.org/0000-0003-1788-3172, Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734 and Hubner, N. ORCID: https://orcid.org/0000-0002-1218-6223
Journal of Clinical Investigation 124 (8): 3419-3430. 1 August 2014

In vivo stable isotope labeling by amino acids in Drosophila melanogaster.
Sury, M.D., Chen, J.X. ORCID: https://orcid.org/0000-0002-3671-553X and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Methods in Molecular Biology 1188 : 85-93. 8 July 2014

Identification of importin alpha 7 specific transport cargoes using a proteomic screening approach.
Hügel, S., Depping, R., Dittmar, G. ORCID: https://orcid.org/0000-0003-3647-8623, Rother, F. ORCID: https://orcid.org/0000-0002-4417-2192, Cabot, R., Sury, M.D., Hartmann, E. and Bader, M. ORCID: https://orcid.org/0000-0003-4780-4164
Molecular & Cellular Proteomics 13 (5): 1286-1298. 1 May 2014

Alteration of protein levels during influenza virus H1N1 infection in host cells: a proteomic survey of host and virus reveals differential dynamics.
Kummer, S., Flöttmann, M., Schwanhäusser, B., Sieben, C., Veit, M., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Klipp, E. and Herrmann, A.
PLoS ONE 9 (4): e94257. 9 April 2014

Plasma membrane lipid-protein interactions affect signaling processes in sterol-biosynthesis mutants in Arabidopsis thaliana.
Zauber, H. ORCID: https://orcid.org/0000-0003-2595-1147, Burgos, A., Garapati, P. and Schulze, W.X.
Frontiers in Plant Science 5 : 78. 18 March 2014

Quantitative proteomic analysis of gene regulation by miR-34a and miR-34c.
Ebner, O.A. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
PLoS ONE 9 (3): e92166. 17 March 2014

Suicidal autointegration of Sleeping Beauty and piggyBac transposons in eukaryotic cells.
Wang, Y. ORCID: https://orcid.org/0000-0001-8269-5296, Wang, J. ORCID: https://orcid.org/0000-0002-7027-0298, Devaraj, A. ORCID: https://orcid.org/0000-0002-8685-6728, Singh, M. ORCID: https://orcid.org/0000-0002-8626-5418, Jimenez Orgaz, A., Chen, J.X. ORCID: https://orcid.org/0000-0002-3671-553X, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Ivics, Z. ORCID: https://orcid.org/0000-0002-7803-6658 and Izsvák, Z. ORCID: https://orcid.org/0000-0002-2053-2384
PLoS Genetics 10 (3): e1004103. 13 March 2014

Gene expression: degrade to derepress.
McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
EMBO Journal 33 (5): 407-408. 3 March 2014

Conservation of mRNA and protein expression during development of C. elegans.
Grün, D., Kirchner, M., Thierfelder, N., Stoeckius, M. ORCID: https://orcid.org/0000-0002-5658-029X, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Rajewsky, N. ORCID: https://orcid.org/0000-0002-4785-4332
Cell Reports 6 (3): 565-577. 13 February 2014

Activation of MAPK overrides the termination of myelin growth and replaces Nrg1/ErbB3 signals during Schwann cell development and myelination.
Sheean, M.E. ORCID: https://orcid.org/0000-0003-3055-0495, McShane, E. ORCID: https://orcid.org/0000-0002-7806-2063, Cheret, C. ORCID: https://orcid.org/0000-0001-7382-0403, Walcher, J., Müller, T. ORCID: https://orcid.org/0000-0001-8096-1853, Wulf-Goldenberg, A., Hoelper, S., Garratt, A.N. ORCID: https://orcid.org/0000-0001-9631-3041, Krüger, M., Rajewsky, K. ORCID: https://orcid.org/0000-0002-6633-6370, Meijer, D., Birchmeier, W. ORCID: https://orcid.org/0000-0003-1173-0829, Lewin, G.R. ORCID: https://orcid.org/0000-0002-2890-6352, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Birchmeier, C. ORCID: https://orcid.org/0000-0002-2041-8872
Genes & Development 28 (3): 290-303. 1 February 2014

IPG strip-based peptide fractionation for shotgun proteomics.
Eravci, M., Sommer, C. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Methods in Molecular Biology 1156 : 67-77. 2014

2013

Insm1 controls development of pituitary endocrine cells and requires a SNAG domain for function and for recruitment of histone-modifying factors.
Welcker, J.E., Hernandez-Miranda, L.R. ORCID: https://orcid.org/0000-0002-0498-708X, Paul, F.E. ORCID: https://orcid.org/0000-0001-5181-3122, Jia, S. ORCID: https://orcid.org/0000-0001-8595-9314, Ivanov, A. ORCID: https://orcid.org/0000-0002-4824-1925, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Birchmeier, C. ORCID: https://orcid.org/0000-0002-2041-8872
Development 140 (24): 4947-4958. December 2013

Orchestrated intron retention regulates normal granulocyte differentiation.
Wong, J.J.L., Ritchie, W., Ebner, O.A., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Wong, J.W.H., Huang, Y., Gao, D., Pinello, N., Gonzalez, M., Baidya, K., Thoeng, A., Khoo, T.L., Bailey, C.G., Holst, J. and Rasko, J.E.J.
Cell 154 (3): 583-595. 1 August 2013

Synthesis and degradation jointly determine the responsiveness of the cellular proteome.
Schwanhäusser, B., Wolf, J. ORCID: https://orcid.org/0000-0003-3254-5868, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Busse, D.
BioEssays 35 (7): 597-601. July 2013

Argonaute2 regulates the pancreatic β-cell secretome.
Tattikota, S.G. ORCID: https://orcid.org/0000-0003-0318-5533, Sury, M.D., Rathjen, T., Wessels, H.H. ORCID: https://orcid.org/0000-0001-5551-404X, Pandey, A.K. ORCID: https://orcid.org/0000-0002-8886-1694, You, X. ORCID: https://orcid.org/0000-0002-1684-7084, Becker, C., Chen, W. ORCID: https://orcid.org/0000-0003-3263-1627, Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Poy, M.N. ORCID: https://orcid.org/0000-0002-4904-2426
Molecular & Cellular Proteomics 12 (5): 1214-1225. May 2013

2012

In vivo conditions to identify prkci phosphorylation targets using the analog-sensitive kinase method in zebrafish.
Cibrian Uhalte, E., Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X, Hellwig, N., Allen, J.J., Donat, S. ORCID: https://orcid.org/0000-0003-3901-3733, Shokat, K.M., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Abdelilah-Seyfried, S. ORCID: https://orcid.org/0000-0003-3183-3841
PLoS ONE 7 (6): e40000. 29 June 2012

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz, A.G., Munschauer, M. ORCID: https://orcid.org/0000-0001-6143-4548, Schwanhaeusser, B., Vasile, A. ORCID: https://orcid.org/0000-0001-5452-9960, Murakawa, Y., Schueler, M., Youngs, N., Penfold-Brown, D., Drew, K., Milek, M. ORCID: https://orcid.org/0000-0002-0803-8439, Wyler, E. ORCID: https://orcid.org/0000-0002-9884-1806, Bonneau, R., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Dieterich, C. ORCID: https://orcid.org/0000-0001-9468-6311 and Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734
Molecular Cell 46 (5): 674-690. 8 June 2012

Proteomic analysis of mitotic RNA polymerase II reveals novel interactors and association with proteins dysfunctional in disease.
Moeller, A., Xie, S.Q., Hosp, F. ORCID: https://orcid.org/0000-0002-2884-9335, Lang, B., Phatnani, H.P., James, S., Ramirez, F., Collin, G.B., Naggert, J.K., Babu, M.M., Greenleaf, A.L., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Pombo, A. ORCID: https://orcid.org/0000-0002-7493-6288
Molecular & Cellular Proteomics 11 (6): M111.011767. June 2012

In vivo quantitative proteome profiling: planning and evaluation of SILAC experiments.
Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Methods in Molecular Biology 893 : 175-199. 7 May 2012

2011

Iron regulatory protein-1 and -2: transcriptome-wide definition of binding mRNAs and shaping of the cellular proteome by IRPs.
Sanchez, M., Galy, B., Schwanhaeusser, B., Blake, J., Baehr-Ivacevic, T., Benes, V., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Muckenthaler, M.U. and Hentze, M.W.
Blood 118 (22): e168-e179. 24 November 2011

In vivo-SILAC: Quantitative Analyse der Proteomdynamik [In vivo-SILAC: Quantitative analysis of proteome dynamics].
Kirchner, M. ORCID: https://orcid.org/0000-0002-7049-534X and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Biospektrum 17 (7): 756-758. November 2011

Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR.
Lebedeva, S. ORCID: https://orcid.org/0000-0003-0857-8256, Jens, M. ORCID: https://orcid.org/0000-0002-6660-8743, Theil, K. ORCID: https://orcid.org/0000-0002-7205-6308, Schwanhaeusser, B., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Landthaler, M. ORCID: https://orcid.org/0000-0002-1075-8734 and Rajewsky, N. ORCID: https://orcid.org/0000-0002-4785-4332
Molecular Cell 43 (3): 340-352. 5 August 2011

Analyzing protein-protein interactions by quantitative mass spectrometry.
Paul, F.E. ORCID: https://orcid.org/0000-0001-5181-3122, Hosp, F. ORCID: https://orcid.org/0000-0002-2884-9335 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Methods 54 (4): 387-395. August 2011

Yos9p assists in the degradation of certain non-glycosylated proteins from the endoplasmic reticulum.
Jaenicke, L.A., Brendebach, H., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Hirsch, C.
Molecular Biology of the Cell 22 (16): 2937-2945. August 2011

Global quantification of mammalian gene expression control.
Schwanhaeusser, B., Busse, D., Li, N. ORCID: https://orcid.org/0000-0001-6163-1648, Dittmar, G. ORCID: https://orcid.org/0000-0003-3647-8623, Schuchhardt, J., Wolf, J. ORCID: https://orcid.org/0000-0003-3254-5868, Chen, W. ORCID: https://orcid.org/0000-0003-3263-1627 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Nature 473 (7347): 337-342. 19 May 2011

Whole cell proteome regulation by microRNAs captured in a pulsed SILAC mass spectrometry approach.
Ebner, O.A. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Methods in Molecular Biology 725 : 315-331. 2011

2010

The SILAC fly allows for accurate protein quantification in vivo.
Sury, M.D., Chen, J.X. ORCID: https://orcid.org/0000-0002-3671-553X and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Molecular & Cellular Proteomics 9 (10): 2173-2183. October 2010

The versatility of Helicobacter pylori CagA effector protein functions: the master key hypothesis.
Backert, S., Tegtmeyer, N. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Helicobacter 15 (3): 163-176. June 2010

Quantitative proteomics reveals subset-specific viral recognition in dendritic cells.
Luber, C.A., Cox, J., Lauterbach, H., Fancke, B., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Tschopp, J., Akira, S., Wiegand, M., Hochrein, H., O'Keeffe, M. and Mann, M.
Immunity 32 (2): 279-289. 26 February 2010

2009

Quantitative proteomics: a tool to assess cell differentiation.
Vermeulen, M. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Current Opinion in Cell Biology 21 (6): 761-766. December 2009

The tyrosine phosphatase Shp2 (PTPN11) directs neuregulin-1/ErbB signaling throughout schwann cell development.
Grossmann, K.S., Wende, H. ORCID: https://orcid.org/0000-0002-9168-8095, Paul, F.E. ORCID: https://orcid.org/0000-0001-5181-3122, Cheret, C. ORCID: https://orcid.org/0000-0001-7382-0403, Garratt, A.N. ORCID: https://orcid.org/0000-0001-9631-3041, Zurborg, S., Feinberg, K., Besser, D. ORCID: https://orcid.org/0000-0002-4958-9624, Schulz, H. ORCID: https://orcid.org/0000-0002-0226-964X, Peles, E., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Birchmeier, W. ORCID: https://orcid.org/0000-0003-1173-0829 and Birchmeier, C. ORCID: https://orcid.org/0000-0002-2041-8872
Proceedings of the National Academy of Sciences of the United States of America 106 (39): 16704-16709. 29 September 2009

Novel insights into proteomic technologies and their clinical perspective.
Dittmar, G. ORCID: https://orcid.org/0000-0003-3647-8623 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Genome Medicine 1 (5): 53. 21 May 2009

Host cell interactome of tyrosine-phosphorylated bacterial proteins.
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Paul, F.E. ORCID: https://orcid.org/0000-0001-5181-3122, Brandt, S., Guye, P., Daumke, O. ORCID: https://orcid.org/0000-0002-6190-1414, Backert, S., Dehio, C. and Mann, M.
Cell Host & Microbe 5 (4): 397-403. 23 April 2009

Global analysis of cellular protein translation by pulsed SILAC.
Schwanhaeusser, B., Gossen, M. ORCID: https://orcid.org/0000-0002-1761-4063, Dittmar, G. ORCID: https://orcid.org/0000-0003-3647-8623 and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Proteomics 9 (1): 205-209. January 2009

A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics.
Cox, J., Matic, I., Hilger, M., Nagaraj, N., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Olsen, J.V. and Mann, M.
Nature Protocols 4 (5): 698-705. 2009

2008

Complex kinase requirements for Chlamydia trachomatis Tarp phosphorylation.
Mehlitz, A., Banhart, S., Hess, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Meyer, T.F.
FEMS Microbiology Letters 289 (2): 233-240. December 2008

Widespread changes in protein synthesis induced by microRNAs.
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Schwanhaeusser, B., Thierfelder, N., Fang, Z., Khanin, R. and Rajewsky, N. ORCID: https://orcid.org/0000-0002-4785-4332
Nature 455 (7209): 58-63. 4 September 2008

Role of type IV secretion in Helicobacter pylori pathogenesis.
Backert, S. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Cellular Microbiology 10 (8): 1573-1581. August 2008

2007

The Helicobacter pylori CagA protein disrupts matrix adhesion of gastric epithelial cells by dephosphorylation of vinculin.
Moese, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Brinkmann, V., Karlas, A., Haimovich, B., Backert, S. and Meyer, T.F.
Cellular Microbiology 9 (5): 1148-1161. May 2007

2006

Protein interaction screening by quantitative immunoprecipitation combined with knockdown (QUICK).
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Mann, M.
Nature Methods 3 (12): 981-983. December 2006

Robust Salmonella metabolism limits possibilities for new antimicrobials.
Becker, D., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Rollenhagen, C., Ballmaier, M., Meyer, T.F., Mann, M. and Bumann, D.
Nature 440 (7082): 303-307. 16 March 2006

2005

Tyrosine-phosphorylated bacterial effector proteins: the enemies within.
Backert, S. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Trends in Microbiology 13 (10): 476-484. October 2005

Analysis of cell type-specific responses mediated by the type IV secretion system of Helicobacter pylori.
Bauer, B., Moese, S., Bartfeld, S., Meyer, T.F. and Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751
Infection and Immunity 73 (8): 4643-4652. August 2005

Cortactin: an Achilles' heel of the actin cytoskeleton targeted by pathogens.
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Backert, S.
Trends in Microbiology 13 (4): 181-189. April 2005

Subproteomes of soluble and structure-bound Helicobacter pylori proteins analyzed by two-dimensional gel electrophoresis and mass spectrometry.
Backert, S., Kwok, T., Schmidt, M., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Moese, S., Peek, R.M., Koenig, W., Meyer, T.F. and Jungblut, P.R.
Proteomics 5 (5): 1331-1345. April 2005

2004

The Helicobacter pylori CagA protein induces tyrosine dephosphorylation of ezrin.
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Moese, S., Backert, S., Jungblut, P.R. and Meyer, T.F.
Proteomics 4 (10): 2961-2968. October 2004

Helicobacter pylori induces AGS cell motility and elongation via independent signaling pathways.
Moese, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Kwok, T., Brinkmann, V., Koenig, W., Meyer, T.F. and Backert, S.
Infection and Immunity 72 (6): 3646-3649. June 2004

2003

The Helicobacter pylori CagA protein induces cortactin dephosphorylation and actin rearrangement by c-Src inactivation.
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Moese, S., Hurwitz, R., Hauck, C.R., Meyer, T.F. and Backert, S.
EMBO Journal 22 (3): 515-528. 3 February 2003

2002

cag+ Helicobacter pylori induces homotypic aggregation of macrophage-like cells by up-regulation and recruitment of intracellular adhesion molecule 1 to the cell surface.
Moese, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Meyer, T.F. and Backert, S.
Infection and Immunity 70 (8): 4687-4691. August 2002

Src is the kinase of the Helicobacter pylori CagA protein in vitro and in vivo.
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Moese, S., Hauck, C.R., Meyer, T.F. and Backert, S.
Journal of Biological Chemistry 277 (9): 6775-6778. 1 March 2002

Functional analysis of the Helicobacter pylori cag pathogenicity island reveals both VirD4-CagA-dependent and VirD4-CagA-independent mechanisms.
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Moese, S., Meyer, T.F. and Backert, S.
Infection and Immunity 70 (2): 665-671. February 2002

2001

Phosphorylation of tyrosine 972 of the Helicobacter pylori CagA protein is essential for induction of a scattering phenotype in gastric epithelial cells.
Backert, S., Moese, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Brinkmann, V. and Meyer, T.F.
Molecular Microbiology 42 (3): 631-644. November 2001

Identification of a tyrosine-phosphorylated 35 kDa carboxy-terminal fragment (p35CagA) of the Helicobacter pylori CagA protein in phagocytic cells: processing or breakage?
Moese, S., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Zimny-Arndt, U., Jungblut, P.R., Meyer, T.F. and Backert, S.
Proteomics 1 (4): 618-629. April 2001

A new home for infection research.
Kamradt, T., Rudel, T., Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Schaible, U.E.
Trends in Microbiology 9 (2): 54-56. February 2001

1999

Structure, fluorescent properties and proposed function in phototaxis of the stigma apparatus in the ciliate chlamydodon mnemosyne.
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751 and Kuhlmann, H.W.
Journal of Experimental Biology 202 (Pt 8): 919-927. April 1999

Phototaxis in Chlamydodon mnemosyne: Determination of the illuminance-response curve and the action spectrum.
Selbach, M. ORCID: https://orcid.org/0000-0003-2454-8751, Haeder, D.P. and Kuhlmann, H.W.
Journal of Photochemistry and Photobiology B 49 (1): 35-40. March 1999