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Quantification of insect genome divergence.
Zdobnov, E.M. and Bork, P.
Trends in Genetics 23 (1): 16-20. January 2007

Computational characterization of multiple Gag-like human proteins.
Campillos, M. and Doerks, T. and Shah, P.K. and Bork, P.
Trends in Genetics 22 (11): 585-589. November 2006

A whole lotta jumpin' goin' on: new transposon tools for vertebrate functional genomics.
Ivics, Z. and Izsvak, Z.
Trends in Genetics 21 (1): 8-11. 1 January 2005

Global analysis of bacterial transcription factors to predict cellular target processes.
Doerks, T. and Andrade, M.A. and Lathe, W. and von Mering, C. and Bork, P.
Trends in Genetics 20 (3): 126-131. 1 January 2004

Increase of functional diversity by alternative splicing.
Kriventseva, E.V. and Koch, I. and Apweiler, R. and Vingron, M. and Bork, P. and Gelfand, M.S. and Sunyaev, S.
Trends in Genetics 19 (3): 124-128. March 2003

Integration of genome data and protein structures: prediction of protein folds, protein interactions and 'molecular phenotypes' of single nucleotide polymorphisms (Reprinted from Current Opinion in Structural Biology, vol 11, pg 125-130, 2001).
Sunyaev, S.R. and Lathe, W. and Bork, P.
Trends in Genetics (Suppl. March): S19-S24. March 2002

Genomics boosts mouse molecular genetics.
Birchmeier, C. and Treier, M.
Trends in Genetics 17 (12): 691-692. 1 December 2001

Inversions and the dynamics of eukaryotic gene order.
Huynen, M.A. and Snel, B. and Bork, P.
Trends in Genetics 17 (6): 304-306. 1 June 2001

Identification and analysis of eukaryotic promoters: recent computational approaches.
Ohler, U. and Niemann, H.
Trends in Genetics 17 (2): 56-60. February 2001

Evolution of prokaryotic gene order: genome rearrangements in closely related species.
Suyama, M. and Bork, P.
Trends in Genetics 17 (1): 10-13. 1 January 2001

SNP frequencies in human genes - an excess of rare alleles and differing modes of selection.
Sunyaev, S.R. and Lathe, W.C. and Ramensky, V.E. and Bork, P.
Trends in Genetics 16 (8): 335-337. 1 August 2000

Protein annotation: detective work for function prediction.
Doerks, T. and Bairoch, A. and Bork, P.
Trends in Genetics 14 : 248-250. 1 January 1998

Go hunting in sequence databases but watch out for the traps.
Bork, P. and Bairoch, A.
Trends in Genetics 12 : 425-427. 1 January 1996

Identification of mammalian cell clones exhibiting highly regulated expression from inducible promoters.
Kirchhoff, S. and Koster, M. and Wirth, M. and Schaper, F. and Gossen, M. and Bujard, H. and Hauser, H.
Trends in Genetics 11 (6): 219-220. June 1995


Gene therapy with the Sleeping Beauty transposon system.
Kebriaei, P. and Izsvák, Z. and Narayanavari, S.A. and Singh, H. and Ivics, Z.
Trends in Genetics 33 (11): 852-870. November 2017

Beyond read-counts: Ribo-seq data analysis to understand the functions of the transcriptome.
Calviello, L. and Ohler, U.
Trends in Genetics 33 (10): 728-744. October 2017

Breaking TADs: how alterations of chromatin domains result in disease.
Lupiáñez, D.G. and Spielmann, M. and Mundlos, S.
Trends in Genetics 32 (4): 225-237. April 2016

The route to spinal cord cell types: a tale of signals and switches.
Gouti, M. and Metzis, V. and Briscoe, J.
Trends in Genetics 31 (6): 282-289. June 2015

How to become a parasite - lessons from the genomes of nematodes.
Dieterich, C. and Sommer, R.J.
Trends in Genetics 25 (5): 203-209. May 2009

SHOT: a web server for the construction of genome phylogenies.
Korbel, J.O. and Snel, B. and Huynen, M.A. and Bork, P.
Trends in Genetics 18 : 158-162. 1 March 2002

Resident aliens: the Tc1/mariner superfamily of transposable elements.
Plasterk, R.H. and Izsvak, Z. and Ivics, Z.
Trends in Genetics 15 : 326-332. 1 August 1999


Differential genome display.
Huynen, M.A. and Diaz-Lazcoz, Y. and Bork, P.
Trends in Genetics 13 : 389-390. 1 January 1997

Non-orthologous gene displacement.
Koonin, E.V. and Mushegian, A.R. and Bork, P.
Trends in Genetics 12 : 334-336. 1 January 1996


Similar gene expression profiles do not imply similar tissue functions.
Yanai, I. and Korbel, J.O. and Boue, S. and McWeeney, S.K. and Bork, P. and Lercher, M.J.
Trends in Genetics 22 (3): 132-138. March 2006

Modularity in the gain and loss of genes: applications for function prediction.
Ettema, T. and van der Oost, J. and Huynen, M.
Trends in Genetics 17 (9): 485-487. September 2001

EST analysis online: WWW tools for detection of SNPs and alternative splice forms.
Brett, D. and Lehmann, G. and Hanke, J. and Gross, S. and Reich, J. and Bork, P.
Trends in Genetics 16 (9): 416-418. 1 September 2000

Towards a structural basis of human non-synonymous single nucleotide polymorphisms.
Sunyaev, S.R. and Ramensky, V. and Bork, P.
Trends in Genetics 16 (5): 198-200. 1 May 2000

Genome evolution - gene fusion versus gene fission.
Snel, B. and Bork, P. and Huynen, M.
Trends in Genetics 16 : 9-11. 1 January 2000

Alternative splicing of human genes - more the rule than the exception?
Hanke, J. and Brett, D. and Zastrow, I. and Aydin, A. and Delbrueck, S. and Lehmann, G. and Luft, F.C. and Reich, J. and Bork, P.
Trends in Genetics 15 : 389-390. 1 October 1999

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