Article
miR-7 controls glutamatergic transmission and neuronal connectivity in a Cdr1as-dependent manner.
Cerda Jara, C.A., Kim, S.J., Thomas, G., Farsi, Z., Zolotarov, G., Dube, G., Deter, A., Bahry, E., Georgii, E., Woehler, A., Piwecka, M. and Rajewsky, N.
EMBO Reports 25
(7): 3039.
July 2024
MarShie: a clearing protocol for 3D analysis of single cells throughout the bone marrow at subcellular resolution.
Mertens, T.F., Liebheit, A.T., Ehl, J., Köhler, R., Rakhymzhan, A., Woehler, A., Katthän, L., Ebel, G., Liublin, W., Kasapi, A., Triantafyllopoulou, A., Schulz, T.J., Niesner, R.A. and Hauser, A.E.
Nature Communications 15
(1): 1764.
26 February 2024
Spatiotemporal, optogenetic control of gene expression in organoids.
Legnini, I., Emmenegger, L., Zappulo, A., Rybak-Wolf, A., Wurmus, R., Oliveras Martinez, A., Cerda Jara, C., Boltengagen, A., Hessler, T., Mastrobuoni, G., Kempa, S., Zinzen, R., Woehler, A. and Rajewsky, N.
Nature Methods 20
(10): 1544-1552.
October 2023
Prox2 and Runx3 vagal sensory neurons regulate esophageal motility.
Lowenstein, E.D., Ruffault, P.L., Misios, A., Osman, K.L., Li, H., Greenberg, R.S., Thompson, R., Song, K., Dietrich, S., Li, X., Vladimirov, N., Woehler, A., Brunet, J.F., Zampieri, N., Kühn, R., Liberles, S.D., Jia, S., Lewin, G.R., Rajewsky, N., Lever, T.E. and Birchmeier, C.
Neuron 111
(14): 2184-2200.e7.
19 July 2023
Modelling viral encephalitis caused by herpes simplex virus 1 infection in cerebral organoids.
Rybak-Wolf, A., Wyler, E., Pentimalli, T.M., Legnini, I., Oliveras Martinez, A., Glažar, P., Loewa, A., Kim, S.J., Kaufer, B.B., Woehler, A., Landthaler, M. and Rajewsky, N.
Nature Microbiology 8
(7): 1252-1266.
July 2023
Establishment of gastrointestinal assembloids to study the interplay between epithelial crypts and their mesenchymal niche.
Lin, M., Hartl, K., Heuberger, J., Beccaceci, G., Berger, H., Li, H., Liu, L., Müllerke, S., Conrad, T., Heymann, F., Woehler, A., Tacke, F., Rajewsky, N. and Sigal, M.
Nature Communications 14
(1): 3025.
25 May 2023
A hydraulic feedback loop between mesendoderm cell migration and interstitial fluid relocalization promotes embryonic axis formation in zebrafish.
Huljev, K., Shamipour, S., Pinheiro, D., Preusser, F., Steccari, I., Sommer, C.M., Naik, S. and Heisenberg, C.P.
Developmental Cell 58
(7): 582-596.e7.
10 April 2023
RS-FISH: precise, interactive, fast, and scalable FISH spot detection.
Bahry, E., Breimann, L., Zouinkhi, M., Epstein, L., Kolyvanov, K., Mamrak, N., King, B., Long, Xi, Harrington, K.I.S., Lionnet, T. and Preibisch, S.
Nature Methods 19
(12): 1563-1567.
December 2022
Pathogenic variants damage cell composition and single cell transcription in cardiomyopathies.
Reichart, D., Lindberg, E.L., Maatz, H., Miranda, A.M.A., Viveiros, A., Shvetsov, N., Gärtner, A., Nadelmann, E.R., Lee, M., Kanemaru, K., Ruiz-Orera, J., Strohmenger, V., DeLaughter, D.M., Patone, G., Zhang, H., Woehler, A., Lippert, C., Kim, Y., Adami, E., Gorham, J.M., Barnett, S.N., Brown, K., Buchan, R.J., Chowdhury, R.A., Constantinou, C., Cranley, J., Felkin, L.E., Fox, H., Ghauri, A., Gummert, J., Kanda, M., Li, R., Mach, L., McDonough, B., Samari, S., Shahriaran, F., Yapp, C., Stanasiuk, C., Theotokis, P.I., Theis, F.J., van den Bogaerdt, A., Wakimoto, H., Ware, J.S., Worth, C.L., Barton, P.J.R., Lee, Y.A., Teichmann, S.A., Milting, H., Noseda, M., Oudit, G.Y., Heinig, M., Seidman, J.G., Hubner, N. and Seidman, C.E.
Science 377
(6606): eabo1984.
5 August 2022
Pregnancy-induced maternal microchimerism shapes neurodevelopment and behavior in mice.
Schepanski, S., Chini, M., Sternemann, V., Urbschat, C., Thiele, K., Sun, T., Zhao, Y., Poburski, M., Woestemeier, A., Thieme, M.T., Zazara, D.E., Alawi, M., Fischer, N., Heeren, J., Vladimirov, N., Woehler, A., Puelles, V.G., Bonn, S., Gagliani, N., Hanganu-Opatz, I.L. and Arck, P.C.
Nature Communications 13
(1): 4571.
5 August 2022
The histone H4 lysine 20 demethylase DPY-21 regulates the dynamics of condensin DC binding.
Breimann, L., Morao, A.K., Kim, J., Jimenez, D.S., Maryn, N., Bikkasani, K., Carrozza, M.J., Albritton, S.E., Kramer, M., Street, L.A., Cerimi, K., Schumann, V.F., Bahry, E., Preibisch, S., Woehler, A. and Ercan, S.
Journal of Cell Science 135
(2): jcs258818.
January 2022
Dual-view light-sheet imaging through a tilted glass interface using a deformable mirror.
Vladimirov, N., Preusser, F., Wisniewski, J., Yaniv, Z., Desai, R.A., Woehler, A. and Preibisch, S.
Biomedical Optics Express 12
(4): 2186-2203.
1 April 2021
Single synapse glutamate imaging reveals multiple levels of release mode regulation in mammalian synapses.
Farsi, Z., Walde, M., Klementowicz, A.E., Paraskevopoulou, F. and Woehler, A.
iScience 24
(1): 101909.
22 January 2021
Uncoupling endosomal CLC chloride/proton exchange causes severe neurodegeneration.
Weinert, S., Gimber, N., Deuschel, D., Stuhlmann, T., Puchkov, D., Farsi, Z., Ludwig, C.F., Novarino, G., López-Cayuqueo, K.I., Planells-Cases, R. and Jentsch, T.J.
EMBO Journal 39
(9): e103358.
4 May 2020
Teashirt 1 (Tshz1) is essential for the development, survival and function of hypoglossal and phrenic motor neurons in mouse.
Chaimowicz, C., Ruffault, P.L., Chéret, C., Woehler, A., Zampieri, N., Fortin, G., Garratt, A.N. and Birchmeier, C.
Development 146
(17): dev174045.
6 September 2019
Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments.
Ciolli Mattioli, C., Rom, A., Franke, V., Imami, K., Arrey, G., Terne, M., Woehler, A., Akalin, A., Ulitsky, I. and Chekulaeva, M.
Nucleic Acids Research 47
(5): 2560-2573.
18 March 2019
Clathrin coat controls synaptic vesicle acidification by blocking vacuolar ATPase activity.
Farsi, Z., Gowrisankaran, S., Krunic, M., Rammner, B., Woehler, A., Lafer, E.M., Mim, C., Jahn, R. and Milosevic, I.
eLife 7
: e32569.
13 April 2018
RNA localization is a key determinant of neurite-enriched proteome.
Zappulo, A., van den Bruck, D., Ciolli Mattioli, C., Franke, V., Imami, K., McShane, E., Moreno-Estelles, M., Calviello, L., Filipchyk, A., Peguero-Sanchez, E., Müller, T., Woehler, A., Birchmeier, C., Merino, E., Rajewsky, N., Ohler, U., Mazzoni, E.O., Selbach, M., Akalin, A. and Chekulaeva, M.
Nature Communications 8
(1): 583.
19 September 2017
Engineering an achromatic Bessel beam using a phase-only spatial light modulator and an iterative Fourier transformation algorithm.
Walde, M., Jost, A., Wicker, K. and Heintzmann, R.
Optics Communications 383
: 64-68.
15 January 2017
Imaging activity-dependent signaling dynamics at the neuronal synapse using FRET-based biosensors.
Farsi, Z. and Woehler, A.
Methods in Molecular Biology 1538
: 261-275.
2017
Superpriming of synaptic vesicles as a common basis for intersynapse variability and modulation of synaptic strength.
Taschenberger, H., Woehler, A. and Neher, E.
Proceedings of the National Academy of Sciences of the United States of America 113
(31): E4548-E4557.
2 August 2016
Single-vesicle imaging reveals different transport mechanisms between glutamatergic and GABAergic vesicles.
Farsi, Z., Preobraschenski, J., van den Bogaart, G., Riedel, D., Jahn, R. and Woehler, A.
Science 351
(6276): 981-984.
26 February 2016
The Green Gut: chlorophyll degradation in the gut of Spodoptera littoralis.
Badgaa, A., Büchler, R., Wielsch, N., Walde, M., Heintzmann, R., Pauchet, Y., Svatos, A., Ploss, K. and Boland, W.
Journal of Chemical Ecology 41
(11): 965-974.
November 2015
Calcium-buffering effects of gluconate and nucleotides, as determined by a novel fluorimetric titration method.
Woehler, A., Lin, K.H. and Neher, E.
Journal of Physiology 592
(22): 4863-4875.
15 November 2014
Vinculin binding angle in podosomes revealed by high resolution microscopy.
Walde, M., Monypenny, J., Heintzmann, R., Jones, G.E. and Cox, S.
PLoS ONE 9
(2): e88251.
11 February 2014
Blocking endocytosis enhances short-term synaptic depression under conditions of normal availability of vesicles.
Hua, Y., Woehler, A., Kahms, M., Haucke, V., Neher, E. and Klingauf, J.
Neuron 80
(2): 343-349.
16 October 2013
Functional analysis of PEX13 mutation in a Zellweger syndrome spectrum patient reveals novel homooligomerization of PEX13 and its role in human peroxisome biogenesis.
Krause, C., Rosewich, H., Woehler, A. and Gärtner, J.
Human Molecular Genetics 22
(19): 3844-3857.
1 October 2013
Simultaneous quantitative live cell imaging of multiple FRET-based biosensors.
Woehler, A.
PLoS ONE 8
(4): e61096.
16 April 2013
Heterodimerization of serotonin receptors 5-HT1A and 5-HT7 differentially regulates receptor signalling and trafficking.
Renner, U., Zeug, A., Woehler, A., Niebert, M., Dityatev, A., Dityateva, G., Gorinski, N., Guseva, D., Abdel-Galil, D., Froehlich, M., Doering, F., Wischmeyer, E., Richter, D.W., Neher, E. and Ponimaskin, E.G.
Journal of Cell Science 125
(Pt 10): 2486-2499.
15 May 2012
Signal/noise analysis of FRET-based sensors.
Woehler, A., Wlodarczyk, J. and Neher, E.
Biophysical Journal 99
(7): 2344-2354.
6 October 2010
G protein - mediated signaling: same receptor, multiple effectors.
Woehler, A. and Ponimaskin, E.G.
Current Molecular Pharmacology 2
(3): 237-248.
November 2009
Specific oligomerization of the 5-HT1A receptor in the plasma membrane.
Woehler, A., Wlodarczyk, J. and Ponimaskin, E.G.
Glycoconjugate Journal 26
(6): 749-756.
August 2009
Stimulation- and palmitoylation-dependent changes in oligomeric conformation of serotonin 5-HT1A receptors.
Kobe, F., Renner, U., Woehler, A., Wlodarczyk, J., Papusheva, E., Bao, G., Zeug, A., Richter, D., Neher, E. and Ponimaskin, E.
Biochimica et Biophysica Acta - Molecular Cell Research 1783
(8): 1503-1516.
August 2008
Analysis of FRET signals in the presence of free donors and acceptors.
Wlodarczyk, J., Woehler, A., Kobe, F., Ponimaskin, E., Zeug, A. and Neher, E.
Biophysical Journal 94
(3): 986-1000.
1 February 2008
Review
Proton electrochemical gradient: driving and regulating neurotransmitter uptake.
Farsi, Z., Jahn, R. and Woehler, A.
BioEssays 39
(5): 1600240.
May 2017
Quantitative intensity-based FRET approaches - a comparative snapshot.
Zeug, A., Woehler, A., Neher, E. and Ponimaskin, E.
Biophysical Journal 103
(9): 1821-1827.
7 November 2012
Preprint
Neuromuscular dysfunction in patient-derived FUS(R244RR)-ALS iPSC model via axonal downregulation of neuromuscular junction proteins.
von Kuegelgen, N., Ludwik, K., Mendonsa, S., Roemer, C., Becher, E., Breimann, L., Strauch, M., Mari, T., Mongellaz, S., Zuckerman, B., Grexa, N., Oliveras-Martinez, A., Woehler, A., Selbach, M., La Bella, V., Ulitsky, I. and Chekulaeva, M.
bioRxiv
: 2024.08.17.607965.
17 August 2024
Spatio-temporal, optogenetic control of gene expression in organoids.
Legnini, I., Emmenegger, L., Zappulo, A., Wurmus, R., Oliveras Martinez, A., Cerda Jara, C., Boltengagen, A., Hessler, T., Mastrobuoni, G., Rybak-Wolf, A., Kempa, S., Zinzen, R.P., Woehler, A. and Rajewsky, N.
bioRxiv
: 2021.09.26.461850v3.
9 February 2022
Neurodegeneration in human brain organoids infected with herpes simplex virus type 1.
Rybak-Wolf, A., Wyler, E., Legnini, I., Loewa, A., Glažar, P., Kim, S.J., Pentimalli, T.M., Oliveras Martinez, A., Beyersdorf, B., Woehler, A., Landthaler, M. and Rajewsky, N.
bioRxiv
: 2021.03.05.434122.
7 March 2021
This list was generated on Thu Nov 21 08:38:41 2024 UTC.