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Article

Trends in biochemical systems : Computational analysis of biochemical systems.
Dandekar, T.
Trends in Biochemical Sciences 26 : 637. 1 January 2004

The KIND module: a putative signalling domain evolved from the C lobe of the protein kinase fold.
Ciccarelli, F.D., Bork, P. and Kerkhoff, E.
Trends in Biochemical Sciences 28 (7): 349-352. 7 July 2003

Computational analysis of biochemical systems (book review).
Dandekar, T.
Trends in Biochemical Sciences 26 : 637-637. 1 January 2003

Cellular genomics: which genes are transcribed, when and where?
Pombo, A.
Trends in Biochemical Sciences 28 (1): 6-9. January 2003

BSD: a novel domain in transcription factors and synapse-associated proteins.
Doerks, T., Huber, S., Buchner, E. and Bork, P.
Trends in Biochemical Sciences 27 (4): 168-170. 1 April 2002

CASH - a beta-helix domain widespread among carbohydrate-binding proteins.
Ciccarelli, F.D., Copley, R.R., Doerks, T., Russell, R.B. and Bork, P.
Trends in Biochemical Sciences 27 (2): 59-62. 1 January 2002

AMOP, a protein module aternativelly spliced in cancer cells.
Ciccarelli, F.D., Doerks, T. and Bork, P.
Trends in Biochemical Sciences 27 : 113-115. 1 January 2002

DDT - a novel domain in different transcription and chromosome remodeling factors.
Doerks, T., Copley, R. and Bork, P.
Trends in Biochemical Sciences 26 : 145-146. 1 January 2001

LG/LNS domains: multiple functions - one business end?
Rudenko, G., Hohenester, E. and Muller, Y.A.
Trends in Biochemical Sciences 26 (6): 363-368. 1 January 2001

Gene context conservation of a higher order than operons.
Lathe, W.C., Snel, B. and Bork, P.
Trends in Biochemical Sciences 25 (10): 474-479. 1 October 2000

L27, a novel heterodimerization domain in receptor targeting proteins Lin-2 and Lin-7.
Doerks, T., Bork, P., Kamberov, E., Makarova, O., Muecke, S. and Margolis, B.
Trends in Biochemical Sciences 25 : 317-318. 1 July 2000

Automated annotation of GPI anchor sites: case study C-elegans.
Eisenhaber, B., Bork, P., Yuan, Y.P., Loeffler, G. and Eisenhaber, F.
Trends in Biochemical Sciences 25 (7): 340-341. 1 July 2000

The GeneQuiz web server: protein functional analysis through the Web.
Hoersch, S., Leroy, C., Brown, N.P., Andrade, M.A. and Sander, C.
Trends in Biochemical Sciences 25 (1): 33-35. 28 January 2000

Domains in plexins: links to integrins and transcription factors.
Bork, P., Doerks, T., Springer, T.A. and Snel, B.
Trends in Biochemical Sciences 24 : 261-263. 1 July 1999

A novel transactivation domain in parkin.
Morett, E. and Bork, P.
Trends in Biochemical Sciences 24 : 229-231. 1 June 1999

Conservation of gene order: a fingerprint of proteins that physically interact.
Dandekar, T., Snel, B., Huynen, M. and Bork, P.
Trends in Biochemical Sciences 23 (9): 324-328. 1 September 1998

Unified nomenclature for subunits of the Saccharomyces cerevisiae proteasome regulatory particle.
Finley, D., Tanaka, K., Mann, C., Feldmann, H., Hochstrasser, M., Vierstra, R., Johnston, S., Hampton, R., Haber, J., Mccusker, J., Silver, P., Frontali, L., Thorsness, P., Varshavsky, A., Byers, B., Madura, K., Reed, S.I., Wolf, D., Jentsch, S., Sommer, T., Baumeister, W., Goldberg, A., Fried, V., Rubin, D.M. and Toh-e, A.
Trends in Biochemical Sciences 23 (7): 244-245. 1 July 1998

A putative nucleic acid-binding domain in Werner's and Bloom's syndrome helicases.
Morozov, V., Mushegian, A.R., Koonin, E.V. and Bork, P.
Trends in Biochemical Sciences 22 : 417-418. 1 January 1997

SPRY domains in ryanodine receptors (Ca2+ release channels).
Ponting, C., Schultz, J. and Bork, P.
Trends in Biochemical Sciences 22 : 193-194. 1 January 1997

Ancient duplication of dna polymerase inferred from analysis of complete bacterial genomes.
Koonin, E.V. and Bork, P.
Trends in Biochemical Sciences 21 (4): 128-129. 1 January 1996

Pleckstrin's repeat performance: a novel domain in g protein signaling.
Ponting, C.P. and Bork, P.
Trends in Biochemical Sciences 21 : 245-246. 1 January 1996

Ready for a motif submission? A proposed checklist.
Bork, P., Ouzounis, C. and McEntyre, J.
Trends in Biochemical Sciences 20 (3): 104-104. 1 January 1995

More WW domains.
Bork, P. and Sudol, M.
Trends in Biochemical Sciences 20 : 54-54. 1 January 1995

The WW domain: a signalling site in dystrophin.
Bork, P. and Sudol, M.
Trends in Biochemical Sciences 19 (12): 531-533. 1 December 1994

An adhesive domain detected in functionally diverse receptors.
Beckmann, G. and Bork, P.
Trends in Biochemical Sciences 18 : 40-41. 1 January 1993

Exopolyphosphate phosphatase and guanosine pentaphosphate phosphatase belong to the sugar kinase/actin/hsp70 superfamily.
Reizer, J., Reizer, A., Saier, M.H., Bork, P. and Sander, C.
Trends in Biochemical Sciences 18 : 247-248. 1 January 1993

A module of DnaJ heat shock proteins found in malaria parasites.
Bork, P., Sander, C., Valencia, A. and Bukau, B.
Trends in Biochemical Sciences 17 : 129-129. 1 January 1992

Schroedinger and Delbrueck: their status in biology.
Symonds, N.
Trends in Biochemical Sciences 13 (6): 232-234. June 1988

Review

Charting a DNA repair roadmap for immunoglobulin class switch recombination.
Saha, T., Sundaravinayagam, D. and Di Virgilio, M.
Trends in Biochemical Sciences 46 (3): 184-199. March 2021

Building functional modules from molecular interactions.
Hofmann, K.P., Spahn, C.M.T., Heinrich, R. and Heinemann, U.
Trends in Biochemical Sciences 31 (9): 497-508. September 2006

The hunt for huntingtin function: interaction partners tell many different stories.
Harjes, P. and Wanker, E.E.
Trends in Biochemical Sciences 28 (8): 425-433. August 2003

Metabolites: a helping hand for pathway evolution?
Schmidt, S., Sunyaev, S., Bork, P. and Dandekar, T.
Trends in Biochemical Sciences 28 (6): 336-341. June 2003

Cytoplasmic signalling domains: the next generation.
Bork, P., Schultz, J. and Ponting, C.P.
Trends in Biochemical Sciences 22 : 296-298. 1 January 1997

Letter

iPath: interactive exploration of biochemical pathways and networks.
Letunic, I., Yamada, T., Kanehisa, M. and Bork, P.
Trends in Biochemical Sciences 33 (3): 101-103. March 2008

No Sec7-homology domain in guanine-nucleotide-exchange factors that act on Ras and Rho.
Ponting, C.P., Bork, P., Schultz, J. and Aravind, L.
Trends in Biochemical Sciences 24 : 177-178. 1 May 1999

Circular permutations of protein sequence: not so rare?
Heinemann, U. and Hahn, M.
Trends in Biochemical Sciences 20 (9): 349-350. 1 January 1995

FMN- or DNA-binding?
Koonin, E. and Bork, P.
Trends in Biochemical Sciences 19 : 234-235. 1 January 1994

The modular structure of NifU proteins.
Ouzounis, C., Bork, P. and Sander, C.
Trends in Biochemical Sciences 19 : 199-200. 1 January 1994

Editorial

XplorMed: a tool for exploring MEDLINE abstracts.
Perez-Iratxeta, C., Bork, P. and Andrade, M.A.
Trends in Biochemical Sciences 26 (9): 573-575. 1 January 2001

GRAM, a novel domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins.
Doerks, T., Strauss, M., Brendel, M. and Bork, P.
Trends in Biochemical Sciences 25 (10): 483-485. 1 October 2000

Comment

Turning science into cover art.
Dauben, H., Matic, I., Kidmose, R.T., Pedersen, B.P., Saha, T., Di Virgilio, M. and Sung, J.H.
Trends in Biochemical Sciences 48 (12): 1009-1011. December 2023

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