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Netboost: boosting-supported network analysis improves high-dimensional omics prediction in acute myeloid leukemia and Huntington's disease.
Schlosser, P., Knaus, J., Schmutz, M., Döhner, K., Plass, C., Bullinger, L., Claus, R., Binder, H., Lübbert, M. and Schumacher, M.
IEEE/ACM Transactions on Computational Biology and Bioinformatics 18 (6): 2635-2648. 1 November 2021

Using unlabeled data to discover bivariate causality with deep restricted Boltzmann machines.
Sokolovska, N., Permiakova, O., Forslund, K. and Zucker, J.D.
IEEE/ACM Transactions on Computational Biology and Bioinformatics 17 (1): 358-364. January 2020