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SODAR: managing multiomics study data and metadata.
Nieminen, M., Stolpe, O., Kuhring, M., Weiner, J., Pett, P., Beule, D. and Holtgrewe, M.
GigaScience 12 : giad052. 27 July 2023

Spacemake: processing and analysis of large-scale spatial transcriptomics data.
Sztanka-Toth, T.R., Jens, M., Karaiskos, N. and Rajewsky, N.
GigaScience 11 : giac064. 19 July 2022

PiGx: reproducible genomics analysis pipelines with GNU Guix.
Wurmus, R., Uyar, B., Osberg, B., Franke, V., Gosdschan, A., Wreczycka, K., Ronen, J. and Akalin, A.
GigaScience 7 (12): giy123. 1 December 2018