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SODAR: managing multiomics study data and metadata.
Nieminen, M. and Stolpe, O. and Kuhring, M. and Weiner, J. and Pett, P. and Beule, D. and Holtgrewe, M.
GigaScience 12 : giad052. 27 July 2023

Spacemake: processing and analysis of large-scale spatial transcriptomics data.
Sztanka-Toth, T.R. and Jens, M. and Karaiskos, N. and Rajewsky, N.
GigaScience 11 : giac064. 19 July 2022

PiGx: reproducible genomics analysis pipelines with GNU Guix.
Wurmus, R. and Uyar, B. and Osberg, B. and Franke, V. and Gosdschan, A. and Wreczycka, K. and Ronen, J. and Akalin, A.
GigaScience 7 (12): giy123. 1 December 2018