2025

Sensitive dissection of a genomic regulatory landscape using bulk and targeted single-cell activation.
Vučićević, Dubravka ORCID: https://orcid.org/0000-0002-1162-6709, Hsu, Che-Wei ORCID: https://orcid.org/0000-0003-3709-9748, Lopez Zepeda, Lorena Sofia ORCID: https://orcid.org/0000-0001-9764-0984, Burkert, Martin ORCID: https://orcid.org/0000-0002-6721-9985, Hirsekorn, Antje, Bilić, Ilija ORCID: https://orcid.org/0000-0002-2730-1634, Kastelić, Nicolai, Landthaler, Markus ORCID: https://orcid.org/0000-0002-1075-8734, Lacadie, Scott Allen ORCID: https://orcid.org/0000-0002-0893-5340 and Ohler, Uwe ORCID: https://orcid.org/0000-0002-0881-3116
Cell Genomics 5 (10): 100984. 8 October 2025

2023

Mutational topography reflects clinical neuroblastoma heterogeneity.
Rodriguez-Fos, E. ORCID: https://orcid.org/0000-0002-2555-0178, Planas-Fèlix, M., Burkert, M. ORCID: https://orcid.org/0000-0002-6721-9985, Puiggròs, M., Toedling, J. ORCID: https://orcid.org/0000-0003-1471-1295, Thiessen, N., Blanc, E. ORCID: https://orcid.org/0000-0002-4369-0254, Szymansky, A. ORCID: https://orcid.org/0000-0003-4797-4526, Hertwig, F. ORCID: https://orcid.org/0000-0003-4784-6516, Ishaque, N. ORCID: https://orcid.org/0000-0002-8426-901X, Beule, D. ORCID: https://orcid.org/0000-0002-3284-0632, Torrents, D., Eggert, A., Koche, R.P., Schwarz, R.F. ORCID: https://orcid.org/0000-0001-9155-4268, Haase, K. ORCID: https://orcid.org/0000-0002-0944-5618, Schulte, J.H. ORCID: https://orcid.org/0000-0003-0671-1201 and Henssen, A.G. ORCID: https://orcid.org/0000-0003-1534-778X
Cell Genomics 3 (10): 100402. 11 October 2023

Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures.
Rausch, T., Snajder, R., Leger, A., Simovic, M., Giurgiu, M. ORCID: https://orcid.org/0000-0001-5007-7442, Villacorta, L., Henssen, A.G. ORCID: https://orcid.org/0000-0003-1534-778X, Fröhling, S., Stegle, O., Birney, E., Bonder, M.J. ORCID: https://orcid.org/0000-0002-8431-3180, Ernst, A. and Korbel, J.O.
Cell Genomics 3 (4): 100281. 12 April 2023

Altered and allele-specific open chromatin landscape reveals epigenetic and genetic regulators of innate immunity in COVID-19.
Zhang, B., Zhang, Z., Koeken, V.A.C.M., Kumar, S., Aillaud, M., Tsay, H.C., Liu, Z., Kraft, A.R.M., Soon, C.F., Odak, I., Bošnjak, B., Vlot, A. ORCID: https://orcid.org/0000-0001-9538-987X, Swertz, M.A., Ohler, U. ORCID: https://orcid.org/0000-0002-0881-3116, Geffers, R., Illig, T., Huehn, J., Saliba, A.E., Sander, L.E., Förster, R., Xu, C.J., Cornberg, M., Schulte, L.N. and Li, Y.
Cell Genomics 3 (2): 100232. 8 February 2023

2022

Type 1 diabetes risk genes mediate pancreatic beta cell survival in response to proinflammatory cytokines.
Benaglio, P., Zhu, H., Okino, M.L., Yan, J., Elgamal, R., Nariai, N., Beebe, E., Korgaonkar, K., Qiu, Y., Donovan, M.K.R., Chiou, J., Wang, G., Newsome, J., Kaur, J., Miller, M., Preissl, S., Corban, S., Aylward, A., Taipale, J., Ren, B., Frazer, K.A., Sander, M. ORCID: https://orcid.org/0000-0001-5308-7785 and Gaulton, K.J.
Cell Genomics 2 (12): 100214. 14 December 2022

Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean.
Delmont, T.O., Gaia, M., Hinsinger, D.D., Frémont, P., Vanni, C., Fernandez-Guerra, A., Eren, A.M., Kourlaiev, A., d'Agata, L., Clayssen, Q., Villar, E., Labadie, K., Cruaud, C., Poulain, J., Da Silva, C., Wessner, M., Noel, B., Aury, J.M., de Vargas, C., Bowler, C., Karsenti, E., Pelletier, E., Wincker, P. and Jaillon, O.
Cell Genomics 2 (5): 100123. 11 May 2022

Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos.
McGarvey, A.C. ORCID: https://orcid.org/0000-0003-3838-1139, Kopp, W. ORCID: https://orcid.org/0000-0003-0376-0032, Vučićević, D. ORCID: https://orcid.org/0000-0002-1162-6709, Mattonet, K. ORCID: https://orcid.org/0000-0002-9705-8086, Kempfer, R. ORCID: https://orcid.org/0000-0002-8588-8576, Hirsekorn, A., Bilić, I. ORCID: https://orcid.org/0000-0002-2730-1634, Gil, M. ORCID: https://orcid.org/0000-0002-3885-7806, Trinks, A. ORCID: https://orcid.org/0000-0001-9983-1506, Merks, A.M. ORCID: https://orcid.org/0000-0001-5677-7204, Panáková, D. ORCID: https://orcid.org/0000-0002-8739-6225, Pombo, A. ORCID: https://orcid.org/0000-0002-7493-6288, Akalin, A. ORCID: https://orcid.org/0000-0002-0468-0117, Junker, J.P. ORCID: https://orcid.org/0000-0002-2826-8290, Stainier, D.Y.R. ORCID: https://orcid.org/0000-0002-0382-0026, Garfield, D. ORCID: https://orcid.org/0000-0002-8790-797X, Ohler, U. ORCID: https://orcid.org/0000-0002-0881-3116 and Lacadie, S.A. ORCID: https://orcid.org/0000-0002-0893-5340
Cell Genomics 2 (1): 100083. 13 January 2022