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Consensus statement on mass spectrometry-based proteomic analysis of cardiac tissue

Item Type:Review
Title:Consensus statement on mass spectrometry-based proteomic analysis of cardiac tissue
Creators: Lundby, Alicia ORCID logoORCID: https://orcid.org/0000-0002-1612-6041, Van Eyk, Jennifer E. ORCID logoORCID: https://orcid.org/0000-0001-9050-148X, Mayr, Manuel ORCID logoORCID: https://orcid.org/0000-0002-0597-829X, White, Melanie Y. ORCID logoORCID: https://orcid.org/0000-0003-2571-2816, Kirk, Jonathan A., Achter, Jonathan S. ORCID logoORCID: https://orcid.org/0000-0002-1587-622X, Fert-Bober, Justyna, Wierer, Michael ORCID logoORCID: https://orcid.org/0000-0002-0356-5571, Mertins, Philipp ORCID logoORCID: https://orcid.org/0000-0002-2245-528X, Lam, Maggie P.Y., Humphrey, Sean J. ORCID logoORCID: https://orcid.org/0000-0002-2666-9744, Lau, Edward, Gramolini, Anthony O. ORCID logoORCID: https://orcid.org/0000-0003-1109-2070, Ge, Ying ORCID logoORCID: https://orcid.org/0000-0001-5211-6812 and Gundry, Rebekah L. ORCID logoORCID: https://orcid.org/0000-0002-9263-833X
Abstract:Mass spectrometry-based cardiac proteomics provides direct molecular insight into cardiac physiology and disease. While plasma proteomics has advanced biomarker discovery, the analysis of cardiac tissue is essential for mechanistic understanding and therapeutic target identification; however, proteomic investigation of cardiac tissue faces unique challenges, including limited sample availability, regional heterogeneity, variability in collection and processing, and inconsistent reporting practices that hinder reproducibility and data integration. Here, we provide a practical framework for designing and conducting mass spectrometry-based proteomic studies of cardiac tissue and primary cardiac cells. We outline best practices and key considerations for sample handling, experimental design, data acquisition, quality control and statistical analysis. This guideline aims to support cardiac researchers in generating robust and reproducible proteomics datasets that advance our understanding of cardiac biology in both physiological and pathological contexts.
Keywords:Biomarkers, Consensus, Heart Diseases, Mass Spectrometry, Myocardium, Proteomics, Animals
Source:Nature Cardiovascular Research
ISSN:2731-0590
Publisher:Springer Nature
Volume:5
Number:6
Page Range:526-540
Date:June 2026
Official Publication:https://doi.org/10.1038/s44161-026-00824-4
PubMed:View item in PubMed

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