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Combined RNAi and localization for functionally dissecting long non-coding RNAs data

Item Type:Dataset
Title:Combined RNAi and localization for functionally dissecting long non-coding RNAs data
Creators Name:Chakraborty, Debojyoti, Buchholz, Frank, Kappei, Dennis, Theis, Mirko, Nitzsche, Anja, Ding, Li, Paszkowski-Rogacz, Maciej, Surendranath, Vineeth, Berger, Nicolas, Schulz, Herbert, Saar, Kathrin, Hubner, Norbert and Janosch, Stephan
Abstract:Whereas methods to comprehensively study cellular roles of protein-coding genes are available, techniques to systematically investigate long noncoding RNAs (lncRNAs), which have been implicated in diverse biological pathways, are limited. Here we report combined knockdown and localization analysis of noncoding RNAs (c-KLAN) that merges functional characterization and localization approaches to study lncRNAs. Using this technique we identified transcripts that regulate mouse embryonic stem cell identity.
Source:Edmond
Publisher:Max Planck Digital Library
Date:9 January 2025
Official Publication:https://doi.org/10.17617/3.BDDOHF
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