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Innovative in vivo imaging and single cell expression from tumor bulk and corpus callosum reveal glioma stem cells with unique regulatory programs

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Item Type:Article
Title:Innovative in vivo imaging and single cell expression from tumor bulk and corpus callosum reveal glioma stem cells with unique regulatory programs
Creators Name:Dos Santos, Natalia, Aquino, Aline, Preußer, Friedrich, Rusak, Fabio Rojas, Jandrey, Elisa Helena Farias, Uno, Miyuki, Furuya, Tatiane Katsue, Lancellotti, Carmen Lucia Penteado, Maldaun, Marcos Vinicius Calfat, Chammas, Roger, Preibisch, Stephan, Camargo, Anamaria Aranha, Masotti, Cibele and Costa, Erico Tosoni
Abstract:BACKGROUND/OBJECTIVES: High-grade gliomas (HGGs), including glioblastomas, are among the most aggressive brain tumors due to their high intratumoral heterogeneity and extensive infiltration. Glioma stem-like cells (GSCs) frequently invade along white matter tracts such as the corpus callosum, but the molecular programs driving this region-specific invasion remain poorly defined. The aim of this study was to identify transcriptional signatures associated with GSC infiltration into the corpus callosum. METHODS: We established an orthotopic xenograft model by implanting fluorescently labeled human GSCs into nude mouse brains. Tumor growth and invasion patterns were assessed using tissue clearing, light-sheet fluorescence microscopy, and histological analyses. To characterize region-specific molecular profiles, we performed microfluidic-based single-cell RNA expression analysis of 48 invasion- and stemness-related genes in cells isolated from the tumor bulk (TB) and corpus callosum (CC). RESULTS: By six weeks post-implantation, GSCs displayed marked tropism for the corpus callosum, with distinct infiltration patterns captured by three-dimensional imaging. Single-cell gene expression profiling revealed significant differences in 7 of the 48 genes (14.6%) between TB- and CC-derived GSCs. These genes—NES, CCND1, GUSB, NOTCH1, E2F1, EGFR, and TGFB1—collectively defined a “corpus callosum invasion signature” (CC-Iv). CC-derived cells showed a unimodal, high-expression profile of CC-Iv genes, whereas TB cells exhibited bimodal distributions, suggesting heterogeneous transcriptional states. Importantly, higher CC-Iv expression correlated with worse survival in patients with low-grade gliomas. CONCLUSIONS: This multimodal approach identified a corpus callosum-specific invasion signature in glioma stem-like cells, revealing how local microenvironmental cues shape transcriptional reprogramming during infiltration. These findings provide new insights into the spatial heterogeneity of gliomas and highlight potential molecular targets for therapies designed to limit tumor spread through white matter tracts.
Keywords:Glioblastoma, Glioma Stem-Like Cells, Tumor Invasion, Corpus Callosum, Intratumoral Heterogeneity, Single-Cell RNA Analysis, Light-Sheet Fluorescence Microscopy, Animals, Mice
Source:Cancers
ISSN:2072-6694
Publisher:MDPI
Volume:17
Number:23
Page Range:3851
Date:December 2025
Official Publication:https://doi.org/10.3390/cancers17233851
PubMed:View item in PubMed
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