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Endogenous SNAP-tagging of Munc13-1 for monitoring synapse nanoarchitecture

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Item Type:Article
Title:Endogenous SNAP-tagging of Munc13-1 for monitoring synapse nanoarchitecture
Creators Name:Kowald, M., Bachollet, S.P.J.T., Benseler, F., Steinecker, M., Boll, M., Kaushik, S., Soykan, T., Sun, S., Birke, R., Ilic, D., Brose, N., Hörnberg, H., Lehmann, M., Rizzoli, S.O., Broichhagen, J. and Lipstein, N.
Abstract:Synaptic function is governed by highly regulated protein machineries, whose abundance and spatial localization change continually. Studies to determine dynamic changes in synaptic protein nanoarchitecture typically rely on immunolabeling or on the expression of fluorescent proteins. The former employs chemical fluorophores and signal amplification but requires fixation. The latter enables monitoring of proteins by live microscopy but uses suboptimal fluorophores. Self-labeling tags have been introduced to combine the advantages of these two approaches, and here we introduce a knock-in mouse line where the essential presynaptic protein Munc13–1 is endogenously fused to the self-labeling SNAP tag. We demonstrate efficient Munc13–1-SNAP labeling in fixed cultured neurons and in brain sections by various SNAP dyes, as well as by a novel far-red and cell impermeable compound, SBG-SiR-d12. We introduce and characterize SBG-SiR-d12 as a highly efficient dye for SNAP-tag labeling of extracellular epitopes and of intracellular proteins such as Munc13–1 in fixed and permeabilized tissue. Finally, we show that Munc13–1-SNAP can be labeled in living neurons and monitored through live-cell imaging using confocal and super resolution microscopy. We conclude that the Unc13a(SNAP) mouse line is a useful tool for labeling the presynaptic compartment and for the analysis of presynaptic nanoarchitectural dynamics, with potential for wide adoption.
Keywords:Active Zone, Munc13-1, Unc13a, Synapse, SNAP Tag, SBG-SiR-d12, Animals, Mice
Source:JACS Au
ISSN:2691-3704
Publisher:American Chemical Society
Date:22 May 2025
Official Publication:https://doi.org/10.1021/jacsau.4c00946

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