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Stable Hrd1 tetramers at the heart of the retrotranslocon in living cells

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Item Type:Preprint
Title:Stable Hrd1 tetramers at the heart of the retrotranslocon in living cells
Creators: Abel, Tim, Subramanya, Shubha ORCID logoORCID: https://orcid.org/0009-0002-6976-575X, Liu, Brandon M. ORCID logoORCID: https://orcid.org/0000-0002-2749-8182, Schütz, Anja ORCID logoORCID: https://orcid.org/0000-0002-0606-2574, Lippincott-Schwartz, Jennifer, Neal, Sonya E. ORCID logoORCID: https://orcid.org/0000-0002-9618-8428, Sommer, Thomas ORCID logoORCID: https://orcid.org/0000-0001-9990-5202 and Obara, Christopher J. ORCID logoORCID: https://orcid.org/0000-0003-1028-6076
Abstract:Terminally misfolded or damaged proteins in the endoplasmic reticulum (ER) are degraded by the proteasome in a process termed endoplasmic reticulum-associated degradation (ERAD). To reach the proteasome in the cytosol, cargo proteins must be dislocated across the ER lipid bilayer. Retrograde transport is performed by a set of membrane-spanning multi-protein complexes that are notoriously difficult to study. Despite decades of genetic and biochemical analysis, there is little consensus regarding its molecular mechanism. Here, we characterize the dynamic assembly of the mammalian Hrd1 complex, one of the most thoroughly studied mammalian dislocons, using in situ multicolor single-particle tracking. Surprisingly, quantitative dual-color tracking reveals that the majority of Hrd1 is assembled into stable homo-tetramers in situ. Using a herein developed single-molecule assay based on binding competition, we show that this tetramerization is driven by a short stretch (Hrd1, HAF-H) within the cytosolic domain of Hrd1. Combining classical purification assays, quantitative imaging, and structural predictions, we demonstrate that Hrd1 forms a highly stable tetrameric helix bundle via a conserved hydrophobic coiled-coil motif. While higher order assemblies of Hrd1 have been previously implicated, this work offers direct evidence of their role in dislocation, demonstrating that quantitative single-molecule imaging can yield information on species previously hidden from classical biochemistry.
Source:bioRxiv
Publisher:Cold Spring Harbor Laboratory Press
Article Number:2026.06.16.732623
Date:17 June 2026
Official Publication:https://doi.org/10.64898/2026.06.16.732623

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