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Ribo-seQC: comprehensive analysis of cytoplasmic and organellar ribosome profiling data

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Item Type:Preprint
Title:Ribo-seQC: comprehensive analysis of cytoplasmic and organellar ribosome profiling data
Creators Name:Calviello, L. and Sydow, D. and Harnett, D. and Ohler, U.
Abstract:Summary: Ribosome profiling enables genome-wide analysis of translation with unprecedented resolution. We present Ribo-seQC, a versatile tool for the comprehensive analysis of Ribo-seq data, providing in-depth insights on data quality and translational profiles for cytoplasmic and organelle ribosomes. Ribo-seQC automatically generates platform-independent HTML reports, offering a detailed and easy-to-share basis for collaborative Ribo-seq projects. Availability: Ribo-seQC is available at https://github.com/ohlerlab/RiboseQC and submitted to Bioconductor. Contact: uwe.ohler{at}mdc-berlin.de
Source:bioRxiv
Publisher:Cold Spring Harbor Laboratory Press (U.S.A.)
Article Number:601468
Date:8 April 2019
Official Publication:https://doi.org/10.1101/601468

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