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| Item Type: | Article |
|---|---|
| Title: | An overview of the analysis of next generation sequencing data |
| Creators Name: | Gogol-Doering, A. and Chen, W. |
| Abstract: | Next generation sequencing is a common and versatile tool for biological and medical research. We describe the basic steps for analyzing next generation sequencing data, including quality checking and mapping to a reference genome. We also explain the further data analysis for three common applications of next generation sequencing: variant detection, RNA-seq, and ChIP-seq. |
| Keywords: | Next Generation Sequencing, Read Mapping, Variant Detection, RNA-seq, ChIP-seq , Animals |
| Source: | Methods in Molecular Biology |
| Series Name: | Methods in Molecular Biology |
| Title of Book: | Next generation microarray bioinformatics : methods and protocols |
| ISSN: | 1064-3745 |
| ISBN: | 978-1-61779-399-8 |
| Publisher: | Springer / Humana Press |
| Volume: | 802 |
| Page Range: | 249-257 |
| Number of Pages: | 401 |
| Date: | 2012 |
| Official Publication: | https://doi.org/10.1007/978-1-61779-400-1_16 |
| PubMed: | View item in PubMed |
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