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Targeting PRMT5 inhibitor-induced adaptation in pancreatic cancer with the RBM39 degrader indisulam

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Item Type:Article
Title:Targeting PRMT5 inhibitor-induced adaptation in pancreatic cancer with the RBM39 degrader indisulam
Creators: Spielmann, Valentina ORCID logoORCID: https://orcid.org/0009-0004-7138-4360, Buchloh, Jonas ORCID logoORCID: https://orcid.org/0000-0002-9820-3054, Selcen, Selen ORCID logoORCID: https://orcid.org/0009-0006-4006-4369, Schneider, Carolin ORCID logoORCID: https://orcid.org/0000-0003-3539-9026, Jansari, Shaishavi ORCID logoORCID: https://orcid.org/0009-0002-0495-3012, Fang, Xin ORCID logoORCID: https://orcid.org/0000-0003-2098-6623, Duan, Ningjun ORCID logoORCID: https://orcid.org/0000-0001-6316-3796, Demirdizen, Engin ORCID logoORCID: https://orcid.org/0009-0004-9346-7458, Krauß, Lukas ORCID logoORCID: https://orcid.org/0000-0003-0062-8685, Eggert, Jessica ORCID logoORCID: https://orcid.org/0009-0006-1588-6205, Siegfried, Geraldine ORCID logoORCID: https://orcid.org/0000-0002-6346-5206, Fedou, Sandrine ORCID logoORCID: https://orcid.org/0000-0003-3952-607X, Lenz, Christof ORCID logoORCID: https://orcid.org/0000-0002-0946-8166, Wieland, Lena ORCID logoORCID: https://orcid.org/0009-0006-5969-1012, Conradi, Lena-Christin ORCID logoORCID: https://orcid.org/0000-0002-9488-1018, Reichert, Maximilian ORCID logoORCID: https://orcid.org/0000-0002-8611-5639, Ellenrieder, Volker ORCID logoORCID: https://orcid.org/0000-0001-9981-8571, Ghadimi, Michael ORCID logoORCID: https://orcid.org/0000-0001-8208-1526, Grade, Marian ORCID logoORCID: https://orcid.org/0000-0001-9527-5362, Hessmann, Elisabeth ORCID logoORCID: https://orcid.org/0000-0002-9462-1291, Khatib, Abdel-Majid ORCID logoORCID: https://orcid.org/0000-0001-6957-0384, Braun, Christian J. ORCID logoORCID: https://orcid.org/0000-0003-1704-6219, Wegwitz, Florian ORCID logoORCID: https://orcid.org/0000-0003-0750-6998, Saur, Dieter ORCID logoORCID: https://orcid.org/0000-0001-5874-0210, Wirth, Matthias ORCID logoORCID: https://orcid.org/0000-0002-8340-0872 and Schneider, Günter ORCID logoORCID: https://orcid.org/0000-0003-1840-4508
Abstract:Pancreatic ductal adenocarcinoma (PDAC) remains a formidable clinical challenge. Next-generation protein arginine methyltransferase 5 (PRMT5) inhibitors show promising clinical results in a subset of PDACs with codeletion of the tumor-suppressor CDKN2A and the methylthioadenosine phosphorylase (MTAP) gene, but resistance limits their efficacy. Our study suggests that compensatory spliceosomal reprogramming contributes to adaptation to PRMT5 inhibition. Through comprehensive molecular profiling, we demonstrate that PRMT5 inhibitors induce upregulation of RNA-binding proteins, including RNA-binding protein 39 (RBM39). We investigated whether this response could be therapeutically leveraged by combining PRMT5 inhibition with indisulam-mediated RBM39 degradation, which yielded synergistic activity in cellular model systems. The combination strategy significantly enhanced apoptotic cell death and suppressed tumor outgrowth in resistance assays compared with single-agent treatments. Multiomics analysis revealed concomitant suppression of DNA repair and metabolic pathways. Collectively, our work support spliceosomal rewiring as a candidate adaptive response to PRMT5 inhibition and nominates RBM39 as a candidate therapeutic vulnerability, thereby supporting further evaluation of dual targeting of the splicing machinery. SIGNIFICANCE: Our study suggests that compensatory spliceosomal reprogramming occurs in response to PRMT5 inhibition. We investigated this vulnerability by combining PRMT5 inhibition with indisulam-mediated RBM39 degradation, which yielded synergistic antitumor activity in selected cellular PDAC models.
Keywords:Apoptosis, Neoplastic Gene Expression Regulation, Pancreatic Ductal Carcinoma, Pancreatic Neoplasms, Protein-Arginine N-Methyltransferases, RNA-Binding Proteins, Spliceosomes, Tumor Cell Line, Xenograft Model Antitumor Assays, Animals, Mice
Source:Cancer Research Communications
ISSN:2767-9764
Publisher:American Association for Cancer Research
Volume:6
Number:9
Page Range:2039-2055
Date:1 September 2026
Official Publication:https://doi.org/10.1158/2767-9764.crc-25-0670
PubMed:View item in PubMed
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