An overview of the analysis of next generation sequencing data

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Item Type:	Article
Title:	An overview of the analysis of next generation sequencing data
Creators Name:	Gogol-Doering, A. and Chen, W.
Abstract:	Next generation sequencing is a common and versatile tool for biological and medical research. We describe the basic steps for analyzing next generation sequencing data, including quality checking and mapping to a reference genome. We also explain the further data analysis for three common applications of next generation sequencing: variant detection, RNA-seq, and ChIP-seq.
Keywords:	Next Generation Sequencing, Read Mapping, Variant Detection, RNA-seq, ChIP-seq , Animals
Source:	Methods in Molecular Biology
Series Name:	Methods in Molecular Biology
Title of Book:	Next generation microarray bioinformatics : methods and protocols
ISSN:	1064-3745
ISBN:	978-1-61779-399-8
Publisher:	Springer / Humana Press
Volume:	802
Page Range:	249-257
Number of Pages:	401
Date:	2012
Official Publication:	https://doi.org/10.1007/978-1-61779-400-1_16
PubMed:	View item in PubMed

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