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Data preparation protocol for low signal-to-noise ratio fluorine-19 MRI

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Item Type:Article
Title:Data preparation protocol for low signal-to-noise ratio fluorine-19 MRI
Creators Name:Starke, L. and Niendorf, T. and Waiczies, S.
Abstract:Fluorine-19 MRI shows great promise for a wide range of applications including renal imaging, yet the typically low signal-to-noise ratios and sparse signal distribution necessitate a thorough data preparation.This chapter describes a general data preparation workflow for fluorine MRI experiments. The main processing steps are: (1) estimation of noise level, (2) correction of noise-induced bias and (3) background subtraction. The protocol is supplemented by an example script and toolbox available online.This chapter is based upon work from the COST Action PARENCHIMA, a community-driven network funded by the European Cooperation in Science and Technology (COST) program of the European Union, which aims to improve the reproducibility and standardization of renal MRI biomarkers. This analysis protocol chapter is complemented by two separate chapters describing the basic concept and experimental procedure.
Keywords:Magnetic Resonance Imaging (MRI), Fluorine, Data Preparation, Animals, Mice, Rats
Source:Methods in Molecular Biology
Series Name:Methods in Molecular Biology
Title of Book:Preclinical MRI of the kidney : methods and protocols
ISSN:1064-3745
ISBN:978-1-0716-0977-4
Publisher:Springer / Humana Press
Volume:2216
Page Range:711-722
Date:2021
Official Publication:https://doi.org/10.1007/978-1-0716-0978-1_43
PubMed:View item in PubMed
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https://edoc.mdc-berlin.de/19922/Book

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